| cachedas

## Wiki

The master copies of EMBOSS documentation are available at http://emboss.open-bio.org/wiki/Appdocs on the EMBOSS Wiki.

Please help by correcting and extending the Wiki pages.

## Function

Generate server cache file for DAS servers or for the DAS registry

## Description

Contacts the DAS registry to find DAS servers and writes database definitions for them to a server cache file.

## Usage

Here is a sample session with cachedas

    % cachedas -servername tdas -auto -cachefile ~/.embossdata/qatests.server.dasregistry

    host = www.dasregistry.org
    path = /das/sources
    port = 80
    DAS sources and descriptions

    DS_112                         structure
    A reference server  for protein  structure  annotations. Serves  3D coordinates of  protein structures.
    DS_114                         signalp
    SignalP
    (http://www.cbs.dtu.dk/services/SignalP)
    predictions for UniProt.
    DS_115                         netphos
    NetPhos
    (http://www.cbs.dtu.dk/services/NetPhos)
    predictions for UniProt.
    DS_118                         prop
    ProP
    (http://www.cbs.dtu.dk/services/ProP)
    predictions for UniProt.
    DS_119                         transmem_pred
    Membrane protein
    annotation. Presenty
    This DAS server
    contains UNIPROT and
    IPI human proteins.
    The annotation si
    done using 4
    different
    predictors:
    TMHMM2.0, MEMSAT,
    ENSEMBLE_1.0 and
    PRODIV_TMHMM_0.91
    DS_120                         Uniprot 2010_09
    SUPERFAMILY domain annotation for Uniprot 2010_09.
    DS_121                         secretomep
    SecretomeP
    (http://www.cbs.dtu.dk/services/SecretomeP)
    predictions for UniProt.
    DS_126                         Compara Phenotypes
    Phenotypes linked through homologues and protein families
    DS_129                         Takifugu rubripes 59_4m (all transcripts)
    SUPERFAMILY domain annotation for Takifugu rubripes 59_4m (all transcripts).
    DS_133                         cbs_ptm
    Aggregation server for CBS predictions
    related to post-translational
    modifications of proteins.
    DS_134                         cbs_func
    Aggregation server for CBS predictions
    related to protein function and structure.
    DS_146                         ensp_pdb_mapping
    If you click on a feature of  this DAS track, SPICE can be launched  from ENSEMBL. - Mapping of ENSP  protein sequences to  protein structures.  Based on the Compara  ENSP - UniProt and  the MSD - UniProt to  PDB mapping.
    DS_150                         s3dm
    Small hydrogen
    bonded motifs, beta
    turn like.
    DS_154                         nscsnp deleterious
    Machine learning
    approach used
    SWISSPROT variants
    annotated as
    disease/neutral as
    training dataset.
    Predictions made on
    all ENSEMBL nscSNPs
    as to their disease
    status
    PMID: 16630345
    DS_180                         IMGT DAS Sources
    Homo sapiens IG and TR genes located
    using IMGT reference sequences.
    DS_181                         snp_hsa/bioinfo.cipf

