LICENSE
MANIFEST.in
README.md
test/test_assembly_graph.py
test/test_assembly_graph_copy_depth.py
test/test_blast_func.py
test/test_cpp_wrappers.py
test/test_dependencies.py
test/test_help_text.py
test/test_miniasm_assembly.py
test/test_misc.py
test/test_options.py
test/test_semi_global_alignment.py
test/test_spades_func.py
unicycler/__init__.py
unicycler/alignment.py
unicycler/assembly_graph.py
unicycler/assembly_graph_copy_depth.py
unicycler/assembly_graph_segment.py
unicycler/blast_func.py
unicycler/bridge_common.py
unicycler/bridge_long_read.py
unicycler/bridge_long_read_simple.py
unicycler/bridge_loop_unroll.py
unicycler/bridge_miniasm.py
unicycler/bridge_spades_contig.py
unicycler/cpp_wrappers.py
unicycler/log.py
unicycler/miniasm_assembly.py
unicycler/minimap_alignment.py
unicycler/misc.py
unicycler/path_finding.py
unicycler/pilon_func.py
unicycler/read_ref.py
unicycler/settings.py
unicycler/spades_func.py
unicycler/string_graph.py
unicycler/unicycler.py
unicycler/unicycler_align.py
unicycler/unicycler_check.py
unicycler/unicycler_polish.py
unicycler/unicycler_scrub.py
unicycler/vcf_func.py
unicycler/version.py
unicycler.egg-info/PKG-INFO
unicycler.egg-info/SOURCES.txt
unicycler.egg-info/dependency_links.txt
unicycler.egg-info/entry_points.txt
unicycler.egg-info/not-zip-safe
unicycler.egg-info/top_level.txt