# Licensed under a 3-clause BSD style license - see LICENSE.rst

##############################################################################
# Note: this file exists only for backward-compatibility purposes - the      #
#       contents have been moved to the separate astropy-helpers package,    #
#       located at https://github.com/astropy/astropy-helpers. Any new       #
#       development or bug fixes should be done there.                       #
##############################################################################

"""
This module contains a number of utilities for use during
setup/build/packaging that are useful to astropy as a whole.
"""



import collections
import errno
import imp
import inspect
import os
import re
import shlex
import shutil
import subprocess
import sys
import textwrap
import warnings

from distutils import log, ccompiler, sysconfig
from distutils.cmd import DistutilsOptionError
from distutils.dist import Distribution
from distutils.errors import DistutilsError
from distutils.core import Extension
from distutils.core import Command
from distutils.command.sdist import sdist as DistutilsSdist
from setuptools.command.build_ext import build_ext as SetuptoolsBuildExt
from setuptools.command.build_py import build_py as SetuptoolsBuildPy
from setuptools.command.install import install as SetuptoolsInstall
from setuptools.command.install_lib import install_lib as SetuptoolsInstallLib

from setuptools.command.register import register as SetuptoolsRegister
from setuptools import find_packages

from .tests.helper import astropy_test
from .utils import silence
from .utils.compat.misc import invalidate_caches
from .utils.misc import walk_skip_hidden
from .utils.exceptions import AstropyDeprecationWarning

from .extern import six


try:
    import Cython
    HAVE_CYTHON = True
except ImportError:
    HAVE_CYTHON = False


try:
    import sphinx
    from sphinx.setup_command import BuildDoc as SphinxBuildDoc
    HAVE_SPHINX = True
except ImportError:
    HAVE_SPHINX = False
except SyntaxError:  # occurs if markupsafe is recent version, which doesn't support Python 3.2
    HAVE_SPHINX = False


PY3 = sys.version_info[0] >= 3


# This adds a new keyword to the setup() function
Distribution.skip_2to3 = []


_adjusted_compiler = False
def adjust_compiler(package):
    """
    This function detects broken compilers and switches to another.  If
    the environment variable CC is explicitly set, or a compiler is
    specified on the commandline, no override is performed -- the purpose
    here is to only override a default compiler.

    The specific compilers with problems are:

        * The default compiler in XCode-4.2, llvm-gcc-4.2,
          segfaults when compiling wcslib.

    The set of broken compilers can be updated by changing the
    compiler_mapping variable.  It is a list of 2-tuples where the
    first in the pair is a regular expression matching the version
    of the broken compiler, and the second is the compiler to change
    to.
    """

    compiler_mapping = [
        (b'i686-apple-darwin[0-9]*-llvm-gcc-4.2', 'clang')
        ]

    global _adjusted_compiler
    if _adjusted_compiler:
        return

    # Whatever the result of this function is, it only needs to be run once
    _adjusted_compiler = True

    if 'CC' in os.environ:

        # Check that CC is not set to llvm-gcc-4.2
        c_compiler = os.environ['CC']

        try:
            version = get_compiler_version(c_compiler)
        except OSError:
            msg = textwrap.dedent(
                    """
                    The C compiler set by the CC environment variable:

                        {compiler:s}

                    cannot be found or executed.
                    """.format(compiler=c_compiler))
            log.warn(msg)
            sys.exit(1)

        for broken, fixed in compiler_mapping:
            if re.match(broken, version):
                msg = textwrap.dedent(
                    """Compiler specified by CC environment variable
                    ({compiler:s}:{version:s}) will fail to compile {pkg:s}.
                    Please set CC={fixed:s} and try again.
                    You can do this, for example, by running:

                        CC={fixed:s} python setup.py <command>

                    where <command> is the command you ran.
                    """.format(compiler=c_compiler, version=version,
                               pkg=package, fixed=fixed))
                log.warn(msg)
                sys.exit(1)

        # If C compiler is set via CC, and isn't broken, we are good to go. We
        # should definitely not try accessing the compiler specified by
        # ``sysconfig.get_config_var('CC')`` lower down, because this may fail
        # if the compiler used to compile Python is missing (and maybe this is
        # why the user is setting CC). For example, the official Python 2.7.3
        # MacOS X binary was compled with gcc-4.2, which is no longer available
        # in XCode 4.
        return

    if get_distutils_build_option('compiler'):
        return

    compiler_type = ccompiler.get_default_compiler()

    if compiler_type == 'unix':

        # We have to get the compiler this way, as this is the one that is
        # used if os.environ['CC'] is not set. It is actually read in from
        # the Python Makefile. Note that this is not necessarily the same
        # compiler as returned by ccompiler.new_compiler()
        c_compiler = sysconfig.get_config_var('CC')

        try:
            version = get_compiler_version(c_compiler)
        except OSError:
            msg = textwrap.dedent(
                    """
                    The C compiler used to compile Python {compiler:s}, and
                    which is normally used to compile C extensions, is not
                    available. You can explicitly specify which compiler to
                    use by setting the CC environment variable, for example:

                        CC=gcc python setup.py <command>

                    or if you are using MacOS X, you can try:

                        CC=clang python setup.py <command>
                    """.format(compiler=c_compiler))
            log.warn(msg)
            sys.exit(1)


        for broken, fixed in compiler_mapping:
            if re.match(broken, version):
                os.environ['CC'] = fixed
                break


def get_compiler_version(compiler):

    process = subprocess.Popen(
        shlex.split(compiler) + ['--version'], stdout=subprocess.PIPE)

    output = process.communicate()[0].strip()
    try:
        version = output.split()[0]
    except IndexError:
        return 'unknown'

    return version


def get_dummy_distribution():
    """Returns a distutils Distribution object used to instrument the setup
    environment before calling the actual setup() function.
    """

    global _registered_commands

    if _registered_commands is None:
        raise RuntimeError('astropy.setup_helpers.register_commands() must be '
                           'called before using '
                           'astropy.setup_helpers.get_dummy_distribution()')

    # Pre-parse the Distutils command-line options and config files to if
    # the option is set.
    dist = Distribution({'script_name': os.path.basename(sys.argv[0]),
                         'script_args': sys.argv[1:]})
    dist.cmdclass.update(_registered_commands)

    with silence():
        try:
            dist.parse_config_files()
            dist.parse_command_line()
        except (DistutilsError, AttributeError, SystemExit):
            # Let distutils handle DistutilsErrors itself AttributeErrors can
            # get raise for ./setup.py --help SystemExit can be raised if a
            # display option was used, for example
            pass

    return dist


def get_distutils_option(option, commands):
    """ Returns the value of the given distutils option.

