var group__pf__fold =
[
    [ "Compute the structure with maximum expected accuracy (MEA)", "group__mea__fold.html", null ],
    [ "Compute the centroid structure", "group__centroid__fold.html", "group__centroid__fold" ],
    [ "Partition Function for two hybridized Sequences", "group__pf__cofold.html", "group__pf__cofold" ],
    [ "Partition Function for two hybridized Sequences as a stepwise Process", "group__up__cofold.html", "group__up__cofold" ],
    [ "Partition Function and Base Pair Probabilities for Sequence Alignment(s)", "group__consensus__pf__fold.html", "group__consensus__pf__fold" ],
    [ "Partition functions for locally stable secondary structures", "group__local__pf__fold.html", "group__local__pf__fold" ],
    [ "Calculate Partition Functions of a Distance Based Partitioning", "group__kl__neighborhood__pf.html", "group__kl__neighborhood__pf" ],
    [ "boltzmann_sampling.h", "boltzmann__sampling_8h.html", null ],
    [ "part_func.h", "part__func_8h.html", null ],
    [ "vrna_pf", "group__pf__fold.html#ga29e256d688ad221b78d37f427e0e99bc", null ],
    [ "vrna_pf_fold", "group__pf__fold.html#ga59935ba485ac90f0efb5a38e2962d879", null ],
    [ "vrna_pf_circfold", "group__pf__fold.html#ga6dc133fce577fc0370986f3a3301cd10", null ],
    [ "vrna_mean_bp_distance_pr", "group__pf__fold.html#gad3f0c240512e6d43e2e4d4c2076021f5", null ],
    [ "vrna_mean_bp_distance", "group__pf__fold.html#gaa6b8983b559b9ef4b2e1b31113ea317b", null ],
    [ "vrna_stack_prob", "group__pf__fold.html#ga26e3cc2eb127a35625572e9275c24ee4", null ],
    [ "pf_fold_par", "group__pf__fold.html#gac4f95bee734b2563a3d6e9932117ebdf", null ],
    [ "pf_fold", "group__pf__fold.html#gadc3db3d98742427e7001a7fd36ef28c2", null ],
    [ "pf_circ_fold", "group__pf__fold.html#ga819ce5fca8984004ac81c4a3b04cb735", null ],
    [ "free_pf_arrays", "group__pf__fold.html#gae73db3f49a94f0f72e067ecd12681dbd", null ],
    [ "update_pf_params", "group__pf__fold.html#ga384e927890f9c034ff09fa66da102d28", null ],
    [ "update_pf_params_par", "group__pf__fold.html#gaafe2d1b21f5418b123b088aa395e827d", null ],
    [ "export_bppm", "group__pf__fold.html#gac5ac7ee281aae1c5cc5898a841178073", null ],
    [ "get_pf_arrays", "group__pf__fold.html#ga42faebdfce6f070c5f89adfc8427525c", null ],
    [ "mean_bp_distance", "group__pf__fold.html#ga79cbc375af65f11609feb6b055269e7d", null ],
    [ "mean_bp_distance_pr", "group__pf__fold.html#gad5ba36cef8d01cf4244cc09b9bf1ce1d", null ],
    [ "vrna_plist_from_probs", "group__pf__fold.html#gaa3bf26a0ee2e9f2225afbaee44a37264", null ],
    [ "assign_plist_from_pr", "group__pf__fold.html#gacfdacc119b749bccf939de445afea07b", null ]
];