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GB_FORCE_GROUP simtk::openmm::app::charmmpsffile::CharmmPsfFile
GBn simtk::openmm::app::amberprmtopfile
GBn2 simtk::openmm::app::amberprmtopfile
GBSAOBCForce simtk::openmm::openmm
GBVIForce simtk::openmm::openmm
getAcceptorParameters simtk::openmm::openmm::CustomHbondForce
getAEwald simtk::openmm::openmm::AmoebaMultipoleForce
getAmoebaGlobalAngleCubic simtk::openmm::openmm::AmoebaAngleForce
getAmoebaGlobalAnglePentic simtk::openmm::openmm::AmoebaAngleForce
getAmoebaGlobalAngleQuartic simtk::openmm::openmm::AmoebaAngleForce
getAmoebaGlobalAngleSextic simtk::openmm::openmm::AmoebaAngleForce
getAmoebaGlobalBondCubic simtk::openmm::openmm::AmoebaBondForce
getAmoebaGlobalBondQuartic simtk::openmm::openmm::AmoebaBondForce
getAmoebaGlobalInPlaneAngleCubic simtk::openmm::openmm::AmoebaInPlaneAngleForce
getAmoebaGlobalInPlaneAnglePentic simtk::openmm::openmm::AmoebaInPlaneAngleForce
getAmoebaGlobalInPlaneAngleQuartic simtk::openmm::openmm::AmoebaInPlaneAngleForce
getAmoebaGlobalInPlaneAngleSextic simtk::openmm::openmm::AmoebaInPlaneAngleForce
getAmoebaGlobalOutOfPlaneBendCubic simtk::openmm::openmm::AmoebaOutOfPlaneBendForce
getAmoebaGlobalOutOfPlaneBendPentic simtk::openmm::openmm::AmoebaOutOfPlaneBendForce
getAmoebaGlobalOutOfPlaneBendQuartic simtk::openmm::openmm::AmoebaOutOfPlaneBendForce
getAmoebaGlobalOutOfPlaneBendSextic simtk::openmm::openmm::AmoebaOutOfPlaneBendForce
getAngleParameters
simtk::openmm::openmm::CustomAngleForce.getAngleParameters() simtk::openmm::openmm::AmoebaInPlaneAngleForce.getAngleParameters() simtk::openmm::openmm::HarmonicAngleForce.getAngleParameters() simtk::openmm::openmm::AmoebaAngleForce.getAngleParameters()
getApplyThermostat simtk::openmm::openmm::RPMDIntegrator
getAwater simtk::openmm::openmm::AmoebaWcaDispersionForce
getBondParameters
simtk::openmm::openmm::AmoebaBondForce.getBondParameters() simtk::openmm::openmm::HarmonicBondForce.getBondParameters() simtk::openmm::openmm::CustomBondForce.getBondParameters() simtk::openmm::openmm::GBVIForce.getBondParameters() simtk::openmm::openmm::CustomCompoundBondForce.getBondParameters()
getBornRadiusScalingMethod simtk::openmm::openmm::GBVIForce
getBoxVectors simtk::openmm::app::amberinpcrdfile::AmberInpcrdFile
getByAtomicNumber simtk::openmm::app::element::Element
getByMass simtk::openmm::app::element::Element
getBySymbol simtk::openmm::app::element::Element
getComputationStep simtk::openmm::openmm::CustomIntegrator
getComputedValueParameters simtk::openmm::openmm::CustomGBForce
getConstraintParameters simtk::openmm::openmm::System
getConstraintTolerance simtk::openmm::openmm::Integrator
getContractions simtk::openmm::openmm::RPMDIntegrator
getCovalentMap simtk::openmm::openmm::AmoebaMultipoleForce
getCovalentMaps simtk::openmm::openmm::AmoebaMultipoleForce
getCutoff simtk::openmm::openmm::AmoebaVdwForce
getCutoffDistance