    Parameters
    ----------
    option : str
        The name of the option

    commands : list of str
        The list of commands on which this option is available

    Returns
    -------
    val : str or None
        the value of the given distutils option. If the option is not set,
        returns None.
    """

    dist = get_dummy_distribution()

    for cmd in commands:
        cmd_opts = dist.command_options.get(cmd)
        if cmd_opts is not None and option in cmd_opts:
            return cmd_opts[option][1]
    else:
        return None


def get_distutils_build_option(option):
    """ Returns the value of the given distutils build option.

    Parameters
    ----------
    option : str
        The name of the option

    Returns
    -------
    val : str or None
        The value of the given distutils build option. If the option
        is not set, returns None.
    """
    return get_distutils_option(option, ['build', 'build_ext', 'build_clib'])


def get_distutils_install_option(option):
    """ Returns the value of the given distutils install option.

    Parameters
    ----------
    option : str
        The name of the option

    Returns
    -------
    val : str or None
        The value of the given distutils build option. If the option
        is not set, returns None.
    """
    return get_distutils_option(option, ['install'])


def get_distutils_build_or_install_option(option):
    """ Returns the value of the given distutils build or install option.

    Parameters
    ----------
    option : str
        The name of the option

    Returns
    -------
    val : str or None
        The value of the given distutils build or install option. If the
        option is not set, returns None.
    """
    return get_distutils_option(option, ['build', 'build_ext', 'build_clib',
                                         'install'])


def get_compiler_option():
    """ Determines the compiler that will be used to build extension modules.

    Returns
    -------
    compiler : str
        The compiler option specificied for the build, build_ext, or build_clib
        command; or the default compiler for the platform if none was
        specified.

    """

    compiler = get_distutils_build_option('compiler')
    if compiler is None:
        return ccompiler.get_default_compiler()

    return compiler


def get_debug_option():
    """ Determines if the build is in debug mode.

    Returns
    -------
    debug : bool
        True if the current build was started with the debug option, False
        otherwise.

    """

    try:
        from .version import debug as current_debug
    except ImportError:
        current_debug = None

    # Only modify the debug flag if one of the build commands was explicitly
    # run (i.e. not as a sub-command of something else)
    dist = get_dummy_distribution()
    if any(cmd in dist.commands for cmd in ['build', 'build_ext']):
        debug = bool(get_distutils_build_option('debug'))
    else:
        debug = bool(current_debug)

    if current_debug is not None and current_debug != debug:
        build_ext_cmd = dist.get_command_class('build_ext')
        build_ext_cmd.force_rebuild = True

    return debug


_registered_commands = None
def register_commands(package, version, release):
    global _registered_commands

    if _registered_commands is not None:
        return _registered_commands

    _registered_commands = {
        'test': generate_test_command(package),

        # Use distutils' sdist because it respects package_data.
        # setuptools/distributes sdist requires duplication of information in
        # MANIFEST.in
        'sdist': DistutilsSdist,

        # The exact form of the build_ext command depends on whether or not
        # we're building a release version
        'build_ext': generate_build_ext_command(package, release),

        # We have a custom build_py to generate the default configuration file
        'build_py': AstropyBuildPy,

        # Since install can (in some circumstances) be run without
        # first building, we also need to override install and
        # install_lib.  See #2223
        'install': AstropyInstall,
        'install_lib': AstropyInstallLib,

        'register': AstropyRegister
    }

    if HAVE_SPHINX:
        _registered_commands['build_sphinx'] = AstropyBuildSphinx
    else:
        _registered_commands['build_sphinx'] = FakeBuildSphinx

    # Need to override the __name__ here so that the commandline options are
    # presented as being related to the "build" command, for example; normally
    # this wouldn't be necessary since commands also have a command_name
    # attribute, but there is a bug in distutils' help display code that it
    # uses __name__ instead of command_name. Yay distutils!
    for name, cls in list(_registered_commands.items()):
        cls.__name__ = name

    # Add a few custom options; more of these can be added by specific packages
    # later
    for option in [
            ('use-system-libraries',
             "Use system libraries whenever possible", True)]:
        add_command_option('build', *option)
        add_command_option('install', *option)

    return _registered_commands


def generate_test_command(package_name):
    return type(package_name + '_test_command', (astropy_test,),
                {'package_name': package_name})


def generate_build_ext_command(packagename, release):
    """
    Creates a custom 'build_ext' command that allows for manipulating some of
    the C extension options at build time.  We use a function to build the
    class since the base class for build_ext may be different depending on
    certain build-time parameters (for example, we may use Cython's build_ext
    instead of the default version in distutils).

