Motif	Factor	Evidence	Curated
ATGCCCTGAGGC_AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	AP2alpha	ChIP-seq	Y
NNVVCAGCTGBN_Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	Ascl1	ChIP-seq	Y
GATGACGTCA_Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	ATF1	ChIP-seq	Y
NRRTGACGTCAT_Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	Atf2	ChIP-seq	Y
DATGASTCATHN_Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	ATF3	ChIP-seq	Y
MTGATGCAAT_Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	Atf4	ChIP-seq	Y
NGRTGACGTCAY_Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	Atf7	ChIP-seq	Y
VNAVCAGCTGGC_Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	Atoh1	ChIP-seq	Y
AWWNTGCTGAGTCAT_Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	Bach1	ChIP-seq	Y
TGCTGAGTCA_Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	Bach2	ChIP-seq	Y
TTRAGTGSYK_Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	Bapx1	ChIP-seq	Y
DATGASTCAT_BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	BATF	ChIP-seq	Y
NNNCTTTCCAGGAAA_Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	Bcl6	ChIP-seq	Y
KCACGTGMCN_bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	BHLHE40	ChIP-seq	Y
GNCACGTG_BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	Bmal1	ChIP-seq	Y
NHAACBGYYV_BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	BMYB	ChIP-seq	Y
ANTTMRCASBNNNGTGYKAAN_Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	Brachyury	ChIP-seq	Y
TATGCWAATBAV_Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	Brn1	ChIP-seq	Y
ATGAATATTC_Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	Brn2	ChIP-seq	Y
GTCATAAAAN_Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	Cdx2	ChIP-seq	Y
ATTGCATCAT_Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	Chop	ChIP-seq	Y
GHCACGTG_CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	Clock	ChIP-seq	Y
NCCACGTG_c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	cMyc	ChIP-seq	Y
GNCCACGTGG_c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	cMyc	ChIP-seq	Y
GCTAATCC_CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	Crx	ChIP-seq	Y
ATAGTGCCACCTGGTGGCCA_CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	CTCF	ChIP-seq	Y
HNRAATCAAT_Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	Cux2	ChIP-seq	Y
TWGHWACAWTGTWDC_DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	DMRT1	ChIP-seq	Y
YDGHTACAWTGTADC_DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	DMRT6	ChIP-seq	Y
ANACAGCTGC_E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	E2A	ChIP-seq	Y
CWGGCGGGAA_E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	E2F1	ChIP-seq	Y
GGCGGGAAAH_E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	E2F4	ChIP-seq	Y
GGCGGGAARN_E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	E2F6	ChIP-seq	Y
VDTTTCCCGCCA_E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	E2F7	ChIP-seq	Y
GGTCCCTAGGGA_EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	EBF	ChIP-seq	Y
GGYAGCAYDTGCTDCCCNNN_EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	EBNA1	ChIP-seq	Y
TGCGTGGGYG_Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	Egr1	ChIP-seq	Y
NGCGTGGGCGGR_Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	Egr2	ChIP-seq	Y
AVCAGGAAGT_EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	EHF	ChIP-seq	Y
AACCGGAAGT_ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	ELF1	ChIP-seq	Y
ACVAGGAAGT_ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ELF5	ChIP-seq	Y
HACTTCCGGY_Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	Elk1	ChIP-seq	Y
NRYTTCCGGY_Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	Elk4	ChIP-seq	Y
ATTAACACCT_Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	Eomes	ChIP-seq	Y
ACAGGAAGTG_ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ERG	ChIP-seq	Y
CAAAGGTCAG_Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	Erra	ChIP-seq	Y
GTGACCTTGA_Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	Esrrb	ChIP-seq	Y
ACAGGAAGTG_ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ETS1	ChIP-seq	Y
AACCGGAAGT_ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	ETV1	ChIP-seq	Y
NATGASTCABNN_Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	Fosl2	ChIP-seq	Y
AAAGTAAACA_FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	FOXA1	ChIP-seq	Y
