# This file created by conda-build 24.5.1
# meta.yaml template originally from:
# /Users/distiller/project/recipes/flye, last modified Fri Jul 26 16:24:27 2024
# ------------------------------------------------

package:
  name: flye
  version: 2.9.4
source:
  patches:
    - 0001-Makefile-aarch64.patch
  sha256: 197a2dfe39fc324a39d8e1901af4f539609159c4a64a578ec8e60f73f5ea4696
  url: https://github.com/fenderglass/Flye/archive/2.9.4.tar.gz
build:
  entry_points:
    - flye = flye.main:main
  number: '2'
  run_exports:
    - flye >=2.9.4,<3.0a0
  string: py39h8eb8761_2
requirements:
  build:
    - ca-certificates 2024.7.4 hf0a4a13_0
    - cctools_osx-arm64 986 h62378fb_0
    - clang 16.0.6 default_h675cc0c_11
    - clang-16 16.0.6 default_h5c12605_11
    - clang_impl_osx-arm64 16.0.6 hc421ffc_18
    - clang_osx-arm64 16.0.6 h54d7cd3_18
    - clangxx 16.0.6 default_h675cc0c_11
    - clangxx_impl_osx-arm64 16.0.6 hcd7bac0_18
    - clangxx_osx-arm64 16.0.6 h54d7cd3_18
    - compiler-rt 16.0.6 h3808999_2
    - compiler-rt_osx-arm64 16.0.6 h3808999_2
    - icu 75.1 hfee45f7_0
    - ld64_osx-arm64 711 ha4bd21c_0
    - libclang-cpp16 16.0.6 default_h5c12605_11
    - libcxx 18.1.8 h167917d_0
    - libiconv 1.17 h0d3ecfb_2
    - libllvm16 16.0.6 haab561b_3
    - libxml2 2.12.7 h01dff8b_4
    - libzlib 1.3.1 hfb2fe0b_1
    - llvm-tools 16.0.6 haab561b_3
    - make 4.3 he57ea6c_1
    - openssl 3.3.1 hfb2fe0b_2
    - sigtool 0.1.3 h44b9a77_0
    - tapi 1100.0.11 he4954df_0
    - xz 5.2.6 h57fd34a_0
    - zstd 1.5.6 hb46c0d2_0
  host:
    - bzip2 1.0.8 h99b78c6_7
    - ca-certificates 2024.7.4 hf0a4a13_0
    - libcxx 18.1.8 h167917d_0
    - libffi 3.4.2 h3422bc3_5
    - libsqlite 3.46.0 hfb93653_0
    - libzlib 1.2.13 hfb2fe0b_6
    - ncurses 6.5 hb89a1cb_0
    - openssl 3.3.1 hfb2fe0b_2
    - pip 24.0 pyhd8ed1ab_0
    - python 3.9.19 hd7ebdb9_0_cpython
    - readline 8.2 h92ec313_1
    - setuptools 71.0.4 pyhd8ed1ab_0
    - tk 8.6.13 h5083fa2_1
    - tzdata 2024a h0c530f3_0
    - wheel 0.43.0 pyhd8ed1ab_1
    - xz 5.2.6 h57fd34a_0
    - zlib 1.2.13 hfb2fe0b_6
  run:
    - libcxx >=16
    - libzlib >=1.2.13,<2.0a0
    - python >=3.9,<3.10.0a0
    - python_abi 3.9.* *_cp39
test:
  commands:
    - flye -h | grep "Assembly"
    - python -c "import flye.tests.test_toy as t; t.main()"
about:
  dev_url: https://github.com/fenderglass/Flye
  doc_url: https://github.com/fenderglass/Flye/blob/flye/docs/USAGE.md
  home: https://github.com/fenderglass/Flye
  license: BSD-3-Clause
  license_family: BSD
  license_file: LICENSE
  summary: A fast and accurate de novo assembler for single molecule sequencing reads
    using repeat graphs.
extra:
  additional-platforms:
    - linux-aarch64
    - osx-arm64
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:Flye
    - doi:10.1038/s41587-019-0072-8
    - doi:10.1038/s41592-020-00971-x
    - doi:10.1073/pnas.1604560113
    - usegalaxy-eu:flye
