# This file created by conda-build 3.15.1
# meta.yaml template originally from:
# /Users/distiller/project/recipes/r-shazam, last modified Sat Oct 27 09:55:45 2018
# ------------------------------------------------

package:
    name: r-shazam
    version: 0.1.10
source:
    sha256: 01c5a8b3b8a9125aa6406bb957c9b6bb3d082c668012942ef988148da0140de6
    url:
        - https://cran.r-project.org/src/contrib/Archive/shazam/shazam_0.1.10.tar.gz
        - https://cran.r-project.org/src/contrib/shazam_0.1.10.tar.gz
build:
    number: '0'
    rpaths:
        - lib/
        - lib/R/lib/
    string: r351h6115d3f_0
requirements:
    host:
        - ca-certificates 2018.10.15 ha4d7672_0
        - cairo 1.14.12 h276e583_5
        - curl 7.61.0 h93b3f91_2
        - fontconfig 2.13.1 hce039c3_0
        - freetype 2.9.1 h6debe1e_4
        - gettext 0.19.8.1 h1f1d5ed_1
        - glib 2.56.2 h464dc38_0
        - gmp 6.1.2 hfc679d8_0
        - graphite2 1.3.12 h7d4d677_1
        - gsl 2.2.1 h002c638_3
        - harfbuzz 1.9.0 h04dbb29_1
        - icu 58.2 hfc679d8_0
        - jpeg 9c h470a237_1
        - krb5 1.14.6 0
        - libcxx 7.0.0 h2d50403_1
        - libffi 3.2.1 hfc679d8_5
        - libgfortran 3.0.0 1
        - libiconv 1.15 h470a237_3
        - libpng 1.6.35 ha92aebf_2
        - libssh2 1.8.0 h5b517e9_2
        - libtiff 4.0.9 he6b73bb_2
        - libxml2 2.9.8 h422b904_5
        - llvm-meta 7.0.0 0
        - ncurses 6.1 hfc679d8_1
        - openssl 1.0.2p h470a237_1
        - pango 1.40.14 he752989_2
        - pcre 8.41 hfc679d8_3
        - pixman 0.34.0 h470a237_3
        - r-ade4 1.7_13 r351hc070d10_0
        - r-alakazam 0.2.11 r351h466af19_0
        - r-ape 5.1 r351h9d2a408_2
        - r-assertthat 0.2.0 r351h6115d3f_1
        - r-base 3.5.1 h4fe35fd_1
        - r-bh 1.66.0_1 r351_1
        - r-bindr 0.1.1 r351h6115d3f_1
        - r-bindrcpp 0.2.2 r351h9d2a408_1
        - r-cli 1.0.0 r351h6115d3f_1
        - r-codetools 0.2_15 r351h6115d3f_1
        - r-colorspace 1.3_2 r351hc070d10_2
        - r-crayon 1.3.4 r351h6115d3f_1
        - r-digest 0.6.18 r351hc070d10_0
        - r-diptest 0.75_7 r351hc070d10_1
        - r-doparallel 1.0.11 r351h6115d3f_1
        - r-dplyr 0.7.6 r351h9d2a408_1
        - r-fansi 0.3.0 r351hc070d10_0
        - r-foreach 1.4.4 r351h6115d3f_1
        - r-ggplot2 3.1.0 r351h6115d3f_0
        - r-glue 1.3.0 r351h470a237_2
        - r-gtable 0.2.0 r351h6115d3f_1
        - r-hms 0.4.2 r351h6115d3f_0
        - r-igraph 1.2.2 r351he0ffe0d_1
        - r-iterators 1.0.10 r351h6115d3f_1
        - r-kedd 1.0.3 r351_2
        - r-kernsmooth 2.23_15 r351h364d78e_2
        - r-labeling 0.3 r351h6115d3f_1
        - r-lattice 0.20_35 r351hc070d10_0
        - r-lazyeval 0.2.1 r351hc070d10_2
        - r-magrittr 1.5 r351h6115d3f_1
        - r-mass 7.3_50 r351hc070d10_2
        - r-matrix 1.2_14 r351hc070d10_2
        - r-mgcv 1.8_24 r351hc070d10_2