    DS_182                         ens_zfish7_array
    ens_zfish7_array
    DS_183                         ens_zfish7_enhancer
    ens_zfish7_enhancer
    DS_187                         lipop
    LipoP
    (www.cbs.dtu.dk/ser
    vices/LipoP)
    predictions for
    UniProt.
    DS_188                         netnes
    NetNES
    (www.cbs.dtu.dk/ser
    vices/NetNES)
    predictions for
    UniProt.
    DS_190                         ens_zfish7_tilling
    ens_zfish7_tilling
    DS_191                         hsa35pep
    A reference and  annotation server  for Ensembl  peptides. Provides exon structure and  SNPs as features
    DS_192                         alig_uniprot_ensp
    an alignment server that provides alignments between Ensembl peptides (ENSP) and UniProt
    DS_193                         ens_35_segdup_washu
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_194                         ens_35_segdup_toronto
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_195                         ens_35_segdup_wssd
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_196                         ens_35_segdup_sanger
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_197                         ens_35_segdup_washufilt
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_199                         CSA - literature
    Catalytic Site Atlas (http://www.ebi.ac.uk/thornton-srv/databases/CSA/) literature annotations mapped onto Uniprot.
    DS_200                         CSA - extended
    Catalytic Site Atlas (http://www.ebi.ac.uk/thornton-srv/databases/CSA/) literature annotations extended to putative sites by homology.
    DS_210                         SMART
    SMART domain
    annotations for
    Uniprot/Ensembl
    DS_212                         FunCUT
    FunCUT is a method for
    the automatic
    annotation of
    protein function
    based on family
    identification.
    DS_216                         SAS protein binding
    Putative protein-protein binding sites by homology with those observed in crystallized protein structures.
    DS_217                         SAS ligand binding
    Putative ligand binding sites by homology with those observed in crystallized protein structures.
    DS_218                         SAS DNA binding
    Putative protein-DNA binding sites by homology with those observed in crystallized protein structures.
    DS_222                         ens_ncbi_35_omimg
    OMIM morbidmap data mapped to NCBI35 assembly locations
    DS_224                         toronto_poly
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_226                         GENCODE sequences
    ENCODE peptide reference server.
    DS_227                         GENCODE alignments
    Local and global gapped alignments with UniProt and UniParc using Exonerate 1.0.
    DS_228                         GENCODE Pfam
    Putative domains predicted using Pfam HMMs on ENCODE peptides.
    DS_229                         GENCODE PDBsum
    Structurally derived information from PDBsum mapped by homology to ENCODE peptides (http://www.ebi.ac.uk/thornton-srv/ENCODE/pdbsum.html).
    DS_237                         3DEM_Reference
    Entries are 3D electron microscopy density maps of
    macromolecular complexes and subcellular structures
    from EMDB, the Electron Microscopy Data Base
    (http://www.emdatabank.org).
    DS_238                         3D-EM_EMDB
    Annotation server
    for 3D-EM volume
    data. Most textual
    data parsed from
    EMDB.
    DS_239                         3DEM_Alignment
    Alignment DAS service for 3D electron microscopy.
    This service provides alignment for Volume Map -
    PDBresnum DAS coordinate systems, based in 3d-EM
    Hybrid models, as stored in the EBDataBank.
    DS_241                         pfam
    The Pfam DAS services offers sequence, feature and types capabilities. The features response returns Pfam-A, Pfam-B domains and other features like Active site, transmembrane region, disulfide bridges, coiled coil, signal peptide and low complexity region for the sequences. The sequence database (pfamseq) is the same as the current version of Pfam. It is essentially comprised of Uniprot with artificial chimeric sequences removed.
    DS_248                         HGNC
    The HGNC (HUGO Gene Nomenclature
    Committee) DAS Reference Server serves
    up-to-date approved gene symbols and
    names for human genes from the latest
    HGNC dataset, mapped via Entrez Gene ID.
    DS_251                         Ensembl Human Genes
    The Ensembl human Gene_ID reference source, serving sequences and non-location features.
    DS_312                         ens_zfish7_baxendale_est
    ens_zfish7_baxendale_est
    DS_313                         ens_zfish7_carp_est
    ens_zfish7_carp_est
    DS_327                         InterPro
    InterPro
    (http://www.ebi.ac.uk/interpro/), a
    database of protein families, domains
    and functional sites in which
    identifiable features found in known
    proteins can be applied to unknown
    protein sequences.  This data source
    contains all InterPro member database
    signature matches to UniProtKB protein
    sequences.
    DS_334                         GSC_mRNA
    Comparison between human and tetraodon
    genomes and Genoscope mRNAs sequences
    (for details see
    http://www.genoscope.cns.fr/cgi-bin/ggb/BioSapiens/gbrowse/GSC_mRNA?help=citations).
    DS_335                         ExoFish
    Exofish (Exon Finding by Sequences
    Homology,
    http://www.genoscope.cns.fr/externe/tetraodon/what_exofish.html)
    is a genomic tool based on the
    assumption that coding regions are more
    conserved than non-coding regions
    through evolution. Therefore, if it
    compare the genomes of two species,
    regions of homology should reveal coding
    regions. Exofish is performed with
    sequences of Tetraodon nigroviridis, and
    calibrated to annotate human genome.
    DS_337                         viraldas_hiv1_hxb2
    The ViralDAS Server for HIV-1 is the
    first DAS Server for a viral genome. It
    was specifically adapted from the
    default DAS server type to meet the
    requirements posed by a viral genome: in
    addition to the genome, transcripts and
    proteins which are usually found in
    eukaryotic DAS servers, it has been
    enhanced to display polyproteins and
    their cleaved products.
    DS_341                         everest
    A positional automatic identification
    and clustering of protein domains.
    DS_342                         protonet
    ProtoNet
    (http://www.protonet.cs.huji.ac.il)
    provides automatic hierarchical
    classification of protein sequences
    (non-positional protein annotations).
    DS_359                         Phobius
    Phobius - combined prediction of
    transmembrane topology and signal
    peptides for Uniprot.
    http://phobius.cgb.ki.se/ or
    http://phobius.binf.ku.dk/
    DS_401                         PPDB_das
    PPDB (http://ppdb.tc.cornell.edu) is a
    specialized proteome database dedicated
    to plant plastids. It is a joint project
    between Klaas J. van Wijk Lab and the
    Computational Biology Service Unit of
    Cornell University. The main objective
    is to provide a centralized, curated,
    data deposit for predicted and
    experimentally determined plastid
