# This file created by conda-build 2.1.18
# meta.yaml template originally from:
# /Users/distiller/project/recipes/maker, last modified Fri Mar  9 10:59:28 2018
# ------------------------------------------------

package:
    name: maker
    version: 2.31.9
source:
    fn: maker-2.31.9.tgz.tar.gz
    md5: 63d79e37d25c60d236658f847b74ea18
    url: http://yandell.topaz.genetics.utah.edu/maker_downloads/static/maker-2.31.9.tgz
build:
    noarch: ''
    noarch_python: false
    number: '3'
    string: '3'
requirements:
    build:
        - augustus 3.2.3 boost1.64_bamtools2.4.1_4
        - bamtools 2.4.1 1
        - blast 2.7.1 boost1.64_2
        - boost 1.64.0 py27_4
        - boost-cpp 1.64.0 1
        - bowtie 1.2.0 py27_0
        - bzip2 1.0.6 1
        - ca-certificates 2018.1.18 0
        - certifi 2018.1.18 py27_0
        - exonerate 2.4.0 0
        - expat 2.2.5 0
        - fontconfig 2.12.6 0
        - freetype 2.8.1 0
        - gettext 0.19.8.1 0
        - giflib 5.1.4 0
        - glib 2.55.0 0
        - gmp 6.1.2 0
        - gnutls 3.5.17 0
        - graphviz 2.38.0 7
        - gsl 1.16 0
        - hmmer 3.1b2 3
        - icu 58.2 0
        - infernal 1.1.2 0
        - intel-openmp 2018.0.0 h8158457_8
        - jpeg 9b 2
        - libdb 6.1.26 0
        - libffi 3.2.1 1
        - libgcc 4.8.5 hdbeacc1_10
        - libgd 2.2.5 3
        - libgfortran 3.0.1 h93005f0_2
        - libiconv 1.15 0
        - libidn11 1.33 0
        - libpng 1.6.34 0
        - libtiff 4.0.9 0
        - libuuid 1.0.3 1
        - libwebp 0.5.2 7
        - libxml2 2.9.7 0
        - libxslt 1.1.32 0
        - lp_solve 5.5.2.5 0
        - mir-prefer 0.24 py27_0
        - mkl 2018.0.1 hfbd8650_4
        - mpi 1.0 openmpi
        - ncurses 5.9 10
        - nettle 3.3 0
        - numpy 1.14.1 py27ha726252_2
        - openmpi 3.0.0 1
        - openssl 1.0.2n 0
        - pcre 8.39 0
        - perl 5.22.0.1 0
        - perl-aceperl 1.92 0
        - perl-acme-damn 0.08 pl5.22.0_0
        - perl-algorithm-munkres 0.08 0
        - perl-app-cpanminus 1.7039 pl5.22.0_3
        - perl-appconfig 1.71 0
        - perl-array-compare 2.11 0
        - perl-bio-asn1-entrezgene 1.72 1
        - perl-bio-featureio 1.6.905 0
        - perl-bio-phylo 0.58 0
        - perl-bio-samtools 1.43 0
        - perl-bioperl 1.6.924 pl5.22.0_7
        - perl-bioperl-core 1.6.924 pl5.22.0_2
        - perl-bioperl-run 1.006900 2
        - perl-bit-vector 7.4 0
        - perl-cgi 4.22 3
        - perl-class-inspector 1.28 0
        - perl-class-method-modifiers 2.11 1
        - perl-clone 0.38 0
        - perl-common-sense 3.74 0
        - perl-convert-binary-c 0.78 0
        - perl-convert-binhex 1.125 0
        - perl-crypt-rc4 2.02 0
        - perl-data-stag 0.14 0
        - perl-db-file 1.835 5
        - perl-dbd-pg 3.5.3 0
        - perl-dbd-sqlite 1.50 1
        - perl-dbi 1.640 pl5.22.0_0
        - perl-devel-globaldestruction 0.13 1
        - perl-digest-hmac 1.03 pl5.22.0_1
        - perl-digest-perl-md5 1.9 0
        - perl-email-date-format 1.005 0
        - perl-encode-locale 1.05 pl5.22.0_4
        - perl-error 0.17024 0
        - perl-exporter-tiny 0.042 1
        - perl-extutils-makemaker 6.66 pl5.22.0_2
        - perl-file-copy-recursive 0.38 1
        - perl-file-listing 6.04 0
        - perl-file-sharedir-install 0.10 3
        - perl-file-slurp-tiny 0.004 0
        - perl-file-sort 1.01 pl5.22.0_1
        - perl-file-which 1.20 0
        - perl-font-afm 1.20 0
        - perl-forks 0.36 pl5.22.0_2
        - perl-gd 2.56 3
        - perl-graph 0.9704 0
        - perl-graphviz 2.20 1
        - perl-html-element-extended 1.18 0
        - perl-html-entities-numbered 0.04 0
        - perl-html-formatter 2.14 0
        - perl-html-parser 3.72 pl5.22.0_1
        - perl-html-tableextract 2.13 0
        - perl-html-tagset 3.20 pl5.22.0_1
        - perl-html-tidy 1.56 1
        - perl-html-tree 5.03 0
        - perl-html-treebuilder-xpath 0.14 0
        - perl-http-cookies 6.01 0
        - perl-http-daemon 6.01 0
        - perl-http-date 6.02 pl5.22.0_1
        - perl-http-message 6.11 0
        - perl-http-negotiate 6.01 0
        - perl-image-info 1.38 0
        - perl-image-size 3.300 0
        - perl-inline 0.80 0
        - perl-inline-c 0.76 0
        - perl-io-all 0.86 0
        - perl-io-html 1.001 pl5.22.0_1
        - perl-io-prompt 0.997004 pl5.22.0_0
        - perl-io-sessiondata 1.03 0