    Uses the default distutils.command.build_ext by default.
    """

    uses_cython = should_build_with_cython(packagename, release)

    if uses_cython:
        from Cython.Distutils import build_ext as basecls
    else:
        basecls = SetuptoolsBuildExt

    attrs = dict(basecls.__dict__)
    orig_run = getattr(basecls, 'run', None)
    orig_finalize = getattr(basecls, 'finalize_options', None)

    def finalize_options(self):
        if orig_finalize is not None:
            orig_finalize(self)

        # Generate
        if self.uses_cython:
            try:
                from Cython import __version__ as cython_version
            except ImportError:
                # This shouldn't happen if we made it this far
                cython_version = None

            if (cython_version is not None and
                    cython_version != self.uses_cython):
                self.force_rebuild = True
                # Update the used cython version
                self.uses_cython = cython_version

        # Regardless of the value of the '--force' option, force a rebuild if
        # the debug flag changed from the last build
        if self.force_rebuild:
            self.force = True

    def run(self):
        # For extensions that require 'numpy' in their include dirs, replace
        # 'numpy' with the actual paths
        np_include = get_numpy_include_path()
        for extension in self.extensions:
            if 'numpy' in extension.include_dirs:
                idx = extension.include_dirs.index('numpy')
                extension.include_dirs.insert(idx, np_include)
                extension.include_dirs.remove('numpy')

            # Replace .pyx with C-equivalents, unless c files are missing
            for jdx, src in enumerate(extension.sources):
                if src.endswith('.pyx'):
                    pyxfn = src
                    cfn = src[:-4] + '.c'
                elif src.endswith('.c'):
                    pyxfn = src[:-2] + '.pyx'
                    cfn = src

                if os.path.isfile(pyxfn):
                    if self.uses_cython:
                        extension.sources[jdx] = pyxfn
                    else:
                        if os.path.isfile(cfn):
                            extension.sources[jdx] = cfn
                        else:
                            msg = (
                                'Could not find C file {0} for Cython file '
                                '{1} when building extension {2}. '
                                'Cython must be installed to build from a '
                                'git checkout'.format(cfn, pyxfn,
                                                      extension.name))
                            raise IOError(errno.ENOENT, msg, cfn)

        if orig_run is not None:
            # This should always be the case for a correctly implemented
            # distutils command.
            orig_run(self)

        # Update cython_version.py if building with Cython
        try:
            from .version import cython_version
        except ImportError:
            cython_version = 'unknown'
        if self.uses_cython and self.uses_cython != cython_version:
            package_dir = os.path.relpath(packagename)
            cython_py = os.path.join(package_dir, 'cython_version.py')
            with open(cython_py, 'w') as f:
                f.write('# Generated file; do not modify\n')
                f.write('cython_version = {0!r}\n'.format(self.uses_cython))

            if os.path.isdir(self.build_lib):
                # The build/lib directory may not exist if the build_py command
                # was not previously run, which may sometimes be the case
                self.copy_file(cython_py,
                               os.path.join(self.build_lib, cython_py),
                               preserve_mode=False)

            invalidate_caches()

        # REMOVE: in astropy 0.5
        if not self.distribution.is_pure() and os.path.isdir(self.build_lib):
            # Finally, generate the default astropy.cfg; this can only be done
            # after extension modules are built as some extension modules
            # include config items.  We only do this if it's not pure python,
            # though, because if it is, we already did it in build_py
            generate_default_config(
                os.path.abspath(self.build_lib),
                self.distribution.packages[0], self)

    attrs['run'] = run
    attrs['finalize_options'] = finalize_options
    attrs['force_rebuild'] = False
    attrs['uses_cython'] = uses_cython

    return type('build_ext', (basecls, object), attrs)


def _get_platlib_dir(cmd):
    plat_specifier = '.{0}-{1}'.format(cmd.plat_name, sys.version[0:3])
    return os.path.join(cmd.build_base, 'lib' + plat_specifier)


class AstropyInstall(SetuptoolsInstall):

    def finalize_options(self):
        build_cmd = self.get_finalized_command('build')
        platlib_dir = _get_platlib_dir(build_cmd)
        self.build_lib = platlib_dir
        SetuptoolsInstall.finalize_options(self)


class AstropyInstallLib(SetuptoolsInstallLib):

    def finalize_options(self):
        build_cmd = self.get_finalized_command('build')
        platlib_dir = _get_platlib_dir(build_cmd)
        self.build_dir = platlib_dir
        SetuptoolsInstallLib.finalize_options(self)


class AstropyBuildPy(SetuptoolsBuildPy):

    def finalize_options(self):
        # Update build_lib settings from the build command to always put
        # build files in platform-specific subdirectories of build/, even
        # for projects with only pure-Python source (this is desirable
        # specifically for support of multiple Python version).
        build_cmd = self.get_finalized_command('build')
        platlib_dir = _get_platlib_dir(build_cmd)

        build_cmd.build_purelib = platlib_dir
        build_cmd.build_lib = platlib_dir
        self.build_lib = platlib_dir

        SetuptoolsBuildPy.finalize_options(self)

    def run_2to3(self, files, doctests=False):
        # Filter the files to exclude things that shouldn't be 2to3'd
        skip_2to3 = self.distribution.skip_2to3
        filtered_files = []
        for file in files:
            for package in skip_2to3:
                if file[len(self.build_lib) + 1:].startswith(package):
                    break
            else:
                filtered_files.append(file)

        SetuptoolsBuildPy.run_2to3(self, filtered_files, doctests)

    def run(self):
        # first run the normal build_py
        SetuptoolsBuildPy.run(self)

        pkgnm = self.distribution.packages[0]

        # REMOVE: in astropy 0.5
        if self.distribution.is_pure():
            # Generate the default astropy.cfg - we only do this here if it's
            # pure python.  Otherwise, it'll happen at the end of build_exp
            generate_default_config(
                os.path.abspath(self.build_lib),
                pkgnm, self)

        # Also copy over *only* the pytest part of setup.cfg.  This is necessary
        # because the astropy.test() function needs this information to know how
        # it should be configured.
        p = six.moves.configparser.SafeConfigParser()
        p.add_section('pytest')

        pkgnmsection = r'"' + pkgnm + r'[\/]'
        for k, (fnsrc, v) in six.iteritems(self.distribution.command_options['pytest']):
            # also need to adjust any part of the pytest section that contains
            # reference to the package directory (e.g., "astropy" for the core
            # package), because this file is actually written *into* that
            # directory.
            if pkgnmsection in v:
                v = v.replace(pkgnmsection, '"')
            p.set('pytest', k, v)

        with open(os.path.join(self.build_lib, pkgnm, 'pytest.ini'), 'w') as f:
            p.write(f)


