include/index/PgSAIndexFactory.h
include/readsset/PackedReadsSet.h
include/test/testdata.h
include/suffixarray/SuffixArrayInterface.h
bin/PgSAtest
include/index/PgSAIndexInterface.h
lib/libPgSA.so
include/readsset/DefaultReadsSet.h
include/byteswap.h
include/sais/sais.h
include/helper.h
include/pgsaconfig.h
include/pseudogenome/DefaultPseudoGenome.h
include/suffixarray/DefaultSuffixArray.h
include/suffixarray/SparseSuffixArrayBase.h
include/readsset/ReadsSetBase.h
include/suffixarray/SuffixArrayBase.h
include/pseudogenome/PseudoGenomeBase.h
include/test/PgSATests.h
include/suffixarray/SparseSuffixArrayFactory.h
include/pseudogenome/PseudoGenomeInterface.h
bin/PgSAgen
include/suffixarray/DefaultSuffixArrayFactory.h
include/index/DefaultRevCompPgSAIndex.h
include/pseudogenome/PackedPseudoGenomeBase.h
include/pseudogenome/PackedPseudoGenome.h
include/readsset/ReadsSetInterface.h
include/index/DefaultPgSAIndex.h
include/libdivide.h
include/suffixarray/SparseSuffixArray.h