simtk::openmm::openmm::CustomNonbondedForce.getCutoffDistance() simtk::openmm::openmm::CustomHbondForce.getCutoffDistance() simtk::openmm::openmm::NonbondedForce.getCutoffDistance() simtk::openmm::openmm::CustomGBForce.getCutoffDistance() simtk::openmm::openmm::GBVIForce.getCutoffDistance() simtk::openmm::openmm::AmoebaMultipoleForce.getCutoffDistance() simtk::openmm::openmm::GBSAOBCForce.getCutoffDistance() simtk::openmm::openmm::CustomManyParticleForce.getCutoffDistance()
getDefaultCollisionFrequency simtk::openmm::openmm::AndersenThermostat
getDefaultPeriodicBoxVectors simtk::openmm::openmm::System
getDefaultPluginsDirectory simtk::openmm::openmm::Platform
getDefaultPressure
simtk::openmm::openmm::MonteCarloAnisotropicBarostat.getDefaultPressure() simtk::openmm::openmm::MonteCarloBarostat.getDefaultPressure() simtk::openmm::openmm::MonteCarloMembraneBarostat.getDefaultPressure()
getDefaultSurfaceTension simtk::openmm::openmm::MonteCarloMembraneBarostat
getDefaultTemperature simtk::openmm::openmm::AndersenThermostat
getDispoff simtk::openmm::openmm::AmoebaWcaDispersionForce
getDonorParameters simtk::openmm::openmm::CustomHbondForce
getDrudeFriction simtk::openmm::openmm::DrudeLangevinIntegrator
getDrudeTemperature simtk::openmm::openmm::DrudeLangevinIntegrator
getElectrostaticPotential simtk::openmm::openmm::AmoebaMultipoleForce
getEnergyFunction
simtk::openmm::openmm::CustomAngleForce.getEnergyFunction() simtk::openmm::openmm::CustomExternalForce.getEnergyFunction() simtk::openmm::openmm::CustomTorsionForce.getEnergyFunction() simtk::openmm::openmm::CustomNonbondedForce.getEnergyFunction() simtk::openmm::openmm::CustomHbondForce.getEnergyFunction() simtk::openmm::openmm::CustomBondForce.getEnergyFunction() simtk::openmm::openmm::CustomCompoundBondForce.getEnergyFunction() simtk::openmm::openmm::CustomManyParticleForce.getEnergyFunction()
getEnergyTermParameters simtk::openmm::openmm::CustomGBForce
getEpsh simtk::openmm::openmm::AmoebaWcaDispersionForce
getEpsilonCombiningRule simtk::openmm::openmm::AmoebaVdwForce
getEpso simtk::openmm::openmm::AmoebaWcaDispersionForce
getErrorTolerance
simtk::openmm::openmm::VariableVerletIntegrator.getErrorTolerance() simtk::openmm::openmm::VariableLangevinIntegrator.getErrorTolerance()
getEwaldErrorTolerance
simtk::openmm::openmm::NonbondedForce.getEwaldErrorTolerance() simtk::openmm::openmm::AmoebaMultipoleForce.getEwaldErrorTolerance()
getExceptionParameters simtk::openmm::openmm::NonbondedForce
getExclusionParticles
simtk::openmm::openmm::CustomNonbondedForce.getExclusionParticles() simtk::openmm::openmm::CustomHbondForce.getExclusionParticles() simtk::openmm::openmm::CustomGBForce.getExclusionParticles() simtk::openmm::openmm::CustomManyParticleForce.getExclusionParticles()
getForce simtk::openmm::openmm::System
getForceGroup simtk::openmm::openmm::Force
getForces
simtk::openmm::openmm::State.getForces() simtk::openmm::openmm::System.getForces()
getFrequency
simtk::openmm::openmm::MonteCarloAnisotropicBarostat.getFrequency() simtk::openmm::openmm::MonteCarloBarostat.getFrequency() simtk::openmm::openmm::MonteCarloMembraneBarostat.getFrequency() simtk::openmm::openmm::CMMotionRemover.getFrequency()
getFriction
