# Vignettes and other documentation

## Vignettes from package 'alakazam'

alakazam::AminoAcids-Vignette |  | Amino acid property analysis | PDF | source | R code
alakazam::Diversity-Vignette |  | Diversity analysis | PDF | source | R code
alakazam::Fastq-Vignette |  | Fastq | PDF | source | R code
alakazam::Files-Vignette |  | File input and output | PDF | source | R code
alakazam::GeneUsage-Vignette |  | Gene usage analysis | PDF | source | R code
alakazam::Lineage-Vignette |  | Lineage reconstruction | PDF | source | R code
alakazam::Topology-Vignette |  | Topology analysis | PDF | source | R code