

set -ex



featureCounts -v
subread-align || [[ $? == 1 ]]
exactSNP
subread-buildindex || [[ $? == 255 ]]
subjunc || [[ $? == 1 ]]
subindel || [[ $? = 255 ]]
repair -h
qualityScores
subread-fullscan || [[ $? == 255 ]]
exit 0