        - r-munsell 0.5.0 r351h6115d3f_1
        - r-nlme 3.1_137 r351h364d78e_0
        - r-pillar 1.3.0 r351h6115d3f_0
        - r-pkgconfig 2.0.2 r351h6115d3f_1
        - r-plogr 0.2.0 r351h6115d3f_1
        - r-plyr 1.8.4 r351h9d2a408_2
        - r-prettyunits 1.0.2 r351h6115d3f_1
        - r-progress 1.2.0 r351h6115d3f_2
        - r-purrr 0.2.5 r351hc070d10_1
        - r-r.methodss3 1.7.1 r351h6115d3f_1
        - r-r.oo 1.22.0 r351h6115d3f_0
        - r-r.utils 2.7.0 r351h6115d3f_0
        - r-r6 2.2.2 r351h6115d3f_1
        - r-rcolorbrewer 1.1_2 r351h6115d3f_1
        - r-rcpp 0.12.17 r351h9d2a408_2
        - r-readr 1.1.1 r351h9d2a408_2
        - r-reshape2 1.4.3 r351h9d2a408_2
        - r-rlang 0.3.0.1 r351h470a237_0
        - r-scales 1.0.0 r351h9d2a408_1
        - r-sdmtools 1.1_221 r351h470a237_3
        - r-segmented 0.5_3.0 r351h6115d3f_0
        - r-seqinr 3.4_5 r351h470a237_2
        - r-stringi 1.2.4 r351h9d2a408_1
        - r-stringr 1.3.1 r351h6115d3f_1
        - r-tibble 1.4.2 r351hc070d10_2
        - r-tidyr 0.8.1 r351h9d2a408_2
        - r-tidyselect 0.2.4 r351h9d2a408_2
        - r-utf8 1.1.4 r351hc070d10_0
        - r-viridislite 0.3.0 r351h6115d3f_1
        - r-withr 2.1.2 r351h6115d3f_0
        - readline 7.0 haf1bffa_1
        - tk 8.6.8 ha92aebf_0
        - xz 5.2.4 h470a237_1
        - zlib 1.2.11 h470a237_3
    run:
        - r-alakazam >=0.2.11
        - r-ape
        - r-base >=3.5.1,<3.5.2.0a0
        - r-diptest
        - r-doparallel
        - r-dplyr >=0.5.0
        - r-foreach
        - r-ggplot2 >=2.0.0
        - r-igraph
        - r-iterators
        - r-kedd
        - r-kernsmooth
        - r-lazyeval
        - r-mass
        - r-progress
        - r-scales
        - r-sdmtools
        - r-seqinr
        - r-stringi >=1.1.3
        - r-tidyr
test:
    commands:
        - $R -e "library('shazam')"
about:
    home: http://shazam.readthedocs.io
    license: CC BY-SA 4.0
    license_family: CC
    summary: 'Provides a computational framework for analyzing mutations in immunoglobulin
        (Ig) sequences. Includes methods for Bayesian estimation of antigen-driven
        selection pressure, mutational load quantification, building of somatic hypermutation
        (SHM) models, and model-dependent distance calculations. Also includes empirically
        derived models of SHM for both mice and humans. Citations:  Gupta and Vander
        Heiden, et al (2015) <doi:10.1093/bioinformatics/btv359>,  Yaari, et al (2012)
        <doi:10.1093/nar/gks457>,  Yaari, et al (2013) <doi:10.3389/fimmu.2013.00358>,  Cui,
        et al (2016) <doi:10.4049/jimmunol.1502263>.'
extra:
    copy_test_source_files: true
    final: true
    recipe-maintainers:
        - ArneKr
        - FrodePedersen
        - MathiasHaudgaard
        - bgruening
        - daler
        - jdblischak
        - johanneskoester
