# This file created by conda-build 3.21.4
# meta.yaml template originally from:
# /Users/distiller/project/recipes/megalodon, last modified Sun Apr 18 07:04:24 2021
# ------------------------------------------------

package:
  name: megalodon
  version: 2.3.0
source:
  sha256: 3c01c840349de11048800d60435b958043e399083806d92aa3eab6c694732149
  url: https://github.com/nanoporetech/megalodon/archive/2.3.0.tar.gz
build:
  entry_points:
    - megalodon = megalodon.__main__:_main
    - megalodon_extras = megalodon_extras.__main__:_main
  number: '1'
  script: /Users/distiller/project/miniconda/conda-bld/megalodon_1618756119096/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold/bin/python
    -m pip install . -vv
  string: py38h68004ad_1
requirements:
  build:
    - cctools_osx-64 949.0.1 h6407bdd_21
    - clang 11.1.0 h694c41f_0
    - clang-11 11.1.0 default_he082bbe_0
    - clang_osx-64 11.1.0 hb91bd55_1
    - clangxx 11.1.0 default_he082bbe_0
    - compiler-rt 11.1.0 h654b07c_0
    - compiler-rt_osx-64 11.1.0 h8c5fa43_0
    - ld64_osx-64 530 he8994da_21
    - ldid 2.1.2 h7660a38_2
    - libclang-cpp11.1 11.1.0 default_he082bbe_0
    - libcxx 11.1.0 habf9029_0
    - libllvm11 11.1.0 hd011deb_2
    - llvm-tools 11.1.0 hd011deb_2
    - tapi 1100.0.11 h9ce4665_0
    - zlib 1.2.11 h7795811_1010
  host:
    - ca-certificates 2020.12.5 h033912b_0
    - certifi 2020.12.5 py38h50d1736_1
    - cython 0.29.23 py38ha048514_0
    - libblas 3.9.0 8_openblas
    - libcblas 3.9.0 8_openblas
    - libcxx 11.1.0 habf9029_0
    - libffi 3.3 h046ec9c_2
    - libgfortran 5.0.0 9_3_0_h6c81a4c_22
    - libgfortran5 9.3.0 h6c81a4c_22
    - liblapack 3.9.0 8_openblas
    - libopenblas 0.3.12 openmp_h54245bb_1
    - llvm-openmp 11.1.0 hda6cdc1_1
    - ncurses 6.2 h2e338ed_4
    - numpy 1.20.2 py38had91d27_0
    - openssl 1.1.1k h0d85af4_0
    - pip 21.0.1 pyhd8ed1ab_0
    - python 3.8.8 h4e93d89_0_cpython
    - python_abi 3.8 1_cp38
    - readline 8.1 h05e3726_0
    - setuptools 49.6.0 py38h50d1736_3
    - sqlite 3.35.4 h44b9ce1_0
    - tk 8.6.10 h0419947_1
    - wheel 0.36.2 pyhd3deb0d_0
    - xz 5.2.5 haf1e3a3_1
    - zlib 1.2.11 h7795811_1010
  run:
    - h5py >=2.2.1
    - mappy >=2.16
    - numpy >=1.9.0
    - ont-fast5-api >=3.2
    - pysam >=0.15
    - python >=3.8,<3.9.0a0
    - python_abi 3.8.* *_cp38
    - scikit-learn
    - scipy >=1.1.0
    - seaborn
    - setuptools
    - tqdm
test:
  commands:
    - megalodon --help
    - megalodon_extras --help
  imports:
    - megalodon
about:
  dev_url: https://github.com/nanoporetech/megalodon
  doc_url: https://nanoporetech.github.io/megalodon/index.html
  home: https://github.com/nanoporetech/megalodon
  license: Mozilla Public License 2.0
  license_family: OTHER
  license_file: LICENCE.txt
  summary: Nanopore modified base and sequence variant detection.
extra:
  copy_test_source_files: true
  final: true
  recipe-maintainers:
    - marcus1487
