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All Classes Namespaces Functions Variables Typedefs Enumerations Enumerator Friends Pages
Here is a list of all class members with links to the classes they belong to:

### - a -

- addAcceptor() : CustomHbondForce
- addAngle() : AmoebaAngleForce , AmoebaInPlaneAngleForce , CustomAngleForce , HarmonicAngleForce
- addBond() : AmoebaBondForce , CustomBondForce , CustomCompoundBondForce , GBVIForce , HarmonicBondForce
- addComputedValue() : CustomGBForce
- addComputeGlobal() : CustomIntegrator
- addComputePerDof() : CustomIntegrator
- addComputeSum() : CustomIntegrator
- addConstrainPositions() : CustomIntegrator
- addConstraint() : System
- addConstrainVelocities() : CustomIntegrator
- addDonor() : CustomHbondForce
- addEnergyTerm() : CustomGBForce
- addException() : NonbondedForce
- addExclusion() : CustomGBForce , CustomHbondForce , CustomManyParticleForce , CustomNonbondedForce
- addForce() : System
- addFunction() : CustomCompoundBondForce , CustomGBForce , CustomHbondForce , CustomNonbondedForce
- addGlobalParameter() : CustomAngleForce , CustomBondForce , CustomCompoundBondForce , CustomExternalForce , CustomGBForce , CustomHbondForce , CustomManyParticleForce , CustomNonbondedForce , CustomTorsionForce
- addGlobalVariable() : CustomIntegrator
- addInteractionGroup() : CustomNonbondedForce
- addMap() : CMAPTorsionForce
- addMultipole() : AmoebaMultipoleForce
- addOutOfPlaneBend() : AmoebaOutOfPlaneBendForce
- addParticle() : AmoebaGeneralizedKirkwoodForce , AmoebaVdwForce , AmoebaWcaDispersionForce , CustomExternalForce , CustomGBForce , CustomManyParticleForce , CustomNonbondedForce , DrudeForce , GBSAOBCForce , GBVIForce , NonbondedForce , System
- addPerAcceptorParameter() : CustomHbondForce
- addPerAngleParameter() : CustomAngleForce
- addPerBondParameter() : CustomBondForce , CustomCompoundBondForce
- addPerDofVariable() : CustomIntegrator
- addPerDonorParameter() : CustomHbondForce
- addPerParticleParameter() : CustomExternalForce , CustomGBForce , CustomManyParticleForce , CustomNonbondedForce
- addPerTorsionParameter() : CustomTorsionForce
- addPiTorsion() : AmoebaPiTorsionForce
- addScreenedPair() : DrudeForce
- addStretchBend() : AmoebaStretchBendForce
- addTabulatedFunction() : CustomCompoundBondForce , CustomGBForce , CustomHbondForce , CustomManyParticleForce , CustomNonbondedForce
- addTorsion() : CMAPTorsionForce , CustomTorsionForce , PeriodicTorsionForce , RBTorsionForce
- addTorsionTorsion() : AmoebaTorsionTorsionForce
- addUpdateContextState() : CustomIntegrator
- AmoebaAngleForce() : AmoebaAngleForce
- AmoebaBondForce() : AmoebaBondForce
- AmoebaGeneralizedKirkwoodForce() : AmoebaGeneralizedKirkwoodForce
- AmoebaInPlaneAngleForce() : AmoebaInPlaneAngleForce
- AmoebaMultipoleForce() : AmoebaMultipoleForce
- AmoebaOutOfPlaneBendForce() : AmoebaOutOfPlaneBendForce
- AmoebaPiTorsionForce() : AmoebaPiTorsionForce
- AmoebaStretchBendForce() : AmoebaStretchBendForce
- AmoebaTorsionTorsionForce() : AmoebaTorsionTorsionForce
- AmoebaVdwForce() : AmoebaVdwForce
- AmoebaWcaDispersionForce() : AmoebaWcaDispersionForce
- AndersenThermostat() : AndersenThermostat
- applyConstraints() : Context
- applyVelocityConstraints() : Context