simtk::openmm::openmm::DrudeLangevinIntegrator.getFriction() simtk::openmm::openmm::RPMDIntegrator.getFriction() simtk::openmm::openmm::VariableLangevinIntegrator.getFriction() simtk::openmm::openmm::BrownianIntegrator.getFriction() simtk::openmm::openmm::LangevinIntegrator.getFriction()
getFunctionParameters
simtk::openmm::openmm::Discrete3DFunction.getFunctionParameters() simtk::openmm::openmm::Continuous3DFunction.getFunctionParameters() simtk::openmm::openmm::CustomNonbondedForce.getFunctionParameters() simtk::openmm::openmm::CustomHbondForce.getFunctionParameters() simtk::openmm::openmm::Continuous1DFunction.getFunctionParameters() simtk::openmm::openmm::CustomGBForce.getFunctionParameters() simtk::openmm::openmm::Continuous2DFunction.getFunctionParameters() simtk::openmm::openmm::Discrete2DFunction.getFunctionParameters() simtk::openmm::openmm::CustomCompoundBondForce.getFunctionParameters() simtk::openmm::openmm::Discrete1DFunction.getFunctionParameters()
getGenerators simtk::openmm::app::forcefield::ForceField
getGlobalParameterDefaultValue
simtk::openmm::openmm::CustomAngleForce.getGlobalParameterDefaultValue() simtk::openmm::openmm::CustomExternalForce.getGlobalParameterDefaultValue() simtk::openmm::openmm::CustomTorsionForce.getGlobalParameterDefaultValue() simtk::openmm::openmm::CustomNonbondedForce.getGlobalParameterDefaultValue() simtk::openmm::openmm::CustomHbondForce.getGlobalParameterDefaultValue() simtk::openmm::openmm::CustomBondForce.getGlobalParameterDefaultValue() simtk::openmm::openmm::CustomGBForce.getGlobalParameterDefaultValue() simtk::openmm::openmm::CustomCompoundBondForce.getGlobalParameterDefaultValue() simtk::openmm::openmm::CustomManyParticleForce.getGlobalParameterDefaultValue()
getGlobalParameterName
simtk::openmm::openmm::CustomAngleForce.getGlobalParameterName() simtk::openmm::openmm::CustomExternalForce.getGlobalParameterName() simtk::openmm::openmm::CustomTorsionForce.getGlobalParameterName() simtk::openmm::openmm::CustomNonbondedForce.getGlobalParameterName() simtk::openmm::openmm::CustomHbondForce.getGlobalParameterName() simtk::openmm::openmm::CustomBondForce.getGlobalParameterName() simtk::openmm::openmm::CustomGBForce.getGlobalParameterName() simtk::openmm::openmm::CustomCompoundBondForce.getGlobalParameterName() simtk::openmm::openmm::CustomManyParticleForce.getGlobalParameterName()
getGlobalVariable simtk::openmm::openmm::CustomIntegrator
getGlobalVariableByName simtk::openmm::openmm::CustomIntegrator
getGlobalVariableName simtk::openmm::openmm::CustomIntegrator
getIncludeCavityTerm simtk::openmm::openmm::AmoebaGeneralizedKirkwoodForce
getInducedDipoles simtk::openmm::openmm::AmoebaMultipoleForce
getIntegrator simtk::openmm::openmm::Context
getInteractionGroupParameters simtk::openmm::openmm::CustomNonbondedForce
getKineticEnergy simtk::openmm::openmm::State
getKineticEnergyExpression simtk::openmm::openmm::CustomIntegrator
getLocalPosition simtk::openmm::openmm::LocalCoordinatesSite
getMapParameters simtk::openmm::openmm::CMAPTorsionForce
getMinimizationErrorTolerance simtk::openmm::openmm::DrudeSCFIntegrator
getMolecules simtk::openmm::openmm::Context
getMultipoleParameters simtk::openmm::openmm::AmoebaMultipoleForce