    proteins in Arabidopsis thaliana and
    maize (Zea mays), their annotated
    functions, as well as their experimental
    and predicted molecular and biophysical
    properties. All gene models in the
    Arabidopsis nuclear and organellar
    genomes as annotated by TAIR, as well as
    all maize EST assemblies (ZmGI) and
    maize genome sequence assemblies (AZM)
    as annotated by TIGR.
    The das server of PPDB provide the
    peptide sequences that are identified in
    each protein sequences.
    DS_405                         SNPbox
    SNPbox analysis of all Ensembl exons for
    homo sapiens
    DS_406                         OMA
    OMA (Orthology Prediction from ETH Zurich)
    DS_407                         pfamFullAlign
    Retrieves the full sequence alignments for a Pfam entry.
    DS_408                         pfamSeedAlign
    Retrieves the seed sequence alignments for a Pfam entry.
    DS_409                         uniprot
    DAS 1 reference server for sequence and
    features from UniProt. UniProt
    (Universal Protein Resource) is the
    worlds most comprehensive catalog of
    information on proteins. It is a
    central repository of protein sequence
    and function created by joining the
    information contained in Swiss-Prot,
    TrEMBL, and PIR. Alternative to the
    'aristotle' dsn on the same DAS server.
    Note: New version launched on
    05/09/2008. Support for keywords(KW) and
    comments(CC). Ontologies have also been
    introduced into the annotations.
    DS_410                         IPI
    DAS 1 reference server for sequence and
    features from IPI.  IPI provides a top
    level guide to the main databases that
    describe the proteomes of higher
    eukaryotic organisms. IPI: 1.
    effectively maintains a database of
    cross references between the primary
    data sources 2. provides minimally
    redundant yet maximally complete sets of
    proteins for featured species (one
    sequence per transcript) 3. maintains
    stable identifiers (with incremental
    versioning) to allow the tracking of
    sequences in IPI between IPI releases.
    IPI is updated monthly in accordance
    with the latest data released by the
    primary data sources.  Alternative to
    the aristotle dsn on the same DAS
    server (DS_109)
    DS_411                         IPI Tryptic Peptides
    Theoretical tryptic peptides based upon
    a complete and successful digest of the
    requested proteins with trypsin.
    DS_412                         UniProt GO Annotation
    The GOA project aims to provide
    high-quality Gene Ontology (GO)
    annotations to proteins in the UniProt
    Knowledgebase (UniProtKB) and
    International Protein Index (IPI) and is
    a central dataset for other major
    multi-species databases; such as Ensembl
    and NCBI.
    DS_413                         UniProt Tryptic Peptides
    Theoretical tryptic peptides based upon
    a complete and successful digest of the
    requested proteins with trypsin.
    DS_414                         uniparc
    UniProt Archive (UniParc) is part of
    UniProt project. It is a non-redundant
    archive of protein sequences extracted
    from public databases
    UniProtKB/Swiss-Prot, UniProtKB/TrEMBL,
    PIR-PSD, EMBL, EMBL WGS, Ensembl, IPI,
    PDB, PIR-PSD, RefSeq, FlyBase, WormBase,
    H-Invitational Database, TROME database,
    European Patent Office proteins, United
    States Patent and Trademark Office
    proteins (USPTO) and Japan Patent Office
    proteins.
    DS_415                         RSBP Parts
    RSBP Parts
    DS_438                         Canis_familiaris.VEGA-clone.transcript
    Annotation source (returns clones) for Canis_familiaris transcript
    DS_439                         Canis_familiaris.VEGA-clone.translation
    Annotation source (returns clones) for Canis_familiaris translation
    DS_440                         Sus_scrofa.VEGA-clone.transcript
    Annotation source (returns clones) for Sus_scrofa transcript
    DS_441                         Sus_scrofa.VEGA-clone.translation
    Annotation source (returns clones) for Sus_scrofa translation
    DS_442                         Cosmic Transcripts
    Transcripts from Cosmic
    DS_443                         Cosmic Transcripts
    Transcripts from Cosmic mapped to Human NCBI 36
    DS_444                         Cosmic Mutations
    Mutations from Cosmic
    DS_445                         Cosmic Mutations
    Mutations from Cosmic mapped to Human NCBI 36
    DS_490                         HUGO text mining
    PubMed text-mining via HUGO symbol
    DS_493                         eQTL cis RI fat
    Expression Quantitative Trait Loci (cis) for Rattus norvegicus
    DS_494                         eQTL cis RI kidney
    Expression Quantitative Trait Loci (cis) for Rattus norvegicus
    DS_495                         eQTL trans RI fat
    Expression Quantitative Trait Loci (trans) for Rattus norvegicus
    DS_496                         eQTL trans RI kidney
    Expression Quantitative Trait Loci (trans) for Rattus norvegicus
    DS_497                         Sjoblom
    Breast and Colon Cancer associated
    Mutations
    described  by Sjoblom et al. (Science.
    2006,314(5797):268-74)
    DS_498                         HomoMINT
    Persico, M. et al. (2005). HomoMINT:
    an inferred human network based on
    orthology mapping of protein
    interactions discovered in model
    organisms. BMC Bioinformatics, 6 Suppl
    4:S21.
    DS_499                         CCSB-HI1
    Rual, J.-F. et al. (2005). Towards a
    proteome-scale map of the human
    protein-protein interaction network.
    Nature, 437(7062):1173-1178.
    DS_500                         Sanger
    Lehner, B. and Fraser, A. G. (2004). A
    first-draft human protein interaction
    map. Genome Biol, 5(9):R63.
    DS_501                         Sanger-core
    Lehner, B. and Fraser, A. G. (2004). A
    first-draft human protein interaction
    map. Genome Biol, 5(9):R63.
    DS_502                         POINT
    Huang, T.-W. et al. (2004). POINT: a
    database for the prediction of
    protein-protein interactions based on
    the orthologous interactome.
    Bioinformatics, 20(17):3273-3276.
    DS_503                         OPHID
    Brown, K. R. and Jurisica, I. (2005).
    Online predicted human interaction
    database. Bioinformatics, 21(9):2076-2082.
    DS_504                         MDC
    Stelzl, U. et al. (2005). A human
    protein-protein interaction network: a
    resource for annotating the proteome.
    Cell, 122(6):957-968.
    DS_505                         HiMAP
    Rhodes, D. R. et al. (2005).
    Probabilistic model of the human
    protein-protein interaction network. Nat
    Biotechnol, 23(8):951-959.
    DS_506                         HiMAP-core
    Rhodes, D. R. et al. (2005).
    Probabilistic model of the human
    protein-protein interaction network. Nat
    Biotechnol, 23(8):951-959.
    DS_507                         Bioverse
    McDermott, J. et al. (2005). Functional
    annotation from predicted protein
    interaction networks. Bioinformatics,
    21(15):3217-3226.
    DS_509                         zTrap
    Gene and enhancer trapping in zebrafish
    DS_510                         HMMTOP
    HMMTOP 2.1 - prediction of transmembrane
    helices and topology of proteins.