# REMOVE: in astropy 0.5
def generate_default_config(build_lib, package, command):
    config_path = os.path.relpath(package)
    filename = os.path.join(config_path, package + '.cfg')

    if os.path.exists(filename):
        return

    log.info('generating default {0}.cfg file in {1}'.format(package, filename))

    if PY3:
        builtins = 'builtins'
    else:
        builtins = '__builtin__'

    # astropy may have been built with a numpy that setuptools
    # downloaded and installed into the current directory for us.
    # Therefore, we need to extend the sys.path of the subprocess
    # that's generating the config file, with the sys.path of this
    # process.

    subproccode = (
        'import sys; sys.path.extend({paths!r});'
        'import {builtins};{builtins}._ASTROPY_SETUP_ = True;'
        'from astropy.config.configuration import generate_all_config_items;'
        'generate_all_config_items({pkgnm!r}, True, filename={filenm!r})')
    subproccode = subproccode.format(builtins=builtins,
                                     pkgnm=package,
                                     filenm=os.path.abspath(filename),
                                     paths=sys.path)

    # Note that cwd=build_lib--we're importing astropy from the build/ dir
    # but using the astropy/ source dir as the config directory
    proc = subprocess.Popen([sys.executable, '-c', subproccode],
                             stdout=subprocess.PIPE, stderr=subprocess.PIPE,
                             cwd=build_lib)
    stdout, stderr = proc.communicate()

    if proc.returncode == 0 and os.path.exists(filename):
        default_cfg = os.path.relpath(filename)
        command.copy_file(default_cfg,
                          os.path.join(command.build_lib, default_cfg),
                          preserve_mode=False)
    else:
        msg = ('Generation of default configuration item failed! Stdout '
               'and stderr are shown below.\n'
               'Stdout:\n{stdout}\nStderr:\n{stderr}')
        if isinstance(msg, bytes):
            msg = msg.decode('UTF-8')
        log.error(msg.format(stdout=stdout.decode('UTF-8'),
                             stderr=stderr.decode('UTF-8')))


def add_command_option(command, name, doc, is_bool=False):
    """
    Add a custom option to a setup command.

    Issues a warning if the option already exists on that command.

    Parameters
    ----------
    command : str
        The name of the command as given on the command line

    name : str
        The name of the build option

    doc : str
        A short description of the option, for the `--help` message

    is_bool : bool, optional
        When `True`, the option is a boolean option and doesn't
        require an associated value.
    """

    dist = get_dummy_distribution()
    cmdcls = dist.get_command_class(command)

    attr = name.replace('-', '_')

    if hasattr(cmdcls, attr):
        raise RuntimeError(
            '{0!r} already has a {1!r} class attribute, barring {2!r} from '
            'being usable as a custom option name.'.format(cmdcls, attr, name))

    for idx, cmd in enumerate(cmdcls.user_options):
        if cmd[0] == name:
            log.warning('Overriding existing {0!r} option '
                        '{1!r}'.format(command, name))
            del cmdcls.user_options[idx]
            if name in cmdcls.boolean_options:
                cmdcls.boolean_options.remove(name)
            break

    cmdcls.user_options.append((name, None, doc))

    if is_bool:
        cmdcls.boolean_options.append(name)

    # Distutils' command parsing requires that a command object have an
    # attribute with the same name as the option (with '-' replaced with '_')
    # in order for that option to be recognized as valid
    setattr(cmdcls, attr, None)


class AstropyRegister(SetuptoolsRegister):
    """Extends the built in 'register' command to support a ``--hidden`` option
    to make the registered version hidden on PyPI by default.

    The result of this is that when a version is registered as "hidden" it can
    still be downloaded from PyPI, but it does not show up in the list of
    actively supported versions under http://pypi.python.org/pypi/astropy, and
    is not set as the most recent version.

    Although this can always be set through the web interface it may be more
    convenient to be able to specify via the 'register' command.  Hidden may
    also be considered a safer default when running the 'register' command,
    though this command uses distutils' normal behavior if the ``--hidden``
    option is omitted.
    """

    user_options = SetuptoolsRegister.user_options + [
        ('hidden', None, 'mark this release as hidden on PyPI by default')
    ]
    boolean_options = SetuptoolsRegister.boolean_options + ['hidden']

    def initialize_options(self):
        SetuptoolsRegister.initialize_options(self)
        self.hidden = False

    def build_post_data(self, action):
        data = SetuptoolsRegister.build_post_data(self, action)
        if action == 'submit' and self.hidden:
            data['_pypi_hidden'] = '1'
        return data

    def _set_config(self):
        # The original register command is buggy--if you use .pypirc with a
        # server-login section *at all* the repository you specify with the -r
        # option will be overwritten with either the repository in .pypirc or
        # with the default,
        # If you do not have a .pypirc using the -r option will just crash.
        # Way to go distutils

        # If we don't set self.repository back to a default value _set_config
        # can crash if there was a user-supplied value for this option; don't
        # worry, we'll get the real value back afterwards
        self.repository = 'pypi'
        SetuptoolsRegister._set_config(self)
        options = self.distribution.get_option_dict('register')
        if 'repository' in options:
            source, value = options['repository']
            # Really anything that came from setup.cfg or the command line
            # should override whatever was in .pypirc
            self.repository = value


if HAVE_SPHINX:
    class AstropyBuildSphinx(SphinxBuildDoc):
        """ A version of the ``build_sphinx`` command that uses the
        version of Astropy that is built by the setup ``build`` command,
        rather than whatever is installed on the system - to build docs
        against the installed version, run ``make html`` in the
        ``astropy/docs`` directory.

