// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
// --------------------------------------------------------------------------
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2017.
//
// This software is released under a three-clause BSD license:
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//    notice, this list of conditions and the following disclaimer.
//  * Redistributions in binary form must reproduce the above copyright
//    notice, this list of conditions and the following disclaimer in the
//    documentation and/or other materials provided with the distribution.
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//    may be used to endorse or promote products derived from this software
//    without specific prior written permission.
// For a full list of authors, refer to the file AUTHORS.
// --------------------------------------------------------------------------
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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// --------------------------------------------------------------------------
// $Maintainer: Timo Sachsenberg $
// $Authors: Stephan Aiche$
// --------------------------------------------------------------------------

#ifndef OPENMS_SIMULATION_LABELING_LABELFREELABELER_H
#define OPENMS_SIMULATION_LABELING_LABELFREELABELER_H

#include <OpenMS/SIMULATION/LABELING/BaseLabeler.h>

namespace OpenMS
{

  /**
  @brief Abstract base class for all kinds of labeling techniques
  */
  class OPENMS_DLLAPI LabelFreeLabeler :
    public BaseLabeler
  {
public:

    /// default constructor
    LabelFreeLabeler();

    /// destructor
    virtual ~LabelFreeLabeler();

    /// create new GaussModel object (needed by Factory)
    static BaseLabeler* create()
    {
      return new LabelFreeLabeler();
    }

    /// name of the model (needed by Factory)
    static const String getProductName()
    {
      return "labelfree";
    }

    // redeclaration of virtual methods
    void preCheck(Param& param) const;

    void setUpHook(SimTypes::FeatureMapSimVector& /* channels */);

    void postDigestHook(SimTypes::FeatureMapSimVector& /* features_to_simulate */);

    void postRTHook(SimTypes::FeatureMapSimVector& /* features_to_simulate */);

    void postDetectabilityHook(SimTypes::FeatureMapSimVector& /* features_to_simulate */);

    void postIonizationHook(SimTypes::FeatureMapSimVector& /* features_to_simulate */);

    void postRawMSHook(SimTypes::FeatureMapSimVector& /* features_to_simulate */);

    void postRawTandemMSHook(SimTypes::FeatureMapSimVector& /* features_to_simulate */, SimTypes::MSSimExperiment& /* simulated map */);
  };
} // namespace OpenMS

#endif //#ifndef OPENMS_SIMULATION_LABELING_LABELFREELABELER_H
