# This file created by conda-build 3.21.4
# meta.yaml template originally from:
# /Users/distiller/project/recipes/hatchet, last modified Fri Sep 10 19:03:35 2021
# ------------------------------------------------

package:
  name: hatchet
  version: 0.4.7
source:
  - sha256: 33fc295c3f388c26485647e15ac2453842deb02e549d40d487f905c29b69a5b9
    url: https://github.com/raphael-group/hatchet/archive/v0.4.7.zip
  - sha256: 1d58586f9a33ac7035f51f6a04707248218f70bddbec78cb83f11c986ac652cd
    url: https://packages.gurobi.com/9.0/gurobi9.0.2_mac64.pkg
build:
  number: '0'
  string: py38ha7c6429_0
requirements:
  build:
    - bzip2 1.0.8 h0d85af4_4
    - c-ares 1.17.2 h0d85af4_0
    - ca-certificates 2021.5.30 h033912b_0
    - cctools_osx-64 949.0.1 h6407bdd_22
    - clang 11.1.0 h694c41f_1
    - clang-11 11.1.0 default_he082bbe_1
    - clang_osx-64 11.1.0 hb91bd55_3
    - clangxx 11.1.0 default_he082bbe_1
    - clangxx_osx-64 11.1.0 h7e1b574_3
    - cmake 3.21.2 hdbd2f3e_0
    - compiler-rt 11.1.0 h654b07c_0
    - compiler-rt_osx-64 11.1.0 h8c5fa43_0
    - expat 2.4.1 he49afe7_0
    - krb5 1.19.2 hcfbf3a7_0
    - ld64_osx-64 530 he8994da_21
    - ldid 2.1.2 h7660a38_2
    - libclang-cpp11.1 11.1.0 default_he082bbe_1
    - libcurl 7.78.0 hf45b732_0
    - libcxx 12.0.1 habf9029_0
    - libedit 3.1.20191231 h0678c8f_2
    - libev 4.33 haf1e3a3_1
    - libllvm11 11.1.0 hd011deb_2
    - libllvm12 12.0.1 hd011deb_2
    - libnghttp2 1.43.0 h07e645a_0
    - libssh2 1.10.0 h52ee1ee_0
    - libuv 1.42.0 h0d85af4_0
    - llvm-tools 11.1.0 hd011deb_2
    - lz4-c 1.9.3 he49afe7_1
    - make 4.3 h22f3db7_1
    - ncurses 6.2 h2e338ed_4
    - openssl 1.1.1l h0d85af4_0
    - rhash 1.4.1 h35c211d_0
    - tapi 1100.0.11 h9ce4665_0
    - tk 8.6.11 h5dbffcc_1
    - xz 5.2.5 haf1e3a3_1
    - zlib 1.2.11 h7795811_1010
    - zstd 1.5.0 h582d3a0_0
  host:
    - ca-certificates 2021.5.30 h033912b_0
    - libcxx 12.0.1 habf9029_0
    - libffi 3.3 h046ec9c_2
    - ncurses 6.2 h2e338ed_4
    - openssl 1.1.1l h0d85af4_0
    - python 3.8.10 h0e5c897_0_cpython
    - python_abi 3.8 2_cp38
    - readline 8.1 h05e3726_0
    - setuptools 58.0.4 py38h50d1736_0
    - sqlite 3.36.0 h23a322b_1
    - tk 8.6.11 h5dbffcc_1
    - xz 5.2.5 haf1e3a3_1
    - zlib 1.2.11 h7795811_1010
  run:
    - bcftools
    - biopython
    - libcxx >=11.1.0
    - matplotlib-base
    - pandas
    - psutil
    - pyomo
    - pysam
    - python >=3.8,<3.9.0a0
    - python_abi 3.8.* *_cp38
    - requests
    - samtools
    - scikit-learn
    - scipy
    - seaborn
test:
  imports:
    - hatchet
about:
  description: 'HATCHet is an algorithm to infer allele and clone-specific copy-number

    aberrations (CNAs), clone proportions, and whole-genome duplications

    (WGD) for several tumor clones jointly from multiple bulk-tumor samples

    of the same patient or from a single bulk-tumor sample.

    '
  home: https://github.com/raphael-group/hatchet
  license: BSD-3
  summary: Holistic Allele-specific Tumor Copy-number Heterogeneity
extra:
  copy_test_source_files: true
  final: true