        This also automatically creates the docs/_static directories -
        this is needed because github won't create the _static dir
        because it has no tracked files.
        """

        description = 'Build Sphinx documentation for Astropy environment'
        user_options = SphinxBuildDoc.user_options[:]
        user_options.append(('warnings-returncode', 'w',
                             'Parses the sphinx output and sets the return '
                             'code to 1 if there are any warnings. Note that '
                             'this will cause the sphinx log to only update '
                             'when it completes, rather than continuously as '
                             'is normally the case.'))
        user_options.append(('clean-docs', 'l',
                             'Completely clean previous builds, including '
                             'automodapi-generated files before building new '
                             'ones'))
        user_options.append(('no-intersphinx', 'n',
                             'Skip intersphinx, even if conf.py says to use '
                             'it'))
        user_options.append(('open-docs-in-browser', 'o',
                             'Open the docs in a browser (using the '
                             'webbrowser module) if the build finishes '
                             'successfully.'))

        boolean_options = SphinxBuildDoc.boolean_options[:]
        boolean_options.append('warnings-returncode')
        boolean_options.append('clean-docs')
        boolean_options.append('no-intersphinx')
        boolean_options.append('open-docs-in-browser')

        _self_iden_rex = re.compile(r"self\.([^\d\W][\w]+)", re.UNICODE)

        def initialize_options(self):
            SphinxBuildDoc.initialize_options(self)
            self.clean_docs = False
            self.no_intersphinx = False
            self.open_docs_in_browser = False
            self.warnings_returncode = False

        def finalize_options(self):
            #Clear out previous sphinx builds, if requested
            if self.clean_docs:
                dirstorm = ['docs/api']
                if self.build_dir is None:
                    dirstorm.append('docs/_build')
                else:
                    dirstorm.append(self.build_dir)

                for d in dirstorm:
                    if os.path.isdir(d):
                        log.info('Cleaning directory ' + d)
                        shutil.rmtree(d)
                    else:
                        log.info('Not cleaning directory ' + d + ' because '
                                 'not present or not a directory')

            SphinxBuildDoc.finalize_options(self)

        def run(self):
            import webbrowser

            if PY3:
                from urllib.request import pathname2url
            else:
                from urllib.request import pathname2url

            # This is used at the very end of `run` to decide if sys.exit should
            # be called. If it's None, it won't be.
            retcode = None

            # If possible, create the _static dir
            if self.build_dir is not None:
                # the _static dir should be in the same place as the _build dir
                # for Astropy
                basedir, subdir = os.path.split(self.build_dir)
                if subdir == '':  # the path has a trailing /...
                    basedir, subdir = os.path.split(basedir)
                staticdir = os.path.join(basedir, '_static')
                if os.path.isfile(staticdir):
                    raise DistutilsOptionError(
                        'Attempted to build_sphinx in a location where' +
                        staticdir + 'is a file.  Must be a directory.')
                self.mkpath(staticdir)

            #Now make sure Astropy is built and determine where it was built
            build_cmd = self.reinitialize_command('build')
            build_cmd.inplace = 0
            self.run_command('build')
            build_cmd = self.get_finalized_command('build')
            build_cmd_path = os.path.abspath(build_cmd.build_lib)

            #Now generate the source for and spawn a new process that runs the
            #command.  This is needed to get the correct imports for the built
            #version

            runlines, runlineno = inspect.getsourcelines(SphinxBuildDoc.run)
            subproccode = textwrap.dedent("""
            from sphinx.setup_command import *

            os.chdir({srcdir!r})
            sys.path.insert(0, {build_cmd_path!r})

            """).format(build_cmd_path=build_cmd_path, srcdir=self.source_dir)
            #runlines[1:] removes 'def run(self)' on the first line
            subproccode += textwrap.dedent(''.join(runlines[1:]))

            # All "self.foo" in the subprocess code needs to be replaced by the
            # values taken from the current self in *this* process
            subproccode = AstropyBuildSphinx._self_iden_rex.split(subproccode)
            for i in range(1, len(subproccode), 2):
                iden = subproccode[i]
                val = getattr(self, iden)
                if iden.endswith('_dir'):
                    #Directories should be absolute, because the `chdir` call
                    #in the new process moves to a different directory
                    subproccode[i] = repr(os.path.abspath(val))
                else:
                    subproccode[i] = repr(val)
            subproccode = ''.join(subproccode)

            if self.no_intersphinx:
                #the confoverrides variable in sphinx.setup_command.BuildDoc can
                #be used to override the conf.py ... but this could well break
                #if future versions of sphinx change the internals of BuildDoc,
                #so remain vigilant!
                subproccode = subproccode.replace('confoverrides = {}',
                    'confoverrides = {\'intersphinx_mapping\':{}}')

            log.debug('Starting subprocess of {0} with python code:\n{1}\n'
                      '[CODE END])'.format(sys.executable, subproccode))

            # To return the number of warnings, we need to capture stdout. This
            # prevents a continuous updating at the terminal, but there's no
            # apparent way around this.
            if self.warnings_returncode:
                proc = subprocess.Popen([sys.executable],
                                        stdin=subprocess.PIPE,
                                        stdout=subprocess.PIPE,
                                        stderr=subprocess.STDOUT)
                stdo, stde = proc.communicate(subproccode)

                print(stdo)

                stdolines = stdo.split('\n')

                if stdolines[-2] == 'build succeeded.':
                    retcode = 0
                else:
                    retcode = 1

                if retcode != 0:
                    if os.environ.get('TRAVIS', None) == 'true':
                        #this means we are in the travis build, so customize
                        #the message appropriately.
                        msg = ('The build_sphinx travis build FAILED '
                               'because sphinx issued documentation '
                               'warnings (scroll up to see the warnings).')
                    else:  # standard failure message
                        msg = ('build_sphinx returning a non-zero exit '
                               'code because sphinx issued documentation '
                               'warnings.')
                    log.warn(msg)