    Written by Gabor E. Tusnady

    DS_511                         PHDhtm
    PHDhtm 2.0 - neural-network-based
    transmembrane predictor.

    Written by Burkhard Rost
    DS_513                         toppred
    Toppred 1.0 - transmembrane topology
    predictor.

    Written by Eric Deveaud and Katja
    Schuerer, based on an algorithm by
    Gunnar von Heijne.
    DS_517                         PHDsec
    PHDsec 2.0 - neural-network-based
    secondary structure predictor. Written
    by Burkhard Rost.
    DS_518                         PHDacc
    PHDacc 2.0 - neural-network-based
    solvent accessibility predictor. Written
    by Burkhard Rost.
    DS_524                         ECARUCA
    Registered ECARUCA abberations smaller
    than 30Mb
    DS_525                         Phosida
    Phosida - Phosphorylation Site Database
    DS_526                         3did
    Stein et al. (2005). 3did: interacting
    protein domains of known
    three-dimensional structure. Nucleic
    Acids Res, 33(Database issue):D413–D417.
    DS_527                         interdom
    Ng et al. (2003). Integrative approach
    for computationally inferring protein
    domain interactions. Bioinformatics,
    19(8):923–929.
    DS_528                         ldsc
    Lee et al. (2006). An integrated
    approach to the prediction of
    domain-domain interactions. BMC
    Bioinformatics, 7:269.
    DS_529                         ldsc-core
    Lee et al. (2006). An integrated
    approach to the prediction of
    domain-domain interactions. BMC
    Bioinformatics, 7:269.
    DS_530                         apmm1
    Wang et al. (2007). Analysis on
    multi-domain cooperation for predicting
    protein-protein interactions. BMC
    Bioinformactics, 8(1):391
    DS_531                         apmm2
    Wang et al. (2007). Analysis on
    multi-domain cooperation for predicting
    protein-protein interactions. BMC
    Bioinformactics, 8(1):391
    DS_532                         llz
    Liu et al. (2005). Inferring
    protein-protein interactions through
    high-throughput interaction data from
    diverse organisms. Bioinformatics,
    21(15):3279–3285.
    DS_533                         dima-dpea
    Pagel et al. (2008). DIMA 2.0–predicted
    and known domain interactions. Nucleic
    Acids Res, 36, D651–D655.
    DS_534                         dima-string
    Pagel et al. (2008). DIMA 2.0–predicted
    and known domain interactions. Nucleic
    Acids Res, 36, D651–D655.
    DS_535                         dima-dprof
    Pagel et al. (2008). DIMA 2.0–predicted
    and known domain interactions. Nucleic
    Acids Res, 36, D651–D655.
    DS_536                         dpea
    Riley et al. (2005). Inferring protein
    domain interactions from databases of
    interacting proteins. Genome Biol,
    6(10):R89.
    DS_537                         lp
    Guimaraes. et al. (2006). Predicting
    domain-domain interactions using a
    parsimony approach. Genome Biol, 7(11):R104.
    DS_538                         RDFF
    Chen et al. (2005). Prediction of
    protein-protein interactions using
    random decision forest framework.
    Bioinformatics, 21(24):4394-400.
    DS_539                         rcdp50
    Jothi et al. (2006). Co-evolutionary
    analysis of domains in interacting
    proteins reveals insights into
    domain-domain interactions mediating
    protein-protein interactions. J Mol
    Biol, 362(4):861-75.
    DS_540                         tw
    Wuchty et al. (2006). Topology and
    weights in a protein domain interaction
    network-a novel way to predict protein
    interactions. BMC Genomcis, 7:122.
    DS_541                         FunSimMat 2.1
    Schlicker and Albrecht. (2008).
    FunSimMat: a comprehensive functional
    similarity database. Nucleic Acids Res,
    36, D434–D439.
    DS_542                         Domain support
    Protein interactions that are supported
    by underlying domain interactions as
    reported in iPfam.
    DS_544                         merops
    merops
    DS_546                         UCSC Gencode
    UCSC Gencode related tracks
    DS_548                         novelloci
    327 novel gene fragments provided by Mark Diekhans
    DS_549                         Gene Expression Atlas
    European Bioinformatics Institute
    (EMBL-EBI) Gene
    Expression Atlas. The Gene Expression
    Atlas is a
    semantically enriched database of
    meta-analysis
    based summary statistics over a curated
    subset of
    ArrayExpress Archive, servicing queries for
    condition-specific gene expression
    patterns as well
    as broader exploratory searches for
    biologically
    interesting genes/samples.
    DS_550                         otter manual annotations
    A DAS source that provides access to the manual annotation data inside the Otter database in NCBI36 coordinates.
    DS_553                         translated otter manual annotations
    A DAS source that provides the translations of the manual annotation data inside the Otter database.
    DS_557                         ASTD human exons
    ASTD exon features grouped into transcripts, offered on human chromosome co-ordinates.
    DS_558                         ASTD mouse exons
    ASTD exon features grouped into transcripts, offered on mouse chromosome co-ordinates.
    DS_559                         ASTD rat exons
    ASTD exon features grouped into transcripts, offered on rat chromosome co-ordinates.
    DS_560                         ASTD human SNPs
    ASTD SNP features, offered on human chromosome co-ordinates.
    DS_561                         ASTD mouse SNPs
    ASTD SNP features, offered on mouse chromosome co-ordinates.
    DS_562                         ASTD rat SNPs
    ASTD SNP features, offered on rat chromosome co-ordinates.
    DS_564                         PInS
    Bordner and Gorin (2008). Comprehensive
    inventory of protein complexes in the
    Protein Data Bank from consistent
    classification of interfaces. BMC
    Bioinformatics, 9:234.
    DS_566                         GRC region human genome NCBI36
    Region reported to the Genome Reference Consortium NCBI36
    DS_567                         Human miRNAs
    A DAS source that provides access to the annotation data of primary transcripts of human miRNAs
    DS_568                         Mouse miRNAs
    A DAS source that provides access to the annotation data of primary transcripts of mouse miRNAs
    DS_569                         Rat miRNAs
    A DAS source that provides access to the annotation data of primary transcripts of rat miRNAs
    DS_570                         hydra_ptg_p53_p19_M37
    hydra_ptg_p53_p19_M37 mutations
    DS_571                         CONGO