getMutualInducedMaxIterations simtk::openmm::openmm::AmoebaMultipoleForce
getMutualInducedTargetEpsilon simtk::openmm::openmm::AmoebaMultipoleForce
getName simtk::openmm::openmm::Platform
getNonbondedMethod
simtk::openmm::openmm::CustomNonbondedForce.getNonbondedMethod() simtk::openmm::openmm::CustomHbondForce.getNonbondedMethod() simtk::openmm::openmm::NonbondedForce.getNonbondedMethod() simtk::openmm::openmm::CustomGBForce.getNonbondedMethod() simtk::openmm::openmm::GBVIForce.getNonbondedMethod() simtk::openmm::openmm::AmoebaMultipoleForce.getNonbondedMethod() simtk::openmm::openmm::AmoebaVdwForce.getNonbondedMethod() simtk::openmm::openmm::GBSAOBCForce.getNonbondedMethod() simtk::openmm::openmm::CustomManyParticleForce.getNonbondedMethod()
getNumAcceptors simtk::openmm::openmm::CustomHbondForce
getNumAngles
simtk::openmm::openmm::CustomAngleForce.getNumAngles() simtk::openmm::openmm::AmoebaInPlaneAngleForce.getNumAngles() simtk::openmm::openmm::HarmonicAngleForce.getNumAngles() simtk::openmm::openmm::AmoebaAngleForce.getNumAngles()
getNumBonds
simtk::openmm::openmm::AmoebaBondForce.getNumBonds() simtk::openmm::openmm::HarmonicBondForce.getNumBonds() simtk::openmm::openmm::CustomBondForce.getNumBonds() simtk::openmm::openmm::GBVIForce.getNumBonds() simtk::openmm::openmm::CustomCompoundBondForce.getNumBonds()
getNumComputations simtk::openmm::openmm::CustomIntegrator
getNumComputedValues simtk::openmm::openmm::CustomGBForce
getNumConstraints simtk::openmm::openmm::System
getNumCopies simtk::openmm::openmm::RPMDIntegrator
getNumDonors simtk::openmm::openmm::CustomHbondForce
getNumEnergyTerms simtk::openmm::openmm::CustomGBForce
getNumExceptions simtk::openmm::openmm::NonbondedForce
getNumExclusions
simtk::openmm::openmm::CustomNonbondedForce.getNumExclusions() simtk::openmm::openmm::CustomHbondForce.getNumExclusions() simtk::openmm::openmm::CustomGBForce.getNumExclusions() simtk::openmm::openmm::CustomManyParticleForce.getNumExclusions()
getNumForces simtk::openmm::openmm::System
getNumFrames
simtk::openmm::app::gromacsgrofile::GromacsGroFile.getNumFrames() simtk::openmm::app::pdbfile::PDBFile.getNumFrames() simtk::openmm::app::pdbxfile::PDBxFile.getNumFrames()
getNumFunctions
simtk::openmm::openmm::CustomNonbondedForce.getNumFunctions() simtk::openmm::openmm::CustomHbondForce.getNumFunctions() simtk::openmm::openmm::CustomGBForce.getNumFunctions() simtk::openmm::openmm::CustomCompoundBondForce.getNumFunctions()
getNumGlobalParameters
simtk::openmm::openmm::CustomAngleForce.getNumGlobalParameters() simtk::openmm::openmm::CustomExternalForce.getNumGlobalParameters() simtk::openmm::openmm::CustomTorsionForce.getNumGlobalParameters() simtk::openmm::openmm::CustomNonbondedForce.getNumGlobalParameters() simtk::openmm::openmm::CustomHbondForce.getNumGlobalParameters() simtk::openmm::openmm::CustomBondForce.getNumGlobalParameters() simtk::openmm::openmm::CustomGBForce.getNumGlobalParameters() simtk::openmm::openmm::CustomCompoundBondForce.getNumGlobalParameters() simtk::openmm::openmm::CustomManyParticleForce.getNumGlobalParameters()
getNumGlobalVariables simtk::openmm::openmm::CustomIntegrator