            else:
                proc = subprocess.Popen([sys.executable], stdin=subprocess.PIPE)
                proc.communicate(subproccode.encode('utf-8'))

            if proc.returncode == 0:
                if self.open_docs_in_browser:
                    if self.builder == 'html':
                        absdir = os.path.abspath(self.builder_target_dir)
                        index_path = os.path.join(absdir, 'index.html')
                        fileurl = 'file://' + pathname2url(index_path)
                        webbrowser.open(fileurl)
                    else:
                        log.warn('open-docs-in-browser option was given, but '
                                 'the builder is not html! Ignogring.')
            else:
                log.warn('Sphinx Documentation subprocess failed with return '
                         'code ' + str(proc.returncode))

            if retcode is not None:
                # this is potentially dangerous in that there might be something
                # after the call to `setup` in `setup.py`, and exiting here will
                # prevent that from running.  But there's no other apparent way
                # to signal what the return code should be.
                sys.exit(retcode)


def get_distutils_display_options():
    """ Returns a set of all the distutils display options in their long and
    short forms.  These are the setup.py arguments such as --name or --version
    which print the project's metadata and then exit.

    Returns
    -------
    opts : set
        The long and short form display option arguments, including the - or --
    """

    short_display_opts = set('-' + o[1] for o in Distribution.display_options
                             if o[1])
    long_display_opts = set('--' + o[0] for o in Distribution.display_options)

    # Include -h and --help which are not explicitly listed in
    # Distribution.display_options (as they are handled by optparse)
    short_display_opts.add('-h')
    long_display_opts.add('--help')

    # This isn't the greatest approach to hardcode these commands.
    # However, there doesn't seem to be a good way to determine
    # whether build *will be* run as part of the command at this
    # phase.
    display_commands = set([
        'clean', 'register', 'setopt', 'saveopts', 'egg_info',
        'alias'])

    return short_display_opts.union(long_display_opts.union(display_commands))


def is_distutils_display_option():
    """ Returns True if sys.argv contains any of the distutils display options
    such as --version or --name.
    """

    display_options = get_distutils_display_options()
    return bool(set(sys.argv[1:]).intersection(display_options))


def update_package_files(srcdir, extensions, package_data, packagenames,
                         package_dirs):
    """
    This function is deprecated and maintained for backward compatibility
    with affiliated packages.  Affiliated packages should update their
    setup.py to use `get_package_info` instead.
    """
    warnings.warn(
        "astropy.setup_helpers.update_package_files is deprecated.  Update "
        "your setup.py to use astropy.setup_helpers.get_package_info instead.",
        AstropyDeprecationWarning)

    info = get_package_info(srcdir)
    extensions.extend(info['ext_modules'])
    package_data.update(info['package_data'])
    packagenames = list(set(packagenames + info['packages']))
    package_dirs.update(info['package_dir'])


def get_package_info(srcdir):
    """
    Collates all of the information for building all subpackages
    subpackages and returns a dictionary of keyword arguments that can
    be passed directly to `distutils.setup`.

    The purpose of this function is to allow subpackages to update the
    arguments to the package's ``setup()`` function in its setup.py
    script, rather than having to specify all extensions/package data
    directly in the ``setup.py``.  See Astropy's own
    ``setup.py`` for example usage and the Astropy development docs
    for more details.

    This function obtains that information by iterating through all
    packages in ``srcdir`` and locating a ``setup_package.py`` module.
    This module can contain the following functions:
    ``get_extensions()``, ``get_package_data()``,
    ``get_build_options()``, ``get_external_libraries()``,
    and ``requires_2to3()``.

    Each of those functions take no arguments.

    - ``get_extensions`` returns a list of
      `distutils.extension.Extension` objects.

    - ``get_package_data()`` returns a dict formatted as required by
      the ``package_data`` argument to ``setup()``.

    - ``get_build_options()`` returns a list of tuples describing the
      extra build options to add.

    - ``get_external_libraries()`` returns
      a list of libraries that can optionally be built using external
      dependencies.

    - ``requires_2to3()`` should return `True` when the source code
      requires `2to3` processing to run on Python 3.x.  If
      ``requires_2to3()`` is missing, it is assumed to return `True`.

    """
    ext_modules = []
    packages = []
    package_data = {}
    package_dir = {}
    skip_2to3 = []

    # Add the package's .cfg file
    package_data[''] = [srcdir + ".cfg"]

    # Use the find_packages tool to locate all packages and modules
    packages = filter_packages(find_packages())

    # For each of the setup_package.py modules, extract any
    # information that is needed to install them.  The build options
    # are extracted first, so that their values will be available in
    # subsequent calls to `get_extensions`, etc.
    for setuppkg in iter_setup_packages(srcdir):
        if hasattr(setuppkg, 'get_build_options'):
            options = setuppkg.get_build_options()
            for option in options:
                add_command_option('build', *option)
        if hasattr(setuppkg, 'get_external_libraries'):
            libraries = setuppkg.get_external_libraries()
            for library in libraries:
                add_external_library(library)
        if hasattr(setuppkg, 'requires_2to3'):
            requires_2to3 = setuppkg.requires_2to3()
        else:
            requires_2to3 = True
        if not requires_2to3:
            skip_2to3.append(
                os.path.dirname(setuppkg.__file__))

    for setuppkg in iter_setup_packages(srcdir):
        # get_extensions must include any Cython extensions by their .pyx
        # filename.
        if hasattr(setuppkg, 'get_extensions'):
            ext_modules.extend(setuppkg.get_extensions())
        if hasattr(setuppkg, 'get_package_data'):
            package_data.update(setuppkg.get_package_data())

    # Locate any .pyx files not already specified, and add their extensions in.
    # The default include dirs include numpy to facilitate numerical work.
    ext_modules.extend(get_cython_extensions(srcdir, ext_modules, ['numpy']))

    # Now remove extensions that have the special name 'skip_cython', as they
    # exist Only to indicate that the cython extensions shouldn't be built
    for i, ext in reversed(list(enumerate(ext_modules))):
        if ext.name == 'skip_cython':
            del ext_modules[i]

    # On Microsoft compilers, we need to pass the '/MANIFEST'
    # commandline argument.  This was the default on MSVC 9.0, but is
    # now required on MSVC 10.0, but it doesn't seeem to hurt to add
    # it unconditionally.
    if get_compiler_option() == 'msvc':
        for ext in ext_modules:
            ext.extra_link_args.append('/MANIFEST')

    return {
        'ext_modules': ext_modules,
        'packages': packages,
        'package_dir': package_dir,
        'package_data': package_data,
        'skip_2to3': skip_2to3
        }


def iter_setup_packages(srcdir):
    """ A generator that finds and imports all of the ``setup_package.py``
    modules in the source packages.

