Topology Member List

This is the complete list of members for Topology, including all inherited members.

__init__(self) | Topology |
__repr__(self) | Topology |
addAtom | Topology |
addBond(self, atom1, atom2) | Topology |
addChain | Topology |
addResidue | Topology |
atoms(self) | Topology |
bonds(self) | Topology |
chains(self) | Topology |
createDisulfideBonds(self, positions) | Topology |
createStandardBonds(self) | Topology |
getPeriodicBoxVectors(self) | Topology |
getUnitCellDimensions(self) | Topology |
loadBondDefinitions(file) | Topology | static
residues(self) | Topology |
setPeriodicBoxVectors(self, vectors) | Topology |
setUnitCellDimensions(self, dimensions) | Topology |