RNAlib-2.2.9

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PKplex.h
1 #ifndef PKPLEX_H
2 #define PKPLEX_H
3
4 #include <ViennaRNA/data_structures.h>
5
6 extern dupVar *PlexHits;
7 extern int PlexHitsArrayLength;
8 extern int NumberOfHits;
9 extern int verbose;
10
11
15 dupVar **PKLduplexfold_XS( const char *s1,
16 int **access_s1,
17 const int threshold,
18 const int alignment_length,
19 const int delta);
20
21 int arraySize(duplexT **array);
22
23 void freeDuplexT(duplexT **array);
24
25 #endif
dupVar
Data structure used in RNApkplex.
Definition: data_structures.h:326
data_structures.h
duplexT
Data structure for RNAduplex.
Definition: data_structures.h:260