# Hierarchy For All Packages

Package Hierarchies:

- gov.nih.nlm.ncbi.ngs,
- ngs

## Class Hierarchy

- java.lang.Object
  - gov.nih.nlm.ncbi.ngs.LibDependencies
  - gov.nih.nlm.ncbi.ngs.NGS
  - ngs.Package
  - java.lang.Throwable (implements java.io.Serializable)
    - java.lang.Exception
      - ngs.ErrorMsg

## Interface Hierarchy

- ngs.Fragment
  - ngs.Alignment
    - ngs.AlignmentIterator
  - ngs.FragmentIterator
    - ngs.Read
      - ngs.ReadIterator
- ngs.PileupEvent
  - ngs.PileupEventIterator
    - ngs.Pileup
      - ngs.PileupIterator
- ngs.ReadCollection
- ngs.ReadGroup
  - ngs.ReadGroupIterator
- ngs.Reference
  - ngs.ReferenceIterator
- ngs.ReferenceSequence
- ngs.Statistics