The readqc standalone pipeline;
The filter standalone pipeline;

ex data:
12248.8.247376.CAGAGTG-ACACTCT.fastq.gz

ex run syntax:
% time filter.py -o OUTDIR -f FASTQ.gz --prod-type RNA --skip-blast
% readqc.py -o OUTDIR -f FASTQ.gz --skip-blast -html




