smarty/__init__.py
smarty/atomtyper.py
smarty/cli_smarty.py
smarty/cli_smirky.py
smarty/environment.py
smarty/forcefield.py
smarty/forcefield_utils.py
smarty/gbsaforces.py
smarty/sampler.py
smarty/sampler_smirky.py
smarty/score_utils.py
smarty/utils.py
smarty.egg-info/PKG-INFO
smarty.egg-info/SOURCES.txt
smarty.egg-info/dependency_links.txt
smarty.egg-info/entry_points.txt
smarty.egg-info/top_level.txt
smarty/data/README.md
smarty/data/__init__.py
smarty/data/atomtypes/README.md
smarty/data/atomtypes/basetypes.smarts
smarty/data/atomtypes/decorators-simple.smarts
smarty/data/atomtypes/decorators.smarts
smarty/data/atomtypes/initial_AlkEthOH.smarts
smarty/data/atomtypes/initialtypes.smarts
smarty/data/atomtypes/new-decorators.smarts
smarty/data/atomtypes/replacements.smarts
smarty/data/forcefield/Frosst_AlkEtOH.ffxml
smarty/data/forcefield/Frosst_AlkEtOH_GBSA.ffxml
smarty/data/forcefield/Frosst_AlkEtOH_MDL.ffxml
smarty/data/forcefield/Frosst_AlkEtOH_parmAtFrosst.ffxml
smarty/data/forcefield/README.md
smarty/data/forcefield/benzene_minimal.ffxml
smarty/data/forcefield/frcmod.Frosst_AlkEthOH_withIDs
smarty/data/forcefield/smirff99Frosst.ffxml
smarty/data/molecules/AlkEtOH-tripos.mol2.gz
smarty/data/molecules/AlkEthOH_c100.crd
smarty/data/molecules/AlkEthOH_c100.mol2
smarty/data/molecules/AlkEthOH_c100.top
smarty/data/molecules/AlkEthOH_c1161.crd
smarty/data/molecules/AlkEthOH_c1161.mol2
smarty/data/molecules/AlkEthOH_c1161.top
smarty/data/molecules/AlkEthOH_c1266.crd
smarty/data/molecules/AlkEthOH_c1266.mol2
smarty/data/molecules/AlkEthOH_c1266.top
smarty/data/molecules/AlkEthOH_c38.crd
smarty/data/molecules/AlkEthOH_c38.mol2
smarty/data/molecules/AlkEthOH_c38.top
smarty/data/molecules/AlkEthOH_r0.crd
smarty/data/molecules/AlkEthOH_r0.mol2
smarty/data/molecules/AlkEthOH_r0.top
smarty/data/molecules/AlkEthOH_r118.crd
smarty/data/molecules/AlkEthOH_r118.mol2
smarty/data/molecules/AlkEthOH_r118.top
smarty/data/molecules/AlkEthOH_r12.crd
smarty/data/molecules/AlkEthOH_r12.mol2
smarty/data/molecules/AlkEthOH_r12.top
smarty/data/molecules/AlkEthOH_test_filt1_ff.mol2
smarty/data/molecules/AlkEthOH_test_filt1_tripos.mol2
smarty/data/molecules/DrugBank_atyped.oeb
smarty/data/molecules/MiniDrugBank_ff.mol2
smarty/data/molecules/MiniDrugBank_tripos.mol2
smarty/data/molecules/PhEthOH_pFrosstTyped.oeb
smarty/data/molecules/PhEthOH_pFrosstTyped_first200.oeb
smarty/data/molecules/README.md
smarty/data/molecules/benzene.crd
smarty/data/molecules/benzene.mol2
smarty/data/molecules/benzene.top
smarty/data/molecules/test_filt1_tripos.mol2
smarty/data/molecules/zinc-subset-parm@frosst.mol2.gz
smarty/data/molecules/zinc-subset-tripos.mol2.gz
smarty/data/odds_files/atom_OR_bases.smarts
smarty/data/odds_files/atom_decorators.smarts
smarty/data/odds_files/atom_index_odds.smarts
smarty/data/odds_files/bond_AND_decorators.smarts
smarty/data/odds_files/bond_OR_bases.smarts
smarty/data/odds_files/bond_index_odds.smarts
smarty/data/odds_files/substitutions.smarts
smarty/data/systems/README.md
smarty/data/systems/amber/cyclohexane_ethanol_0.4_0.6.inpcrd
smarty/data/systems/amber/cyclohexane_ethanol_0.4_0.6.prmtop
smarty/data/systems/monomers/butanol.frcmod
smarty/data/systems/monomers/butanol.inpcrd
smarty/data/systems/monomers/butanol.mol2
smarty/data/systems/monomers/butanol.prmtop
smarty/data/systems/monomers/butanol.sdf
smarty/data/systems/monomers/cyclohexane.frcmod
smarty/data/systems/monomers/cyclohexane.inpcrd
smarty/data/systems/monomers/cyclohexane.mol2
smarty/data/systems/monomers/cyclohexane.prmtop
smarty/data/systems/monomers/cyclohexane.sdf
smarty/data/systems/monomers/ethanol.frcmod
smarty/data/systems/monomers/ethanol.inpcrd
smarty/data/systems/monomers/ethanol.mol2
smarty/data/systems/monomers/ethanol.prmtop
smarty/data/systems/monomers/ethanol.sdf
smarty/data/systems/monomers/methane.frcmod
smarty/data/systems/monomers/methane.inpcrd
smarty/data/systems/monomers/methane.mol2
smarty/data/systems/monomers/methane.prmtop
smarty/data/systems/monomers/methane.sdf
smarty/data/systems/monomers/propane.frcmod
smarty/data/systems/monomers/propane.inpcrd
smarty/data/systems/monomers/propane.mol2
smarty/data/systems/monomers/propane.prmtop
smarty/data/systems/monomers/propane.sdf
smarty/data/systems/monomers/water.mol2
smarty/data/systems/monomers/water.sdf
smarty/data/systems/packmol_boxes/cyclohexane_ethanol_0.4_0.6.pdb
smarty/data/systems/packmol_boxes/cyclohexane_water.pdb
smarty/data/systems/packmol_boxes/ethanol_water.pdb
smarty/data/systems/packmol_boxes/propane_methane_butanol_0.2_0.3_0.5.pdb
smarty/tests/__init__.py
smarty/tests/test_atomtyper.py
smarty/tests/test_environments.py
smarty/tests/test_forcefield.py
smarty/tests/test_sampler.py
smarty/tests/test_smirky_sampler.py
smarty/tests/test_utils.py