getNumInteractionGroups simtk::openmm::openmm::CustomNonbondedForce
getNumMaps simtk::openmm::openmm::CMAPTorsionForce
getNumMultipoles simtk::openmm::openmm::AmoebaMultipoleForce
getNumOutOfPlaneBends simtk::openmm::openmm::AmoebaOutOfPlaneBendForce
getNumParticles
simtk::openmm::openmm::CustomExternalForce.getNumParticles() simtk::openmm::openmm::AmoebaGeneralizedKirkwoodForce.getNumParticles() simtk::openmm::openmm::VirtualSite.getNumParticles() simtk::openmm::openmm::CustomNonbondedForce.getNumParticles() simtk::openmm::openmm::NonbondedForce.getNumParticles() simtk::openmm::openmm::System.getNumParticles() simtk::openmm::openmm::CustomGBForce.getNumParticles() simtk::openmm::openmm::GBVIForce.getNumParticles() simtk::openmm::openmm::DrudeForce.getNumParticles() simtk::openmm::openmm::AmoebaWcaDispersionForce.getNumParticles() simtk::openmm::openmm::AmoebaVdwForce.getNumParticles() simtk::openmm::openmm::GBSAOBCForce.getNumParticles() simtk::openmm::openmm::CustomManyParticleForce.getNumParticles()
getNumParticlesPerBond simtk::openmm::openmm::CustomCompoundBondForce
getNumParticlesPerSet simtk::openmm::openmm::CustomManyParticleForce
getNumPerAcceptorParameters simtk::openmm::openmm::CustomHbondForce
getNumPerAngleParameters simtk::openmm::openmm::CustomAngleForce
getNumPerBondParameters
simtk::openmm::openmm::CustomBondForce.getNumPerBondParameters() simtk::openmm::openmm::CustomCompoundBondForce.getNumPerBondParameters()
getNumPerDofVariables simtk::openmm::openmm::CustomIntegrator
getNumPerDonorParameters simtk::openmm::openmm::CustomHbondForce
getNumPerParticleParameters
simtk::openmm::openmm::CustomExternalForce.getNumPerParticleParameters() simtk::openmm::openmm::CustomNonbondedForce.getNumPerParticleParameters() simtk::openmm::openmm::CustomGBForce.getNumPerParticleParameters() simtk::openmm::openmm::CustomManyParticleForce.getNumPerParticleParameters()
getNumPerTorsionParameters simtk::openmm::openmm::CustomTorsionForce
getNumPiTorsions simtk::openmm::openmm::AmoebaPiTorsionForce
getNumPlatforms simtk::openmm::openmm::Platform
getNumScreenedPairs simtk::openmm::openmm::DrudeForce
getNumStretchBends simtk::openmm::openmm::AmoebaStretchBendForce
getNumTabulatedFunctions
simtk::openmm::openmm::CustomNonbondedForce.getNumTabulatedFunctions() simtk::openmm::openmm::CustomHbondForce.getNumTabulatedFunctions() simtk::openmm::openmm::CustomGBForce.getNumTabulatedFunctions() simtk::openmm::openmm::CustomCompoundBondForce.getNumTabulatedFunctions() simtk::openmm::openmm::CustomManyParticleForce.getNumTabulatedFunctions()
getNumTorsions
simtk::openmm::openmm::CustomTorsionForce.getNumTorsions() simtk::openmm::openmm::RBTorsionForce.getNumTorsions() simtk::openmm::openmm::PeriodicTorsionForce.getNumTorsions() simtk::openmm::openmm::CMAPTorsionForce.getNumTorsions()
getNumTorsionTorsionGrids simtk::openmm::openmm::AmoebaTorsionTorsionForce
getNumTorsionTorsions simtk::openmm::openmm::AmoebaTorsionTorsionForce
getOpenMMVersion simtk::openmm::openmm::Platform
getOriginWeights simtk::openmm::openmm::LocalCoordinatesSite
getOutOfPlaneBendParameters simtk::openmm::openmm::AmoebaOutOfPlaneBendForce