AAAGTAAACA_FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	FOXA1	ChIP-seq	Y
CTTGTTTACATA_Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	Foxa2	ChIP-seq	Y
NNTGTGGATTSS_Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	FOXH1	ChIP-seq	Y
SCHTGTTTACAT_FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	FOXK2	ChIP-seq	Y
WWTRTAAACAVG_FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	FoxL2	ChIP-seq	Y
TRTTTACTTW_FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	FOXM1	ChIP-seq	Y
CTGTTTAC_Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	Foxo1	ChIP-seq	Y
DGTAAACA_Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	Foxo3	ChIP-seq	Y
NYYTGTTTACHN_FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	FOXP1	ChIP-seq	Y
NNATGASTCATH_Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	Fra1	ChIP-seq	Y
GGATGACTCATC_Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	Fra2	ChIP-seq	Y
AGGTCANTGACCTN_FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	FXR	ChIP-seq	Y
AACCGGAAGT_GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	GABPa	ChIP-seq	Y
NCCTTATCTC_Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	GATA2	ChIP-seq	Y
AGATGKDGAGATAAG_GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	Gata3	ChIP-seq	Y
AGATSTNDNNDSAGATAASN_GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	Gata3	ChIP-seq	Y
AGATAASR_GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	Gata3	ChIP-seq	Y
NBWGATAAGR_Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	Gata4	ChIP-seq	Y
YCTTATCTBN_Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	GATA6	ChIP-seq	Y
CAGATAAGGN_Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	GATA1	ChIP-seq	Y
AAATCACTGC_Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	Gfi1b	ChIP-seq	Y
CGTGGGTGGTCC_GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	GLI3	ChIP-seq	Y
VAGRACAKWCTGTYC_GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	GRE	ChIP-seq	Y
AAACYKGTTWDACMRGTTTB_GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	GRHL2	ChIP-seq	Y
RGGATTAR_GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	GSC	ChIP-seq	Y
VCAGCTGBNN_HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	Heb	ChIP-seq	Y
TACGTGCV_HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	HIF1a	ChIP-seq	Y
RTACGTGC_HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	HIF1b	ChIP-seq	Y
GCACGTACCC_HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	HIF2a	ChIP-seq	Y
CAGAGGNCAAAGTCCA_HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	HNF4a	ChIP-seq	Y
NTATYGATCH_HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	Hnf6	ChIP-seq	Y
GYCATCMATCAT_HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	Hoxa2	ChIP-seq	Y
GGCCATAAATCA_HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	Hoxa9	ChIP-seq	Y
TTTTATKRGG_HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	HOXB13	ChIP-seq	Y
TGATTRATGGCY_Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	Hoxb4	ChIP-seq	Y
GGCCATAAATCA_Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	Hoxc9	ChIP-seq	Y
NCYAATAAAA_HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	Hoxd13	ChIP-seq	Y
GAAAGTGAAAGT_IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	IRF1	ChIP-seq	Y
GAAASYGAAASY_IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	IRF2	ChIP-seq	Y
ACTGAAACCA_IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	IRF4	ChIP-seq	Y
CTAATKGV_Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	Isl1	ChIP-seq	Y
ATGACGTCATCN_JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	JunD	ChIP-seq	Y
NRGCCCCRCCCHBNN_KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	Klf3	ChIP-seq	Y
GCCACACCCA_Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	Klf4	ChIP-seq	Y
DGGGYGKGGC_KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	KLF5	ChIP-seq	Y
GCCACRCCCACY_Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	Klf9	ChIP-seq	Y
NNYTAATTAR_Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	Lhx1	ChIP-seq	Y
TAATTAGN_Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	Lhx2	ChIP-seq	Y
ADBTAATTAR_Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	Lhx3	ChIP-seq	Y
TGCTGACTCA_MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	MafA	ChIP-seq	Y
HWWGTCAGCAWWTTT_MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	MafF	ChIP-seq	Y
