# This file created by conda-build 24.7.1
# meta.yaml template originally from:
# /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/usalign, last modified Thu Dec 12 03:23:05 2024
# ------------------------------------------------

package:
  name: usalign
  version: 2024.07.30
source:
  sha256: 21b510507e9258c1a2e03c6d32680282981a54e27778a3f3f739861ca7c7b38a
  url: https://github.com/eunos-1128/usalign/archive/refs/tags/v2024.07.30.tar.gz
build:
  number: '1'
  run_exports:
    - usalign >=2024.7.30
  string: h5eaf441_1
requirements:
  build:
    - ca-certificates 2024.8.30 h8857fd0_0
    - cctools_osx-64 1010.6 h00edd4c_2
    - clang 18.1.8 default_h179603d_5
    - clang-18 18.1.8 default_h0c94c6a_5
    - clang_impl_osx-64 18.1.8 h6a44ed1_23
    - clang_osx-64 18.1.8 h7e5c614_23
    - clangxx 18.1.8 default_h179603d_5
    - clangxx_impl_osx-64 18.1.8 h4b7810f_23
    - clangxx_osx-64 18.1.8 h7e5c614_23
    - compiler-rt 18.1.8 h1020d70_1
    - compiler-rt_osx-64 18.1.8 hf2b8a54_1
    - ld64_osx-64 951.9 hc8d1a19_2
    - libclang-cpp18.1 18.1.8 default_h0c94c6a_5
    - libcxx 19.1.5 hf95d169_0
    - libcxx-devel 18.1.8 h7c275be_7
    - libiconv 1.17 hd75f5a5_2
    - libllvm18 18.1.8 h9ce406d_2
    - liblzma 5.6.3 hd471939_1
    - libxml2 2.13.5 he8ee3e7_1
    - libzlib 1.3.1 hd23fc13_2
    - llvm-tools 18.1.8 h9ce406d_2
    - llvm-tools-18 18.1.8 h9ce406d_2
    - make 4.4.1 h00291cd_2
    - ncurses 6.5 hf036a51_1
    - openssl 3.4.0 hd471939_0
    - sigtool 0.1.3 h88f4db0_0
    - tapi 1300.6.5 h390ca13_0
    - zstd 1.5.6 h915ae27_0
  host:
    - libcxx 19.1.5 hf95d169_0
  run:
    - libcxx >=18
test:
  commands:
    - USalign -h
about:
  description: "US-align (Universal Structural alignment) is a unified protocol\n\
    to compare 3D structures of different macromolecules (proteins, RNAs and DNAs)\n\
    in different forms (monomers, oligomers and heterocomplexes)\nfor both pairwise\
    \ and multiple structure alignments.\nThe core alogrithm of US-align is extended\
    \ from TM-align and generates optimal structural alignments\nby maximizing TM-score\
    \ of compared strucures through heuristic dynamic programming iterations.\nLarge-scale\
    \ benchmark tests showed that US-align can generate more accurate structural alignments\n\
    with significantly reduced CPU time, compared to the state-of-the-art methods\
    \ developed\nfor specific structural alignment tasks.\nTM-score has values in\
    \ (0,1] with 1 indicating an identical structure match,\nwhere a TM-score \u2265\
    0.5 (or 0.45) means the structures share the same global topology for proteins\
    \ (or RNAs).\n"
  dev_url: https://github.com/pylelab/USalign
  doc_url: https://zhanggroup.org/US-align/help
  home: https://zhanggroup.org/US-align
  license: UNKNOWN
  license_family: OTHER
  license_file: LICENSE
  summary: Universal structure alignment of monomeric, complex proteins and nucleic
    acids
extra:
  additional-platforms:
    - linux-aarch64
    - osx-arm64
  copy_test_source_files: true
  final: true
  recipe-maintainers:
    - eunos-1128