    de novo protein-coding exon predictions
    based on evolutionary signatures in 18
    mammalian genomes (preliminary data, not
    for use in production pipelines)
    DS_572                         JAX Mouse Data
    Mouse Genome Informatics data
    DS_579                         Consensus Pseudogenes
    Pseudogenes where both Yales PseudoPipe and
    UCSCs RetroFinder algorithms agree.
    DS_580                         otter manual annotations transcript sequences
    A DAS source that provides the transcript sequences of the manual annotation data from the Otter database.
    DS_581                         SWISS-MODEL Repository
    SWISS-MODEL Repository
    DS_582                         GNF Tissue Atlas
    Rat Tissue Expression data from the Genomics Institute of the Novartis Research Foundation.
    DS_583                         GAD
    Genetic Association Database (diseases)
    DS_585                         eQTL Sanger
    Expression Quantitative Trait Loci from the Sanger Institute
    DS_586                         MeDIP-chip B-cells
    DNA methylation landscape for B-cells, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_587                         MeDIP-chip CD4 T-cells
    DNA methylation landscape for CD4 T-cells, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_588                         MeDIP-chip CD8 T-cells
    DNA methylation landscape for CD8 T-cells, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_589                         MeDIP-chip Cervix
    DNA methylation landscape for Cervix, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_590                         MeDIP-chip Colon
    DNA methylation landscape for Colon, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_591                         MeDIP-chip GM06990
    DNA methylation landscape for GM06990, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_592                         MeDIP-chip Liver
    DNA methylation landscape for Liver, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_593                         MeDIP-chip Lung
    DNA methylation landscape for Lung, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_594                         MeDIP-chip Pancreas
    DNA methylation landscape for Pancreas, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_595                         MeDIP-chip Placenta
    DNA methylation landscape for Placenta, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_596                         MeDIP-chip Prostate
    DNA methylation landscape for Prostate, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_597                         MeDIP-chip Rectum
    DNA methylation landscape for Rectum, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_598                         MeDIP-chip Skeletal Muscle
    DNA methylation landscape for Skeletal Muscle, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_599                         MeDIP-chip Sperm
    DNA methylation landscape for Sperm, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_600                         MeDIP-chip Uterus
    DNA methylation landscape for Uterus, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_601                         MeDIP-chip Whole Blood
    DNA methylation landscape for Whole Blood, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_634                         BM_hydrophobicity
    A hydrophobicity plot using the
    Black-Mould algorithm (Black, S.D. and
    Mould, D.R. 1991. Anal. Biochem. 193, 72-82)
    DS_635                         KD_hydrophobicity
    A hydrophobicity plot using the
    Kyte-Doolittle algorithm (Kyte, J,
    Doolittle, RF. 1982. J Mol Biol
    157:105-132).
    DS_667                         hs36_clone
    Cloneset information from a NCBI36 assembly based Ensembl
    DS_668                         8k_dkfz
    BAC array provided from Bernhard Radlwimmer and Peter Lichter from the DKFZ, Heidelberg, Germany (Anna Obenauf ticket 28160)
    DS_669                         affy100k
    Affymetrix 100k (NCBI36)
    DS_670                         affy10k
    Affymetrix 10k (NCBI36)
    DS_671                         affy250_nsp
    affy250_nsp
    DS_672                         affy500k
    Affymetrix 500k (NCBI36)
    DS_674                         agilent_105a
    Agilent Human Genome CGH Microarray 105A (NCBI36)
    DS_675                         agilent_human244
    agilent_human244
    DS_676                         agilent_human44B
    agilent_human44B
    DS_678                         agilent_human44A
    agilent_human44A
    DS_679                         agilent_human185
    agilent_human185
    DS_683                         BG_cytochip_v1_1
    Bluegnome
    DS_684                         BG_cytochip_v2_0
    Bluegnome Provided by BlueGnome contact, David Chrimes - ticket 45502 Thu Sep 27 2007
    DS_686                         Eichler_36
    Eichler cloneset( Oxford sent by Regina Regan (15/05/07)) mapped to NCBI 36
    DS_692                         ngrl_agilent
    Oligo array based on the Agilent 44b cloneset specific to the Wessex group (from Shuwen.Huang@salisbury)
    DS_693                         nimblegen_hg18_wg
    Nimblegen Whole Genome (NCBI36)
    DS_694                         spectral36
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_697                         ens_36_30k
    WTSI TPA (NCBI36 based on file:HuTP_IMF_NCBI36_02Feb07.cfg )
    DS_698                         ens_36_omimg
    OMIM morbidmap data mapped to NCBI36 assembly locations
    DS_699                         ens_36_omim_genes
    OMIM genes mapped to NCBI 36
    DS_700                         hgnc36
    HGNC mappings Mapping data from http://www.gene.ucl.ac.uk/cgi-bin/nomenclature/gdlw.plHGNC  HUGO
    DS_703                         WGTP_regions_36
    WGTP regions (redon et al) mapped to NCBI 36
    DS_704                         Cosmic_Protein_Mutation
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_708                         Integr8 mRNA
    The Integr8 mRNA data source describes
    the coverage of protein sequences from
    the non-redundant sets available through
    Integr8 for each complete proteome by
    experimentally determined mRNA sequence.
    DS_709                         Rfam
    Rfam
    DS_710                         Community Annotation
    Annotations for regions in the zebrafish assembly Zv8 as reported by the community
    DS_717                         CytoChip v3
    CytoChip version 3 is a BAC based microarray designed for the investigation of genomic copy number imbalance associated with constitutional cytogenetic disorders. Please contact info@cambridgebluegnome.com for further information or with any questions.
    DS_719                         NIDB Rat CNVs
