README.md
setup.py
guidescan/__init__.py
guidescan/bamdata.py
guidescan/ces_compute.py
guidescan/ces_database_to_database_transfer.py
guidescan/ces_insert.py
guidescan/cutting_efficiency_processer.py
guidescan/cutting_specificity_processer.py
guidescan/guidequery.py
guidescan/guides.py
guidescan/kmers.py
guidescan/processer.py
guidescan/tss_compute.py
guidescan/util.py
guidescan.egg-info/PKG-INFO
guidescan.egg-info/SOURCES.txt
guidescan.egg-info/dependency_links.txt
guidescan.egg-info/entry_points.txt
guidescan.egg-info/requires.txt
guidescan.egg-info/top_level.txt
guidescan/CFD_scoring/mismatch_score.pkl
guidescan/CFD_scoring/pam_scores.pkl
guidescan/Rule_Set_2_scoring/saved_models/V3_model_full.pickle
guidescan/Rule_Set_2_scoring/saved_models/V3_model_nopos.pickle
guidescan/annotation_bed/ce11/ce11_exons.bed
guidescan/annotation_bed/ce11/ce11_exons_refseq.bed
guidescan/annotation_bed/danRer10/danRer10_exons.bed
guidescan/annotation_bed/danRer10/danRer10_exons_refseq.bed
guidescan/annotation_bed/dm6/dm6_exons.bed
guidescan/annotation_bed/dm6/dm6_exons_completeAnnotation_refseq.bed
guidescan/annotation_bed/dm6/dm6_exons_refseq.bed
guidescan/annotation_bed/hg38/hg38_exons.bed
guidescan/annotation_bed/hg38/hg38_exons_completeAnnotation_refseq.bed
guidescan/annotation_bed/hg38/hg38_exons_refseq.bed
guidescan/annotation_bed/mm10/mm10_exons.bed
guidescan/annotation_bed/mm10/mm10_exons_completeAnnotation_refseq.bed
guidescan/annotation_bed/mm10/mm10_exons_refseq.bed
guidescan/annotation_bed/sacCer3/sacCer3_exons.bed
guidescan/annotation_bed/sacCer3/sacCer3_exons_refseq.bed
trie/trie.c
trie/triemodule.c