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Yank/repex.py
Yank/restraints.py
Yank/sampling.py
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Yank/yamlbuild.py
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Yank/../examples/README.md
Yank/../examples/abl-imatinib-explicit/README.md
Yank/../examples/abl-imatinib-explicit/render_trajectory.py
Yank/../examples/abl-imatinib-explicit/run-torque.sh
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Yank/../examples/abl-imatinib-explicit/visualize.tcsh
Yank/../examples/abl-imatinib-explicit/yank.yaml
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Yank/../examples/s-alpha-ionone-explicit/setup/receptor.prmtop
Yank/../examples/s-alpha-ionone-explicit/setup/s-a-ion.prepin
Yank/../examples/s-alpha-ionone-explicit/setup/s-a-ion.prepin.bu
Yank/../examples/s-alpha-ionone-explicit/setup/solvent.inpcrd
Yank/../examples/s-alpha-ionone-explicit/setup/solvent.pdb
Yank/../examples/s-alpha-ionone-explicit/setup/solvent.prmtop
Yank/../examples/s-alpha-ionone-explicit/setup/testout.pdb
Yank/../examples/tip3p-in-tip3p/README.md
Yank/../examples/tip3p-in-tip3p/run-torque.sh
Yank/../examples/tip3p-in-tip3p/run.sh
Yank/../examples/tip3p-in-tip3p/yank.yaml
Yank/../examples/tip3p-in-tip3p/input/tip3p-molecule.mol2
Yank/../examples/yank-yaml-cookbook/README.md
Yank/../examples/yank-yaml-cookbook/all-options.yaml
Yank/../examples/yank-yaml-cookbook/combinatorial-experiment.yaml
Yank/commands/__init__.py
Yank/commands/analyze.py
Yank/commands/cite.py
Yank/commands/cleanup.py
Yank/commands/help.py
Yank/commands/platforms.py
Yank/commands/prepare.py
Yank/commands/run.py
Yank/commands/script.py
Yank/commands/selftest.py
Yank/commands/status.py
Yank/mixing/__init__.py
Yank/mixing/_mix_replicas_old.py
Yank/tests/__init__.py
Yank/tests/test_cli.py
Yank/tests/test_commands.py
Yank/tests/test_examples.py
Yank/tests/test_mixing.py
Yank/tests/test_prepare.py
Yank/tests/test_repex.py
Yank/tests/test_sampling.py
Yank/tests/test_utils.py
Yank/tests/test_yaml.py
Yank/tests/test_yank.py
yank.egg-info/PKG-INFO
yank.egg-info/SOURCES.txt
yank.egg-info/dependency_links.txt
yank.egg-info/entry_points.txt
yank.egg-info/not-zip-safe
yank.egg-info/requires.txt
yank.egg-info/top_level.txt