    Rat Copy Number Variations, supplied by the Netherlands Institute for Developmental Biology.
    DS_721                         MeDIP-seq Sperm
    DNA methylation landscape for Sperm, assayed using methyl DNA immunoprecipitation (MeDIP), Illumina Genome Analyzer sequencing and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.
    DS_722                         EMMA
    European Mouse Mutant Archive (EMMA)
    DS_723                         CHORI29 clones
    CHORI-29 NOD BAC Library, mapped to the NCBIM37 mouse assembly. The NOD/ShiLtJ mouse BAC library end-sequences have been mapped to the NCBIM37 mouse assembly using SSAHA alignment of the reads.
    DS_724                         DIL NOD clones
    DIL NOD BAC Library, mapped to the NCBIM37 mouse assembly. The NOD/MrkTac mouse BAC library end-sequences have been mapped to the NCBIM37 mouse assembly using SSAHA alignment of the reads.
    DS_761                         Ancora: Human-Zebrafish HCNEs
    Human non-exonic genomic regions
    conserved in the zebrafish (Danio rerio)
    genome. Minimum 70% identity over 50
    alignment columns. More sources are
    available at http://ancora.genereg.net/das
    DS_763                         VectorBase Expression
    Simple summaries of microarray-based
    gene expression from VectorBase
    DS_764                         Exome Full Set
    Full coverage exome coordinates set
    DS_765                         ens_m37_129AB22
    129S7/AB2.2 Clones
    DS_766                         GO literature
    Gene Ontology (GO) annotations to
    proteins in the UniProt Knowledgebase
    (UniProtKB) generated from literature
    DS_767                         disease literature
    Associated diseases for proteins in
    the UniProt Knowledgebase (UniProtKB)
    generated from literature
    DS_769                         Bgee
    Bgee is a database to retrieve and
    compare gene expression patterns between
    animal species.
    DS_770                         Prosite Full Alignments
    Retrieve the full sequence alignments
    for a PROSITE entry
    DS_771                         EMAGE
    Mouse Embryo Spatial-Temporal In-Situ
    Gene Expression Resource
    DS_772                         Vega genes
    Mapping of Vega genes to Ensembl
    DS_773                         Vega genes
    Mapping of Vega genes to Ensembl
    DS_774                         GRC region for Mouse assembly NCBIM_37
    Region reported to the Genome Reference Consortium
    DS_775                         GRC region NCBI_37
    Region reported to the Genome Reference Consortium GRCh37
    DS_817                         Prosite Features (matches)
    The Prosite Feature DAS service provides
    features (Prosite matches, including
    level -1 not shown in UniProtKB. n.b.
    prosite rule derived sub-features are
    not shown. n.b. to get all features of a
    UniProtKB entry use the UniProtKB DAS
    service), sequence and type capabilities.
    DS_818                         Zv_8 ZF-MODELS CLGY_Enhancer_Detection
    A DAS source that provides the insertions from the ZF-MODELS enhancer detection mutagenesis mapped to Zv_8
    DS_819                         Gorilla_gorilla.VEGA-clone.transcript
    Annotation source (returns clones) for Gorilla_gorilla transcript
    DS_820                         Gorilla_gorilla.VEGA-clone.translation
    Annotation source (returns clones) for Gorilla_gorilla translation
    DS_821                         Macropus_eugenii.VEGA-clone.transcript
    Annotation source (returns clones) for Macropus_eugenii transcript
    DS_822                         Macropus_eugenii.VEGA-clone.translation
    Annotation source (returns clones) for Macropus_eugenii translation
    DS_823                         IntOGen
    IntOGen is a resource that integrates
    multidimensional OncoGenomics Data for
    the identification of genes involved in
    development of different cancer types.
    DS_824                         Ensembl genes
    Mapping of Ensembl genes to Vega
    DS_825                         MGP_129P2_SNPs
    Mouse Genomes Project coding SNPs for strain 129P2; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_826                         MGP_129S1_SvImJ_SNPs
    Mouse Genomes Project coding SNPs for strain 129S1/SvImJ; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_827                         MGP_A_J_SNPs
    Mouse Genomes Project coding SNPs for strain A/J; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_828                         MGP_AKR_J_SNPs
    Mouse Genomes Project coding SNPs for strain AKR/J; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_829                         MGP_BALB_cJ_SNPs
    Mouse Genomes Project coding SNPs for strain BALB/cJ; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_830                         MGP_C3H_HeJ_SNPs
    Mouse Genomes Project coding SNPs for strain C3H/HeJ; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_831                         MGP_C57BL_6NJ_SNPs
    Mouse Genomes Project coding SNPs for strain C57BL/6NJ; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_832                         MGP_CAST_EiJ_SNPs
    Mouse Genomes Project coding SNPs for strain CAST/EiJ; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_833                         MGP_CBA_J_SNPs
    Mouse Genomes Project coding SNPs for strain CBA/J; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_834                         MGP_DBA_2J_SNPs
    Mouse Genomes Project coding SNPs for strain DBA/2J; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_835                         MGP_LP_J_SNPs
    Mouse Genomes Project coding SNPs for strain LP/J; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_836                         MGP_NOD_ShiLtJ_SNPs
    Mouse Genomes Project coding SNPs for strain NOD/ShiLtJ; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_837                         MGP_NZO_HiLtJ_SNPs
    Mouse Genomes Project coding SNPs for strain NZO/HiLtJ; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_838                         MGP_PWK_PhJ_SNPs
    Mouse Genomes Project coding SNPs for strain PWK/PhJ; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_839                         MGP_Spretus_EiJ_SNPs
    Mouse Genomes Project coding SNPs for strain Spretus/EiJ; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_840                         MGP_WSB_EiJ_SNPs
    Mouse Genomes Project coding SNPs for strain WSB/EiJ; non-synonymous SNPs are in yellow, synonymous are in green.
    DS_857                         RNASeq An. gambiae (Gibbons et al.)
    This DAS source is the result of the
    alignments of Solexa reads from a
    next-generation sequencing study of the
    transcriptome by Gibbons and colleagues
    (doi:10.1093/molbev/msp188) focusing on
