# This file created by conda-build 3.21.4
# meta.yaml template originally from:
# /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/mindthegap, last modified Fri Mar 26 14:43:21 2021
# ------------------------------------------------

package:
  name: mindthegap
  version: 2.2.2
source:
  sha256: e0e6c996513a3cde0b4b2a381d9f0ac4eb70669be6b808df3258b2372908ead6
  url: https://github.com/GATB/mindthegap/releases/download/v2.2.2/mindthegap-v2.2.2-Source.tar.gz
build:
  number: '1'
  string: h87af4ef_1
requirements:
  build:
    - bzip2 1.0.8 hc929b4f_4
    - c-ares 1.17.1 h0d85af4_1
    - ca-certificates 2020.12.5 h033912b_0
    - cctools_osx-64 949.0.1 h6407bdd_20
    - clang 11.1.0 h694c41f_0
    - clang-11 11.1.0 default_he082bbe_0
    - clang_osx-64 11.1.0 hb91bd55_0
    - clangxx 11.1.0 default_he082bbe_0
    - clangxx_osx-64 11.1.0 h7e1b574_0
    - cmake 3.19.6 h641592c_0
    - compiler-rt 11.1.0 h654b07c_0
    - compiler-rt_osx-64 11.1.0 h8c5fa43_0
    - expat 2.2.10 h1c7c35f_0
    - krb5 1.17.2 h60d9502_0
    - ld64_osx-64 530 he8994da_20
    - ldid 2.1.2 h7660a38_2
    - libclang-cpp11.1 11.1.0 default_he082bbe_0
    - libcurl 7.75.0 h8ef9fac_0
    - libcxx 11.1.0 habf9029_0
    - libedit 3.1.20191231 h0678c8f_2
    - libev 4.33 haf1e3a3_1
    - libllvm11 11.1.0 hd011deb_0
    - libnghttp2 1.43.0 h07e645a_0
    - libssh2 1.9.0 h52ee1ee_6
    - libuv 1.41.0 hbcf498f_0
    - llvm-tools 11.1.0 hd011deb_0
    - lz4-c 1.9.3 h046ec9c_0
    - make 4.3 h22f3db7_1
    - ncurses 6.2 h2e338ed_4
    - openssl 1.1.1k h0d85af4_0
    - rhash 1.4.1 h35c211d_0
    - tapi 1100.0.11 h9ce4665_0
    - tk 8.6.10 h0419947_1
    - xz 5.2.5 haf1e3a3_1
    - zlib 1.2.11 h7795811_1010
    - zstd 1.4.9 h582d3a0_0
  host:
    - libcxx 11.1.0 habf9029_0
    - zlib 1.2.11 h7795811_1010
  run:
    - libcxx >=11.1.0
    - zlib >=1.2.11,<1.3.0a0
    - zlib >=1.2.11,<1.3.0a0
test:
  commands:
    - MindTheGap fill -help
about:
  home: https://github.com/GATB/mindthegap
  license: file
  license_file: LICENSE
  summary: MindTheGap performs detection and assembly of DNA insertion variants in
    NGS read datasets with respect to a reference genome. MindTheGap can also be used
    as a genome assembly finishing tool, it can fill the gaps between a set of input
    contigs without any a priori on their relative order and orientation.
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:mindthegap
    - doi:10.1093/bioinformatics/btu545