getParameter simtk::openmm::openmm::Context
getParameters simtk::openmm::openmm::State
getParticle simtk::openmm::openmm::VirtualSite
getParticleExclusions simtk::openmm::openmm::AmoebaVdwForce
getParticleMass simtk::openmm::openmm::System
getParticleParameters
simtk::openmm::openmm::CustomExternalForce.getParticleParameters() simtk::openmm::openmm::AmoebaGeneralizedKirkwoodForce.getParticleParameters() simtk::openmm::openmm::CustomNonbondedForce.getParticleParameters() simtk::openmm::openmm::NonbondedForce.getParticleParameters() simtk::openmm::openmm::CustomGBForce.getParticleParameters() simtk::openmm::openmm::GBVIForce.getParticleParameters() simtk::openmm::openmm::DrudeForce.getParticleParameters() simtk::openmm::openmm::AmoebaWcaDispersionForce.getParticleParameters() simtk::openmm::openmm::AmoebaVdwForce.getParticleParameters() simtk::openmm::openmm::GBSAOBCForce.getParticleParameters() simtk::openmm::openmm::CustomManyParticleForce.getParticleParameters()
getPerAcceptorParameterName simtk::openmm::openmm::CustomHbondForce
getPerAngleParameterName simtk::openmm::openmm::CustomAngleForce
getPerBondParameterName
simtk::openmm::openmm::CustomBondForce.getPerBondParameterName() simtk::openmm::openmm::CustomCompoundBondForce.getPerBondParameterName()
getPerDofVariable simtk::openmm::openmm::CustomIntegrator
getPerDofVariableByName simtk::openmm::openmm::CustomIntegrator
getPerDofVariableName simtk::openmm::openmm::CustomIntegrator
getPerDonorParameterName simtk::openmm::openmm::CustomHbondForce
getPeriodicBoxVectors simtk::openmm::openmm::State
getPeriodicBoxVolume simtk::openmm::openmm::State
getPermutationMode simtk::openmm::openmm::CustomManyParticleForce
getPerParticleParameterName
simtk::openmm::openmm::CustomExternalForce.getPerParticleParameterName() simtk::openmm::openmm::CustomNonbondedForce.getPerParticleParameterName() simtk::openmm::openmm::CustomGBForce.getPerParticleParameterName() simtk::openmm::openmm::CustomManyParticleForce.getPerParticleParameterName()
getPerTorsionParameterName simtk::openmm::openmm::CustomTorsionForce
getPiTorsionParameters simtk::openmm::openmm::AmoebaPiTorsionForce
getPlatform
simtk::openmm::openmm::Platform.getPlatform() simtk::openmm::openmm::Context.getPlatform()
getPlatformByName simtk::openmm::openmm::Platform
getPmeBSplineOrder simtk::openmm::openmm::AmoebaMultipoleForce
getPmeGridDimensions simtk::openmm::openmm::AmoebaMultipoleForce
getPMEParameters simtk::openmm::openmm::NonbondedForce
getPolarizationType simtk::openmm::openmm::AmoebaMultipoleForce
getPositions
simtk::openmm::openmm::State.getPositions() simtk::openmm::app::amberinpcrdfile::AmberInpcrdFile.getPositions() simtk::openmm::app::desmonddmsfile::DesmondDMSFile.getPositions() simtk::openmm::app::gromacsgrofile::GromacsGroFile.getPositions() simtk::openmm::app::modeller::Modeller.getPositions() simtk::openmm::app::pdbfile::PDBFile.getPositions() simtk::openmm::app::pdbxfile::PDBxFile.getPositions()
getPotentialEnergy simtk::openmm::openmm::State
getProbeRadius simtk::openmm::openmm::AmoebaGeneralizedKirkwoodForce