    Anopheles and Aedes. This DAS source
    returns the density of aligned reads per
    base.
    DS_858                         RNASeq Ae. aegypti (Gibbons et al.)
    This DAS source is the result of the
    alignments of Solexa reads from a
    next-generation sequencing study of the
    transcriptome by Gibbons and colleagues
    (doi:10.1093/molbev/msp188) focusing on
    Anopheles and Aedes. This DAS source
    returns the density of aligned reads per
    base.
    DS_859                         FireDB
    Functionally important residues from
    proteins with known structure
    DS_860                         pdbchainfeatures
    Provides various third party annotations that have been computed for PDB chains.
    DS_861                         pdb_uniprot_mapping
    Provides a DAS source that is serving the alignment between UniProtKB and PDB, derived from the SIFTS mappings.
    DS_863                         go_hsa/bioinfo.cipf
    null
    DS_864                         SNPedia
    DAS source mirroring data from SNPedia. SNPedia is a wiki investigating human genetics. We share information about the effects of variations in DNA, citing peer-reviewed scientific publications. It is used by Promethease to analyze and help explain your DNA.
    DS_865                         Cosmic Mutations in COLO-829
    All genomic mutations in cellline COLO-829 from Cosmic
    DS_866                         cbs_sort
    The combined result af the signalp,
    secretomep, targetp, netnes & lipop
    server for the given id
    DS_867                         cbs_total
    The combined result of all of CBS DAS
    servers on the requested id
    DS_868                         netacet
    NetAcet 1.0 server predicts substrates
    of N-acetyltransferase A (NatA) on yeast.
    DS_869                         netnglyc
    The NetNglyc server predicts
    N-Glycosylation sites in human protein
    DS_870                         netoglyc
    The NetOglyc server produces neural
    network predictions of mucin type GalNAc
    O-glycosylation sites in mammalian proteins
    DS_871                         targetp
    TargetP predicts the subcellular
    location of eukaryotic proteins
    DS_872                         tmhmm
    Prediction of transmembrane helices in
    proteins
    DS_873                         ens_m37_bacmap
    BAC Clones (RP23/24 libraries) DAS Source For M37 C57BL/6J Mouse Assembly:  End read sequences have been mapped to the M37 Mouse assembly using SSAHA. Clones positioned by appropriate read end pairs are indictated by black rectangles.  Fingerprinting maps allow the positioning of extra clones (using map2gp). These are indicated by gold rectangles with black outlines. These may be associated (depicted with horizontal line) with single SSAHA mapped read ends (which are depicted as narrower black rectangles).
    DS_876                         Test 1.6 sources
    Test for DAS 1.6 sources
    DS_877                         Cosmic Mutations in NCI-H209
    All genomic mutations in cellline NCI-H209 from Cosmic
    DS_918                         Gasterosteus aculeatus 59_1l (all transcripts)
    SUPERFAMILY domain annotation for Gasterosteus aculeatus 59_1l (all transcripts).
    DS_919                         Gallus gallus 59_2o (all transcripts)
    SUPERFAMILY domain annotation for Gallus gallus 59_2o (all transcripts).
    DS_920                         Macaca mulatta 59_10n (all transcripts)
    SUPERFAMILY domain annotation for Macaca mulatta 59_10n (all transcripts).
    DS_921                         Pongo pygmaeus 59_1e (all transcripts)
    SUPERFAMILY domain annotation for Pongo pygmaeus 59_1e (all transcripts).
    DS_922                         Loxodonta africana 59_3b (all transcripts)
    SUPERFAMILY domain annotation for Loxodonta africana 59_3b (all transcripts).
    DS_923                         Dasypus novemcinctus 59_2c (all transcripts)
    SUPERFAMILY domain annotation for Dasypus novemcinctus 59_2c (all transcripts).
    DS_924                         Tursiops truncatus 59_1e (all transcripts)
    SUPERFAMILY domain annotation for Tursiops truncatus 59_1e (all transcripts).
    DS_925                         Sus scrofa 59_9c (all transcripts)
    SUPERFAMILY domain annotation for Sus scrofa 59_9c (all transcripts).
    DS_926                         Ornithorhynchus anatinus 59_1m (all transcripts)
    SUPERFAMILY domain annotation for Ornithorhynchus anatinus 59_1m (all transcripts).
    DS_927                         Monodelphis domestica 59_5k (all transcripts)
    SUPERFAMILY domain annotation for Monodelphis domestica 59_5k (all transcripts).
    DS_928                         Aedes aegypti 55 (all transcripts)
    SUPERFAMILY domain annotation for Aedes aegypti 55 (all transcripts).
    DS_929                         Ochotona princeps 59_1e (all transcripts)
    SUPERFAMILY domain annotation for Ochotona princeps 59_1e (all transcripts).
    DS_930                         Drosophila melanogaster 59_525a (all transcripts)
    SUPERFAMILY domain annotation for Drosophila melanogaster 59_525a (all transcripts).
    DS_931                         Echinops telfairi 59_1i (all transcripts)
    SUPERFAMILY domain annotation for Echinops telfairi 59_1i (all transcripts).
    DS_932                         Erinaceus europaeus 59_1g (all transcripts)
    SUPERFAMILY domain annotation for Erinaceus europaeus 59_1g (all transcripts).
    DS_933                         Tetraodon nigroviridis 59_8d (all transcripts)
    SUPERFAMILY domain annotation for Tetraodon nigroviridis 59_8d (all transcripts).
    DS_934                         Myotis lucifugus 59_1i (all transcripts)
    SUPERFAMILY domain annotation for Myotis lucifugus 59_1i (all transcripts).
    DS_935                         Tupaia belangeri 59_1h (all transcripts)
    SUPERFAMILY domain annotation for Tupaia belangeri 59_1h (all transcripts).
    DS_936                         Dipodomys ordii 59_1e (all transcripts)
    SUPERFAMILY domain annotation for Dipodomys ordii 59_1e (all transcripts).
    DS_937                         Tarsius syrichta 59_1e (all transcripts)
    SUPERFAMILY domain annotation for Tarsius syrichta 59_1e (all transcripts).
    DS_938                         Equus caballus 59_2f (all transcripts)
    SUPERFAMILY domain annotation for Equus caballus 59_2f (all transcripts).
    DS_939                         Felis catus 59_1h (all transcripts)
    SUPERFAMILY domain annotation for Felis catus 59_1h (all transcripts).
    DS_940                         Gorilla gorilla 59_3b (all transcripts)
    SUPERFAMILY domain annotation for Gorilla gorilla 59_3b (all transcripts).
    DS_941                         Anopheles gambiae 49_3j (all transcripts)
    SUPERFAMILY domain annotation for Anopheles gambiae 49_3j (all transcripts).