GCTGASTCAGCA_MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	MafK	ChIP-seq	Y
ACCACGTGGTCN_Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	Max	ChIP-seq	Y
GGGGGGGG_Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	Maz	ChIP-seq	Y
CCAAAAATAG_Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	Mef2a	ChIP-seq	Y
DCYAAAAATAGM_Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	Mef2c	ChIP-seq	Y
GCTATTTTTAGC_Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	Mef2d	ChIP-seq	Y
VGCTGWCAVB_Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	Meis1	ChIP-seq	Y
RTCATGTGAC_MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	MITF	ChIP-seq	Y
TGGCAGTTGG_AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	AMYB	ChIP-seq	Y
GGCVGTTR_MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	Myb	ChIP-seq	Y
BAACAGCTGT_Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	Myf5	ChIP-seq	Y
AGCAGCTGCTGC_MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	MyoD	ChIP-seq	Y
AACAGCTG_MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	MyoG	ChIP-seq	Y
GGCCATTAAC_Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	Nanog	ChIP-seq	Y
GCCATCTGTT_NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	NeuroD1	ChIP-seq	Y
CTTGGCACNGTGCCAA_NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	NF1	ChIP-seq	Y
GATGACTCAGCA_NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	NFE2	ChIP-seq	Y
RSCACTYRAG_Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	Nkx2.1	ChIP-seq	Y
BTBRAGTGSN_Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	Nkx2.2	ChIP-seq	Y
AASCACTCAA_Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	Nkx2.5	ChIP-seq	Y
AAGCACTTAA_Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	Nkx3.1	ChIP-seq	Y
GKTAATGR_Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	Nkx6.1	ChIP-seq	Y
GNCCACGTGG_n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	nMyc	ChIP-seq	Y
KCCACGTGAC_NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	NPAS2	ChIP-seq	Y
NVCACGTG_NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NPAS	ChIP-seq	Y
TTCAAGGTCA_Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	Nr5a2	ChIP-seq	Y
CTGCGCATGCGC_NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	NRF1	ChIP-seq	Y
HTGCTGAGTCAT_Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	Nrf2	ChIP-seq	Y
ATATGCAAAT_Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	Oct2	ChIP-seq	Y
ATTTGCATAA_Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	Oct4	ChIP-seq	Y
RCCATMTGTT_Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	Olig2	ChIP-seq	Y
NYTAATCCYB_Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	Otx2	ChIP-seq	Y
AACATGCCCAGACATGCCCN_p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	p53	ChIP-seq	Y
NNNGCATGTCCNGACATGCC_p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	p63	ChIP-seq	Y
GCAGCCAAGCGTGACC_PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	PAX5	ChIP-seq	Y
GTCACGCTCNCTGA_PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	PAX5	ChIP-seq	Y
NGTGTTCAVTSAAGCGKAAA_PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	Pax6	ChIP-seq	Y
NTAATTDGCYAATTANNWWD_Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	Pax7	ChIP-seq	Y
TAATCHGATTAC_Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	Pax7	ChIP-seq	Y
TAATCAATTA_Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	Pax7	ChIP-seq	Y
GTCATGCHTGRCTGS_Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	Pax8	ChIP-seq	Y
GSCTGTCACTCA_PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	PBX1	ChIP-seq	Y
CCTGTCAATCAN_Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	PBX3	ChIP-seq	Y
TCATCAATCA_Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	Pdx1	ChIP-seq	Y
AAGAACATWHTGTTC_PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	PGR	ChIP-seq	Y
YTAATYNRATTA_Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	Phox2a	ChIP-seq	Y
ATGMATATDC_Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	Pit1	ChIP-seq	Y
TAATCCCN_Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	Pitx1	ChIP-seq	Y
AGGTCTCTAACC_PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	PRDM14	ChIP-seq	Y
ACTTTCACTTTC_PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	PRDM1	ChIP-seq	Y
VAGRACAKNCTGTBC_PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	PR	ChIP-seq	Y
ACAGCTGTTN_Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	Ptf1a	ChIP-seq	Y