        - perl-io-socket-ssl 2.024 0
        - perl-io-string 1.08 pl5.22.0_1
        - perl-io-stringy 2.111 0
        - perl-io-tty 1.12 0
        - perl-ipc-run 0.94 0
        - perl-jcode 2.07 0
        - perl-json 2.90 1
        - perl-json-xs 2.34 0
        - perl-libwww-perl 6.15 0
        - perl-libxml-perl 0.08 0
        - perl-list-moreutils 0.15 pl5.22.0_0
        - perl-lwp-mediatypes 6.02 pl5.22.0_1
        - perl-lwp-protocol-https 6.06 2
        - perl-mailtools 2.14 0
        - perl-math-cdf 0.1 3
        - perl-math-derivative 0.04 0
        - perl-math-random 0.72 0
        - perl-math-spline 0.02 0
        - perl-mime-base64 3.15 pl5.22.0_0
        - perl-mime-lite 3.030 0
        - perl-mime-tools 5.507 0
        - perl-mime-types 2.12 0
        - perl-mldbm 2.05 0
        - perl-module-build 0.4224 pl5.22.0_0
        - perl-module-runtime 0.014 1
        - perl-moo 2.001000 1
        - perl-mozilla-ca 20160104 0
        - perl-net-http 6.09 0
        - perl-net-ssleay 1.84 pl5.22.0_0
        - perl-ntlm 1.09 1
        - perl-ole-storage_lite 0.19 0
        - perl-parse-recdescent 1.967013 0
        - perl-pdf-api2 2.025 2
        - perl-pegex 0.61 0
        - perl-perl-unsafe-signals 0.03 0
        - perl-perlio-gzip 0.19 pl5.22.0_2
        - perl-postscript 0.06 0
        - perl-role-tiny 2.000001 1
        - perl-scalar-list-utils 1.45 2
        - perl-set-scalar 1.29 0
        - perl-soap-lite 1.19 0
        - perl-sort-naturally 1.03 0
        - perl-spreadsheet-parseexcel 0.65 0
        - perl-spreadsheet-writeexcel 2.40 0
        - perl-statistics-descriptive 3.0612 0
        - perl-sub-exporter-progressive 0.001011 1
        - perl-svg 2.64 0
        - perl-svg-graph 0.02 0
        - perl-sys-sigaction 0.23 pl5.22.0_0
        - perl-task-weaken 1.04 0
        - perl-template-toolkit 2.26 0
        - perl-termreadkey 2.32 0
        - perl-test-leaktrace 0.16 pl5.22.0_0
        - perl-test-more 1.001002 pl5.22.0_0
        - perl-test-pod 1.51 0
        - perl-text-soundex 3.05 0
        - perl-threaded 5.22.0 pl5.22.0_12
        - perl-tie-ixhash 1.23 pl5.22.0_1
        - perl-timedate 2.30 0
        - perl-tree-dag_node 1.29 0
        - perl-type-tiny 1.000005 0
        - perl-unicode-map 0.112 0
        - perl-uri 1.71 0
        - perl-want 0.29 pl5.22.0_0
        - perl-www-robotrules 6.02 0
        - perl-xml-dom 1.45 0
        - perl-xml-dom-xpath 0.14 0
        - perl-xml-filter-buffertext 1.01 0
        - perl-xml-libxml 2.0124 0
        - perl-xml-libxslt 1.94 0
        - perl-xml-namespacesupport 1.11 0
        - perl-xml-parser 2.44 4
        - perl-xml-regexp 0.04 0
        - perl-xml-sax 0.99 0
        - perl-xml-sax-base 1.08 0
        - perl-xml-sax-expat 0.51 0
        - perl-xml-sax-writer 0.56 0
        - perl-xml-simple 2.22 0
        - perl-xml-twig 3.49 0
        - perl-xml-writer 0.625 0
        - perl-xml-xpath 1.33 0
        - perl-xml-xpathengine 0.14 0
        - perl-xsloader 0.22 pl5.22.0_0
        - perl-yaml 1.24 0
        - perl-yaml-libyaml 0.66 pl5.22.0_0
        - pip 9.0.1 py27_1
        - postgresql 9.6.7 py27_0
        - python 2.7.14 4
        - readline 7.0 0
        - repeatmasker 4.0.6 pl5.22.0_10
        - rmblast 2.2.28 3
        - samtools 0.1.19 3
        - setuptools 38.5.2 py27_0
        - snap 2013_11_29 0
        - snoscan 0.9b pl5.22.0_1
        - sqlite 3.20.1 2
        - tbb 4.4_20150728 0
        - tidyp 1.04 0
        - tk 8.6.7 0
        - trf 4.09 0
        - trnascan-se 1.3.1 pl5.22.0_3
        - viennarna 2.4.3 0
        - wheel 0.30.0 py27_2
        - xz 5.2.3 0
        - zlib 1.2.11 0
    run:
        - augustus >=3.2.3
        - blast
        - exonerate
        - infernal
        - mir-prefer
        - repeatmasker
        - snap
        - snoscan
        - perl-bioperl
        - perl-bit-vector
        - perl-dbd-pg
        - perl-dbd-sqlite
        - perl-dbi
        - perl-file-which
        - perl-io-all
        - perl-io-prompt
        - perl-inline-c
        - perl-perlio-gzip
        - perl-forks
        - perl-list-moreutils <=0.25
        - perl-perl-unsafe-signals
        - openmpi
        - trnascan-se ==1.3.1
        - postgresql
test:
    commands:
        - maker --version
about:
    home: http://www.yandell-lab.org/software/maker.html
    license: GPL3
    summary: MAKER is a portable and easily configurable genome annotation pipeline.
extra:
    final: true
