RNAlib-2.2.9

- Main Page
- Related Pages
- Modules
- Data Structures
- Files

- Data Structures
- Data Structure Index
- Data Fields

Data Structures
Here are the data structures with brief descriptions:

C_struct_en | Data structure for energy_of_move()
C constrain | Constraints for cofolding
C COORDINATE | This is a workarround for the SWIG Perl Wrapper RNA plot function that returns an array of type COORDINATE
C duplexT | Data structure for RNAduplex
C dupVar | Data structure used in RNApkplex
C interact | Interaction data structure for RNAup
C node | Data structure for RNAsnoop (fold energy list)
C Postorder_list | Postorder data structure
C pu_contrib | Contributions to p_u
C pu_out | Collection of all free_energy of beeing unpaired values for output
C snoopT | Data structure for RNAsnoop
C swString | Some other data structure
C Tree | Tree data structure
C TwoDfold_vars | Variables compound for 2Dfold MFE folding
C TwoDpfold_vars | Variables compound for 2Dfold partition function folding
C vrna_basepair_s | Base pair data structure used in subopt.c
C vrna_bp_stack_s | Base pair stack element
C vrna_cpair_s | This datastructure is used as input parameter in functions of PS_dot.c
C vrna_dimer_conc_s | Data structure for concentration dependency computations
C vrna_dimer_pf_s | Data structure returned by vrna_pf_dimer()
C vrna_exp_param_s | The datastructure that contains temperature scaled Boltzmann weights of the energy parameters
C vrna_fc_s | The most basic data structure required by many functions throughout the RNAlib
C vrna_hc_s | The hard constraints data structure
C vrna_hc_up_s | A single hard constraint for a single nucleotide
C vrna_hx_s | Data structure representing an entry of a helix list
C vrna_md_s | The data structure that contains the complete model details used throughout the calculations
C vrna_mx_mfe_s | Minimum Free Energy (MFE) Dynamic Programming (DP) matrices data structure required within the vrna_fold_compound_t
C vrna_mx_pf_s | Partition function (PF) Dynamic Programming (DP) matrices data structure required within the vrna_fold_compound_t
C vrna_param_s | The datastructure that contains temperature scaled energy parameters
C vrna_path_s | An element of a refolding path list
C vrna_pinfo_s | A base pair info structure
C vrna_plist_s | This datastructure is used as input parameter in functions of PS_dot.h and others
C vrna_sc_s | The soft constraints data structure
C vrna_sect_s | Stack of partial structures for backtracking
C vrna_sol_TwoD_pf_t | Solution element returned from vrna_pf_TwoD()
C vrna_sol_TwoD_t | Solution element returned from vrna_mfe_TwoD()
C vrna_subopt_sol_s | Solution element from subopt.c