All Classes Namespaces Functions Variables Pages

### - r -

- readParameterFile() : CharmmParameterSet
- readStreamFile() : CharmmParameterSet
- readTopologyFile() : CharmmParameterSet
- registerAtomType() : ForceField
- registerGenerator() : ForceField
- registerPlatform() : Platform
- registerResidueTemplate() : ForceField
- registerScript() : ForceField
- reinitialize() : Context
- removeConstraint() : System
- removeForce() : System
- report() : CheckpointReporter , DCDReporter , PDBReporter , StateDataReporter
- residues() : Chain , Topology
- runForClockTime() : Simulation