# This file created by conda-build 3.21.4
# meta.yaml template originally from:
# /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/plastid, last modified Sun Mar 28 20:41:59 2021
# ------------------------------------------------

package:
  name: plastid
  version: 0.5.1
source:
  sha256: d4e32b7ccdeaa3d2ff907469731b54690034f145c5854211f202f02efc6cf5a8
  url: https://files.pythonhosted.org/packages/source/p/plastid/plastid-0.5.1.tar.gz
build:
  number: '3'
  string: py38hbc260c0_3
requirements:
  build:
    - cctools_osx-64 949.0.1 h6407bdd_20
    - clang 11.1.0 h694c41f_0
    - clang-11 11.1.0 default_he082bbe_0
    - clang_osx-64 11.1.0 hb91bd55_0
    - clangxx 11.1.0 default_he082bbe_0
    - compiler-rt 11.1.0 h654b07c_0
    - compiler-rt_osx-64 11.1.0 h8c5fa43_0
    - ld64_osx-64 530 he8994da_20
    - ldid 2.1.2 h7660a38_2
    - libclang-cpp11.1 11.1.0 default_he082bbe_0
    - libcxx 11.1.0 habf9029_0
    - libllvm11 11.1.0 hd011deb_0
    - llvm-tools 11.1.0 hd011deb_0
    - tapi 1100.0.11 h9ce4665_0
    - zlib 1.2.11 h7795811_1010
  host:
    - biopython 1.77 py38h4d0b108_1
    - bzip2 1.0.8 hc929b4f_4
    - c-ares 1.17.1 h0d85af4_1
    - ca-certificates 2020.12.5 h033912b_0
    - certifi 2020.12.5 py38h50d1736_1
    - cycler 0.10.0 py_2
    - cython 0.29.22 py38h91a8764_0
    - freetype 2.10.4 h4cff582_1
    - jpeg 9d hbcb3906_0
    - kiwisolver 1.3.1 py38hd9c93a9_1
    - krb5 1.17.2 h60d9502_0
    - lcms2 2.12 h577c468_0
    - libblas 3.9.0 8_openblas
    - libcblas 3.9.0 8_openblas
    - libcurl 7.75.0 h8ef9fac_0
    - libcxx 11.1.0 habf9029_0
    - libdeflate 1.7 h35c211d_5
    - libedit 3.1.20191231 h0678c8f_2
    - libev 4.33 haf1e3a3_1
    - libffi 3.3 h046ec9c_2
    - libgfortran 5.0.0 9_3_0_h6c81a4c_21
    - libgfortran5 9.3.0 h6c81a4c_21
    - liblapack 3.9.0 8_openblas
    - libnghttp2 1.43.0 h07e645a_0
    - libopenblas 0.3.12 openmp_h54245bb_1
    - libpng 1.6.37 h7cec526_2
    - libssh2 1.9.0 h52ee1ee_6
    - libtiff 4.2.0 h355d032_0
    - libwebp-base 1.2.0 h0d85af4_2
    - llvm-openmp 11.1.0 hda6cdc1_0
    - lz4-c 1.9.3 h046ec9c_0
    - matplotlib-base 3.3.4 py38hb24f337_0
    - ncurses 6.2 h2e338ed_4
    - numpy 1.20.2 py38had91d27_0
    - olefile 0.46 pyh9f0ad1d_1
    - openssl 1.1.1k h0d85af4_0
    - pandas 1.2.3 py38h1588c1c_0
    - pillow 8.1.2 py38h83525de_0
    - pyparsing 2.4.7 pyh9f0ad1d_0
    - pysam 0.16.0.1 py38h4ebacbe_3
    - python 3.8.8 h4e93d89_0_cpython
    - python-dateutil 2.8.1 py_0
    - python_abi 3.8 1_cp38
    - pytz 2021.1 pyhd8ed1ab_0
    - readline 8.1 h05e3726_0
    - scipy 1.6.2 py38h431c0a8_0
    - setuptools 49.6.0 py38h50d1736_3
    - six 1.15.0 pyh9f0ad1d_0
    - sqlite 3.35.3 h44b9ce1_0
    - termcolor 1.1.0 py_2
    - tk 8.6.10 h0419947_1
    - tornado 6.1 py38h5406a74_1
    - twobitreader 3.1.7 pyh864c0ab_1
    - xz 5.2.5 haf1e3a3_1
    - zlib 1.2.11 h7795811_1010
    - zstd 1.4.9 h582d3a0_0
  run:
    - biopython >=1.64,<1.78
    - bowtie
    - cython >=0.22.0
    - fastx_toolkit
    - matplotlib-base >=1.4.0
    - numpy >=1.20.2,<2.0a0
    - pandas >=0.17.0
    - pysam >=0.16.0.1,<0.16.1.0a0
    - python >=3.8,<3.9.0a0
    - python_abi 3.8.* *_cp38
    - scipy >=0.15.1
    - termcolor
    - twobitreader >=3.0.0
    - zlib >=1.2.11,<1.3.0a0
    - zlib >=1.2.11,<1.3.0a0
test:
  commands:
    - counts_in_region -h
    - cs -h
    - get_count_vectors -h
    - make_wiggle -h
    - metagene -h
    - phase_by_size -h
    - psite -h
    - crossmap -h
    - gff_parent_types -h
    - reformat_transcripts -h
    - findjuncs -h
    - slidejuncs -h
  imports:
    - plastid
about:
  home: http://plastid.readthedocs.io/en/latest/
  license: BSD 3-Clause
  summary: plastid is a Python library for genomic analysis -- in particular, high-throughput
    sequencing data
extra:
  copy_test_source_files: true
  final: true
  skip-lints:
    - cython_must_be_in_host
