RNAlib-2.2.9

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inverse.h
Go to the documentation of this file.
1 #ifndef VIENNA_RNA_PACKAGE_INVERSE_H
2 #define VIENNA_RNA_PACKAGE_INVERSE_H
3
21 extern char *symbolset;
23 extern float final_cost;
25 extern int give_up;
27 extern int inv_verbose;
28
45 float inverse_fold( char *start,
46 const char *target);
47
61 float inverse_pf_fold(char *start,
62 const char *target);
63
67 #endif
final_cost
float final_cost
give_up
int give_up
inv_verbose
int inv_verbose
inverse_pf_fold
float inverse_pf_fold(char *start, const char *target)
Find sequence that maximizes probability of a predefined structure.
symbolset
char * symbolset
This global variable points to the allowed bases, initially "AUGC". It can be used to design sequence...
inverse_fold
float inverse_fold(char *start, const char *target)
Find sequences with predefined structure.