getPropertyDefaultValue simtk::openmm::openmm::Platform
getPropertyNames simtk::openmm::openmm::Platform
getPropertyValue simtk::openmm::openmm::Platform
getProvenance simtk::openmm::app::desmonddmsfile::DesmondDMSFile
getQuinticLowerLimitFactor simtk::openmm::openmm::GBVIForce
getQuinticUpperBornRadiusLimit simtk::openmm::openmm::GBVIForce
getRandomNumberSeed
simtk::openmm::openmm::AndersenThermostat.getRandomNumberSeed() simtk::openmm::openmm::MonteCarloAnisotropicBarostat.getRandomNumberSeed() simtk::openmm::openmm::DrudeLangevinIntegrator.getRandomNumberSeed() simtk::openmm::openmm::RPMDIntegrator.getRandomNumberSeed() simtk::openmm::openmm::MonteCarloBarostat.getRandomNumberSeed() simtk::openmm::openmm::VariableLangevinIntegrator.getRandomNumberSeed() simtk::openmm::openmm::MonteCarloMembraneBarostat.getRandomNumberSeed() simtk::openmm::openmm::BrownianIntegrator.getRandomNumberSeed() simtk::openmm::openmm::LangevinIntegrator.getRandomNumberSeed() simtk::openmm::openmm::CustomIntegrator.getRandomNumberSeed()
getReactionFieldDielectric simtk::openmm::openmm::NonbondedForce
getReciprocalSpaceForceGroup simtk::openmm::openmm::NonbondedForce
getRminh simtk::openmm::openmm::AmoebaWcaDispersionForce
getRmino simtk::openmm::openmm::AmoebaWcaDispersionForce
getScaleX simtk::openmm::openmm::MonteCarloAnisotropicBarostat
getScaleY simtk::openmm::openmm::MonteCarloAnisotropicBarostat
getScaleZ simtk::openmm::openmm::MonteCarloAnisotropicBarostat
getScreenedPairParameters simtk::openmm::openmm::DrudeForce
getShctd simtk::openmm::openmm::AmoebaWcaDispersionForce
getSigmaCombiningRule simtk::openmm::openmm::AmoebaVdwForce
getSlevy simtk::openmm::openmm::AmoebaWcaDispersionForce
getSoluteDielectric
simtk::openmm::openmm::AmoebaGeneralizedKirkwoodForce.getSoluteDielectric() simtk::openmm::openmm::GBVIForce.getSoluteDielectric() simtk::openmm::openmm::GBSAOBCForce.getSoluteDielectric()
getSolventDielectric
simtk::openmm::openmm::AmoebaGeneralizedKirkwoodForce.getSolventDielectric() simtk::openmm::openmm::GBVIForce.getSolventDielectric() simtk::openmm::openmm::GBSAOBCForce.getSolventDielectric()
getSpeed simtk::openmm::openmm::Platform
getState
simtk::openmm::openmm::RPMDIntegrator.getState() simtk::openmm::openmm::Context.getState()
getStepSize simtk::openmm::openmm::Integrator
getStretchBendParameters simtk::openmm::openmm::AmoebaStretchBendForce
getSurfaceAreaEnergy simtk::openmm::openmm::GBSAOBCForce
getSurfaceAreaFactor simtk::openmm::openmm::AmoebaGeneralizedKirkwoodForce
getSwitchingDistance
simtk::openmm::openmm::CustomNonbondedForce.getSwitchingDistance() simtk::openmm::openmm::NonbondedForce.getSwitchingDistance()
getSystem simtk::openmm::openmm::Context
getSystemMultipoleMoments simtk::openmm::openmm::AmoebaMultipoleForce
getTabulatedFunction
simtk::openmm::openmm::CustomNonbondedForce.getTabulatedFunction() simtk::openmm::openmm::CustomHbondForce.getTabulatedFunction() simtk::openmm::openmm::CustomGBForce.getTabulatedFunction() simtk::openmm::openmm::CustomCompoundBondForce.getTabulatedFunction() simtk::openmm::openmm::CustomManyParticleForce.getTabulatedFunction()
getTabulatedFunctionName