    Returns
    -------
    modgen : generator
        A generator that yields (modname, mod), where `mod` is the module and
        `modname` is the module name for the ``setup_package.py`` modules.

    """
    for root, dirs, files in walk_skip_hidden(srcdir):
        if 'setup_package.py' in files:
            filename = os.path.join(root, 'setup_package.py')
            module = import_file(filename)
            yield module


def iter_pyx_files(srcdir):
    """ A generator that yields Cython source files (ending in '.pyx') in the
    source packages.

    Returns
    -------
    pyxgen : generator
        A generator that yields (extmod, fullfn) where `extmod` is the
        full name of the module that the .pyx file would live in based
        on the source directory structure, and `fullfn` is the path to
        the .pyx file.

    """
    for dirpath, dirnames, filenames in walk_skip_hidden(srcdir):
        modbase = dirpath.replace(os.sep, '.')
        for fn in filenames:
            if fn.endswith('.pyx'):
                fullfn = os.path.join(dirpath, fn)
                # Package must match file name
                extmod = modbase + '.' + fn[:-4]
                yield (extmod, fullfn)


def should_build_with_cython(package, release=None):
    """Returns the previously used Cython version (or 'unknown' if not
    previously built) if Cython should be used to build extension modules from
    pyx files.  If the ``release`` parameter is not specified an attempt is
    made to determine the release flag from `astropy.version`.
    """

    try:
        version_module = __import__(package + '.cython_version',
                                    fromlist=['release', 'cython_version'])
    except ImportError:
        version_module = None

    if release is None and version_module is not None:
        try:
            release = version_module.release
        except AttributeError:
            pass

    try:
        cython_version = version_module.cython_version
    except AttributeError:
        cython_version = 'unknown'

    # Only build with Cython if, of course, Cython is installed, we're in a
    # development version (i.e. not release) or the Cython-generated source
    # files haven't been created yet (cython_version == 'unknown'). The latter
    # case can happen even when release is True if checking out a release tag
    # from the repository
    if HAVE_CYTHON and (not release or cython_version == 'unknown'):
        return cython_version
    else:
        return False


def get_cython_extensions(srcdir, prevextensions=tuple(), extincludedirs=None):
    """ Looks for Cython files and generates Extensions if needed.

    Parameters
    ----------
    srcdir : str
        Path to the root of the source directory to search.
    prevextensions : list of `~distutils.core.Extension` objects
        The extensions that are already defined.  Any .pyx files already here
        will be ignored.
    extincludedirs : list of str or None
        Directories to include as the `include_dirs` argument to the generated
        `~distutils.core.Extension` objects.

    Returns
    -------
    exts : list of `~distutils.core.Extension` objects
        The new extensions that are needed to compile all .pyx files (does not
        include any already in `prevextensions`).
    """

    # Vanilla setuptools and old versions of distribute include Cython files
    # as .c files in the sources, not .pyx, so we cannot simply look for
    # existing .pyx sources in the previous sources, but we should also check
    # for .c files with the same remaining filename. So we look for .pyx and
    # .c files, and we strip the extension.

    prevsourcepaths = []
    for ext in prevextensions:
        for s in ext.sources:
            if s.endswith(('.pyx', '.c')):
                prevsourcepaths.append(os.path.realpath(os.path.splitext(s)[0]))

    ext_modules = []
    for extmod, pyxfn in iter_pyx_files(srcdir):
        if os.path.realpath(os.path.splitext(pyxfn)[0]) not in prevsourcepaths:
            ext_modules.append(Extension(extmod, [pyxfn],
                                         include_dirs=extincludedirs))

    return ext_modules


def write_if_different(filename, data):
    """ Write `data` to `filename`, if the content of the file is different.

    Parameters
    ----------
    filename : str
        The file name to be written to.
    data : bytes
        The data to be written to `filename`.
    """
    assert isinstance(data, bytes)

    if os.path.exists(filename):
        with open(filename, 'rb') as fd:
            original_data = fd.read()
    else:
        original_data = None

    if original_data != data:
        with open(filename, 'wb') as fd:
            fd.write(data)


def get_numpy_include_path():
    """
    Gets the path to the numpy headers.
    """
    # We need to go through this nonsense in case setuptools
    # downloaded and installed Numpy for us as part of the build or
    # install, since Numpy may still think it's in "setup mode", when
    # in fact we're ready to use it to build astropy now.

    if PY3:
        import builtins
        if hasattr(builtins, '__NUMPY_SETUP__'):
            del builtins.__NUMPY_SETUP__
        import numpy
        imp.reload(numpy)
    else:
        import builtins
        if hasattr(__builtin__, '__NUMPY_SETUP__'):
            del builtins.__NUMPY_SETUP__
        import numpy
        reload(numpy)

    try:
        numpy_include = numpy.get_include()
    except AttributeError:
        numpy_include = numpy.get_numpy_include()
    return numpy_include


def import_file(filename):
    """
    Imports a module from a single file as if it doesn't belong to a
    particular package.
    """
    # Specifying a traditional dot-separated fully qualified name here
    # results in a number of "Parent module 'astropy' not found while
    # handling absolute import" warnings.  Using the same name, the
    # namespaces of the modules get merged together.  So, this
    # generates an underscore-separated name which is more likely to
    # be unique, and it doesn't really matter because the name isn't
    # used directly here anyway.
    with open(filename, 'U') as fd:
        name = '_'.join(
            os.path.relpath(os.path.splitext(filename)[0]).split(os.sep)[1:])
        return imp.load_module(name, fd, filename, ('.py', 'U', 1))


class DistutilsExtensionArgs(collections.defaultdict):
    """
    A special dictionary whose default values are the empty list.

