{% set version = "2.2.2" %}
{% set sha256 = "e0e6c996513a3cde0b4b2a381d9f0ac4eb70669be6b808df3258b2372908ead6" %}

package:
  name: mindthegap
  version: {{ version }} 

build:
  number: 1

source:
  url: https://github.com/GATB/mindthegap/releases/download/v{{ version }}/mindthegap-v{{ version }}-Source.tar.gz
  sha256: {{ sha256 }}

requirements:
  build:
    - make
    - {{ compiler('cxx') }}
    - cmake
  host:
    - zlib
  run:
    - zlib

test:
  commands:
    - MindTheGap fill -help

about:
  home: https://github.com/GATB/mindthegap
  license: file
  license_file: LICENSE
  summary: MindTheGap performs detection and assembly of DNA insertion variants in NGS read datasets with respect to a reference genome. MindTheGap can also be used as a genome assembly finishing tool, it can fill the gaps between a set of input contigs without any a priori on their relative order and orientation.

extra:
  identifiers:
    - biotools:mindthegap
    - doi:10.1093/bioinformatics/btu545