AGAGGAAGTG_PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	PU.1	ChIP-seq	Y
AGGTCAAGGTCA_RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	RARg	ChIP-seq	Y
GTTGCCATGGCAACM_Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	RFX2	ChIP-seq	Y
SCCTAGCAACAG_Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	Rfx5	ChIP-seq	Y
AAACCACAAA_RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	RUNX1	ChIP-seq	Y
NWAACCACADNN_RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	RUNX2	ChIP-seq	Y
TAGGGCAAAGGTCA_RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	RXR	ChIP-seq	Y
ANCAGCTG_SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	Scl	ChIP-seq	Y
GKVTCADRTTWC_Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	Six1	ChIP-seq	Y
GWAAYHTGAKMC_Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	Six2	ChIP-seq	Y
CTGTCTGG_Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	SMAD2	ChIP-seq	Y
TWGTCTGV_Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	Smad3	ChIP-seq	Y
VBSYGTCTGG_Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	SMAD4	ChIP-seq	Y
RAACAATGGN_Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	Sox15	ChIP-seq	Y
CCCATTGTTC_Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	Sox2	ChIP-seq	Y
CCWTTGTY_Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	Sox3	ChIP-seq	Y
YCTTTGTTCC_Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	Sox4	ChIP-seq	Y
CCATTGTTNY_Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	Sox6	ChIP-seq	Y
AGGVNCCTTTGT_Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	SOX9	ChIP-seq	Y
ACATCCTGGT_SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	SPDEF	ChIP-seq	Y
AAAGRGGAAGTG_SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	SPIB	ChIP-seq	Y
ATCACCCCAT_Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	Srebp1a	ChIP-seq	Y
CGGTCACGCCAC_Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	Srebp2	ChIP-seq	Y
NATTTCCNGGAAAT_STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	STAT1	ChIP-seq	Y
CTTCCGGGAA_Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	Stat3	ChIP-seq	Y
NTTTCCAGGAAA_STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	Stat4	ChIP-seq	Y
ATTTCTNAGAAA_STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	Stat5	ChIP-seq	Y
TTCCKNAGAA_STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	Stat6	ChIP-seq	Y
ANTTCTTAAGAA_STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	Stat6	ChIP-seq	Y
AGGTGTGAAM_Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	Tbet	ChIP-seq	Y
GGTGYTGACAGS_Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	Tbx20	ChIP-seq	Y
AGGTGTCA_Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	Tbx5	ChIP-seq	Y
ACAGCTGCTG_Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	Tcf12	ChIP-seq	Y
NAACAGCTGG_Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	Tcf21	ChIP-seq	Y
ACATCAAAGG_Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	Tcf3	ChIP-seq	Y
ACATCAAAGGGA_Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	Tcf4	ChIP-seq	Y
NAAACCGGTTCAAACCGGTT_Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	Tcfcp2l1	ChIP-seq	Y
CCWGGAATGY_TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	Tead2	ChIP-seq	Y
CCWGGAATGY_TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	Tead4	ChIP-seq	Y
YTGWCADY_Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	Tgif1	ChIP-seq	Y
TGTCANYT_Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	Tgif2	ChIP-seq	Y
GAGGTCAAAGGTCA_TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	TR4	ChIP-seq	Y
GGTCANYTGAGGWCA_THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	THRa	ChIP-seq	Y
GGTCACGTGA_USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	Usf1	ChIP-seq	Y
GTCACGTGGT_Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	Usf2	ChIP-seq	Y
GGNTCTCGCGAGAAC_ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	ZBTB33	ChIP-seq	Y
GGGGCTYGKCTGGGA_Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	Zfp809	ChIP-seq	Y
AGGCCTGG_ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	Zfx	ChIP-seq	Y
AAGGKGRCGCAGGCA_ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	ZNF165	ChIP-seq	Y
CNGTCCTCCC_Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	Znf263	ChIP-seq	Y
AGGCCTAG_ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	ZNF711	ChIP-seq	Y