simtk::openmm::openmm::CustomNonbondedForce.getTabulatedFunctionName() simtk::openmm::openmm::CustomHbondForce.getTabulatedFunctionName() simtk::openmm::openmm::CustomGBForce.getTabulatedFunctionName() simtk::openmm::openmm::CustomCompoundBondForce.getTabulatedFunctionName() simtk::openmm::openmm::CustomManyParticleForce.getTabulatedFunctionName()
getTemperature
simtk::openmm::openmm::MonteCarloAnisotropicBarostat.getTemperature() simtk::openmm::openmm::DrudeLangevinIntegrator.getTemperature() simtk::openmm::openmm::RPMDIntegrator.getTemperature() simtk::openmm::openmm::MonteCarloBarostat.getTemperature() simtk::openmm::openmm::VariableLangevinIntegrator.getTemperature() simtk::openmm::openmm::MonteCarloMembraneBarostat.getTemperature() simtk::openmm::openmm::BrownianIntegrator.getTemperature() simtk::openmm::openmm::LangevinIntegrator.getTemperature()
getTime simtk::openmm::openmm::State
getTopology
simtk::openmm::app::desmonddmsfile::DesmondDMSFile.getTopology() simtk::openmm::app::modeller::Modeller.getTopology() simtk::openmm::app::pdbfile::PDBFile.getTopology() simtk::openmm::app::pdbxfile::PDBxFile.getTopology()
getTorsionParameters
simtk::openmm::openmm::CustomTorsionForce.getTorsionParameters() simtk::openmm::openmm::RBTorsionForce.getTorsionParameters() simtk::openmm::openmm::PeriodicTorsionForce.getTorsionParameters() simtk::openmm::openmm::CMAPTorsionForce.getTorsionParameters()
getTorsionTorsionGrid simtk::openmm::openmm::AmoebaTorsionTorsionForce
getTorsionTorsionParameters simtk::openmm::openmm::AmoebaTorsionTorsionForce
getTotalEnergy simtk::openmm::openmm::RPMDIntegrator
getTypeFilter simtk::openmm::openmm::CustomManyParticleForce
getUnitCellDimensions
simtk::openmm::app::gromacsgrofile::GromacsGroFile.getUnitCellDimensions() simtk::openmm::app::topology::Topology.getUnitCellDimensions()
getUseDispersionCorrection
simtk::openmm::openmm::NonbondedForce.getUseDispersionCorrection() simtk::openmm::openmm::AmoebaVdwForce.getUseDispersionCorrection()
getUseLongRangeCorrection simtk::openmm::openmm::CustomNonbondedForce
getUseSwitchingFunction
simtk::openmm::openmm::CustomNonbondedForce.getUseSwitchingFunction() simtk::openmm::openmm::NonbondedForce.getUseSwitchingFunction()
getVelocities
simtk::openmm::openmm::State.getVelocities() simtk::openmm::app::amberinpcrdfile::AmberInpcrdFile.getVelocities()
getVirtualSite simtk::openmm::openmm::System
getWeight
simtk::openmm::openmm::ThreeParticleAverageSite.getWeight() simtk::openmm::openmm::TwoParticleAverageSite.getWeight()
getWeight12 simtk::openmm::openmm::OutOfPlaneSite
getWeight13 simtk::openmm::openmm::OutOfPlaneSite
getWeightCross simtk::openmm::openmm::OutOfPlaneSite
getXWeights simtk::openmm::openmm::LocalCoordinatesSite
getXYMode simtk::openmm::openmm::MonteCarloMembraneBarostat
getYWeights simtk::openmm::openmm::LocalCoordinatesSite
getZMode simtk::openmm::openmm::MonteCarloMembraneBarostat
GromacsGroFile simtk::openmm::app::gromacsgrofile
GromacsTopFile simtk::openmm::app::gromacstopfile
group_list simtk::openmm::app::charmmpsffile::CharmmPsfFile
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