    This is useful for building up a set of arguments for
    `distutils.Extension` without worrying whether the entry is
    already present.
    """
    def __init__(self, *args, **kwargs):
        def default_factory():
            return []

        super(DistutilsExtensionArgs, self).__init__(
            default_factory, *args, **kwargs)

    def update(self, other):
        for key, val in list(other.items()):
            self[key].extend(val)


def pkg_config(packages, default_libraries):
    """
    Uses pkg-config to update a set of distutils Extension arguments
    to include the flags necessary to link against the given packages.

    If the pkg-config lookup fails, default_libraries is applied to
    libraries.

    Parameters
    ----------
    packages : list of str
        A list of pkg-config packages to look up.

    default_libraries : list of str
        A list of library names to use if the pkg-config lookup fails.

    Returns
    -------
    config : dict
        A dictionary containing keyword arguments to
        `distutils.Extension`.  These entries include:

        - ``include_dirs``: A list of include directories
        - ``library_dirs``: A list of library directories
        - ``libraries``: A list of libraries
        - ``define_macros``: A list of macro defines
        - ``undef_macros``: A list of macros to undefine
        - ``extra_compile_args``: A list of extra arguments to pass to
          the compiler
    """

    flag_map = {'-I': 'include_dirs', '-L': 'library_dirs', '-l': 'libraries',
                '-D': 'define_macros', '-U': 'undef_macros'}
    command = "pkg-config --libs --cflags {0}".format(' '.join(packages)),

    result = DistutilsExtensionArgs()

    try:
        pipe = subprocess.Popen(command, shell=True, stdout=subprocess.PIPE)
        output = pipe.communicate()[0].strip()
    except subprocess.CalledProcessError as e:
        lines = [
            "pkg-config failed.  This may cause the build to fail below.",
            "  command: {0}".format(e.cmd),
            "  returncode: {0}".format(e.returncode),
            "  output: {0}".format(e.output)
            ]
        log.warn('\n'.join(lines))
        result['libraries'].extend(default_libraries)
    else:
        if pipe.returncode != 0:
            lines = [
                "pkg-config could not lookup up package(s) {0}.".format(
                    ", ".join(packages)),
                "This may cause the build to fail below."
                ]
            log.warn('\n'.join(lines))
            result['libraries'].extend(default_libraries)
        else:
            for token in output.split():
                # It's not clear what encoding the output of
                # pkg-config will come to us in.  It will probably be
                # some combination of pure ASCII (for the compiler
                # flags) and the filesystem encoding (for any argument
                # that includes directories or filenames), but this is
                # just conjecture, as the pkg-config documentation
                # doesn't seem to address it.
                arg = token[:2].decode('ascii')
                value = token[2:].decode(sys.getfilesystemencoding())
                if arg in flag_map:
                    if arg == '-D':
                        value = tuple(value.split('=', 1))
                    result[flag_map[arg]].append(value)
                else:
                    result['extra_compile_args'].append(value)

    return result


def add_external_library(library):
    """
    Add a build option for selecting the internal or system copy of a library.

    Parameters
    ----------
    library : str
        The name of the library.  If the library is `foo`, the build
        option will be called `--use-system-foo`.
    """

    for command in ['build', 'build_ext', 'install']:
        add_command_option(command, str('use-system-' + library),
                           'Use the system {0} library'.format(library),
                           is_bool=True)


def use_system_library(library):
    """
    Returns `True` if the build configuration indicates that the given
    library should use the system copy of the library rather than the
    internal one.

    For the given library `foo`, this will be `True` if
    `--use-system-foo` or `--use-system-libraries` was provided at the
    commandline or in `setup.cfg`.

    Parameters
    ----------
    library : str
        The name of the library

    Returns
    -------
    use_system : bool
        `True` if the build should use the system copy of the library.
    """
    return (
        get_distutils_build_or_install_option('use_system_{0}'.format(library))
        or get_distutils_build_or_install_option('use_system_libraries'))


def filter_packages(packagenames):
    """
    Removes some packages from the package list that shouldn't be
    installed on the current version of Python.
    """

    if PY3:
        exclude = '_py2'
    else:
        exclude = '_py3'

    return [x for x in packagenames if not x.endswith(exclude)]


class FakeBuildSphinx(Command):
    """
    A dummy build_sphinx command that is called if Sphinx is not
    installed and displays a relevant error message
    """

    #user options inherited from sphinx.setup_command.BuildDoc
    user_options = [
         ('fresh-env', 'E', '' ),
         ('all-files', 'a', ''),
         ('source-dir=', 's', ''),
         ('build-dir=', None, ''),
         ('config-dir=', 'c', ''),
         ('builder=', 'b', ''),
         ('project=', None, ''),
         ('version=', None, ''),
         ('release=', None, ''),
         ('today=', None, ''),
         ('link-index', 'i', ''),
     ]

    #user options appended in astropy.setup_helpers.AstropyBuildSphinx
    user_options.append(('warnings-returncode', 'w',''))
    user_options.append(('clean-docs', 'l', ''))
    user_options.append(('no-intersphinx', 'n', ''))
    user_options.append(('open-docs-in-browser', 'o',''))



    def initialize_options(self):
        try:
            raise RuntimeError("Sphinx must be installed for build_sphinx")
        except:
            log.error('error : Sphinx must be installed for build_sphinx')
            sys.exit(1)
