# This file is part of MSMBuilder.
#
# Copyright 2011 Stanford University
#
# MSMBuilder is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA

# list of all the modules (files) that are part of msmbuilder scripts
__all__ = [
 'Assign',
 'AssignHierarchical',
 'BACE_Coarse_Graining',
 'BuildMSM',
 'CalculateClusterRadii',
 'CalculateImpliedTimescales',
 'CalculateMFPTs',
 'CalculateProjectDistance',
 'CalculateProjectSASA',
 'CalculateTPT',
 'Cluster',
 'ConvertDataToHDF',
 'CreateAtomIndices',
 'FindPaths',
 'InteractiveSCRE',
 'PCCA',
 'PlotImpliedTimescales',
 'RebuildProject',
 'SampleTrajectory',
 'SaveStructures',
 'TrimAssignments',
 'tICA_train']