    DS_942                         Pteropus vampyrus 59_1e (all transcripts)
    SUPERFAMILY domain annotation for Pteropus vampyrus 59_1e (all transcripts).
    DS_943                         Saccharomyces cerevisiae 59_2a (all transcripts)
    SUPERFAMILY domain annotation for Saccharomyces cerevisiae 59_2a (all transcripts).
    DS_944                         Microcebus murinus 59_1d (all transcripts)
    SUPERFAMILY domain annotation for Microcebus murinus 59_1d (all transcripts).
    DS_945                         Mus musculus 59 (all transcripts)
    SUPERFAMILY domain annotation for Mus musculus 59 (all transcripts).
    DS_946                         Procavia capensis 59_1e (all transcripts)
    SUPERFAMILY domain annotation for Procavia capensis 59_1e (all transcripts).
    DS_947                         Oryctolagus cuniculus 59_2b (all transcripts)
    SUPERFAMILY domain annotation for Oryctolagus cuniculus 59_2b (all transcripts).
    DS_948                         Oryzias latipes 59_1k (all transcripts)
    SUPERFAMILY domain annotation for Oryzias latipes 59_1k (all transcripts).
    DS_949                         Rattus norvegicus 59_34a (all transcripts)
    SUPERFAMILY domain annotation for Rattus norvegicus 59_34a (all transcripts).
    DS_950                         Otolemur garnettii 59_1g (all transcripts)
    SUPERFAMILY domain annotation for Otolemur garnettii 59_1g (all transcripts).
    DS_951                         Ciona intestinalis 59_2o (all transcripts)
    SUPERFAMILY domain annotation for Ciona intestinalis 59_2o (all transcripts).
    DS_952                         Bos taurus 59_4h (all transcripts)
    SUPERFAMILY domain annotation for Bos taurus 59_4h (all transcripts).
    DS_953                         Macropus eugenii 59_1b (all transcripts)
    SUPERFAMILY domain annotation for Macropus eugenii 59_1b (all transcripts).
    DS_954                         Sorex araneus 59_1g (all transcripts)
    SUPERFAMILY domain annotation for Sorex araneus 59_1g (all transcripts).
    DS_955                         Pan troglodytes 59_21n (all transcripts)
    SUPERFAMILY domain annotation for Pan troglodytes 59_21n (all transcripts).
    DS_956                         Danio rerio 59_8e (all transcripts)
    SUPERFAMILY domain annotation for Danio rerio 59_8e (all transcripts).
    DS_957                         Ciona savignyi 59_2j (all transcripts)
    SUPERFAMILY domain annotation for Ciona savignyi 59_2j (all transcripts).
    DS_958                         Spermophilus tridecemlineatus 59_1i (all transcrip
    SUPERFAMILY domain annotation for Spermophilus tridecemlineatus 59_1i (all transcripts).
    DS_960                         Callithrix jacchus 59_321a (all transcripts)
    SUPERFAMILY domain annotation for Callithrix jacchus 59_321a (all transcripts).
    DS_961                         Cavia porcellus 59_3c (all transcripts)
    SUPERFAMILY domain annotation for Cavia porcellus 59_3c (all transcripts).
    DS_962                         Canis familiaris 59_2o (all transcripts)
    SUPERFAMILY domain annotation for Canis familiaris 59_2o (all transcripts).
    DS_963                         Caenorhabditis elegans 59_210a (all transcripts)
    SUPERFAMILY domain annotation for Caenorhabditis elegans 59_210a (all transcripts).
    DS_964                         Vicugna pacos 59_1e (all transcripts)
    SUPERFAMILY domain annotation for Vicugna pacos 59_1e (all transcripts).
    DS_965                         Xenopus tropicalis 59_41p (all transcripts)
    SUPERFAMILY domain annotation for Xenopus tropicalis 59_41p (all transcripts).
    DS_966                         Homo sapiens 59_37d (all transcripts)
    SUPERFAMILY domain annotation for Homo sapiens 59_37d (all transcripts).
    DS_967                         Anolis carolinensis 59_1c (all transcripts)
    SUPERFAMILY domain annotation for Anolis carolinensis 59_1c (all transcripts).
    DS_1028                        InterPro-Matches-Overview
    Shows the maximum extent of the matches
    from all signatures that are integrated
    into a single InterPro entry against
    UniProtKB protein sequences (i.e. if an
    InterPro entry contains 2 signatures, A
    and B, and both of these match a
    protein, A between residue 3 and 125 and
    B between residue 5 and 127, the
    overview supermatch of these
    signatures is between 3 and 127).
    DS_1029                        InterPro-UniParc-matches
    Contains all InterPro member database
    signature matches to all UniParc protein
    sequences.
    DS_1254                        PeptideAtlas Mouse
    Information exported from PeptideAtlas
    Mouse build.
    DS_1255                        PeptideAtlas Human
    Information exported from PeptideAtlas
    Human build.
    DS_1256                        PeptideAtlas Drosophila
    Peptides information exported from
    PeptideAtlas Drosophila build.
    DS_1257                        PeptideAtlas Yeast
    Peptides from the PeptideAtlas Yeast
    build
    DS_1258                        PeptideAtlas Yeast MRM
    Peptides from the PeptideAtlas Yeast
    MRM PeptideAtlas build
    DS_1259                        PeptideAtlas Human Plasma
    Peptides from the PeptideAtlas Human
    Plasma build
    DS_1260                        PeptideAtlas Human Urine
    Peptides from the PeptideAtlas Human
    Urine build
    DS_1261                        PeptideAtlas Mouse Plasma
    Peptides from the PeptideAtlas Mouse
    Plasma build
    DS_1262                        Meleagris gallopavo 57_2 (all transcripts)
    SUPERFAMILY domain annotation for Meleagris gallopavo 57_2 (all transcripts).
    DS_1263                        Taeniopygia guttata 59_1e (all transcripts)
    SUPERFAMILY domain annotation for Taeniopygia guttata 59_1e (all transcripts).
    DS_1289                        PhenCode
    PhenCode connects human phenotype and
    clinical data in various locus-specific
    mutation databases (LSDBs) with data on
    genome sequences, evolutionary history,
    and function in genome browsers.
    DS_1290                        ArkDB Chick Markers
    ePCR mapping of Chicken Markers found at
    www.thearkdb.org.uk on to the WASHUC_2
    assembly
    DS_1291                        ArkBD Pig Markers
    ePCR mappings of pig markers found at
    www.thearkdb.org.uk on to the Sscrofa9
    Pig genome assembly
    DS_1292                        ArkDB Cow Markers
    ePCR mappings of cow markers found at
    www.thearkdb.org.uk on to the cow
    btau4.0 genome assembly
    DS_1293                        ArkDB Turkey Markers
    ePCR mappings of turkey markers found at
    www.thearkdb.org.uk on to the turkey
    UMD2 genome assembly
    DS_1294                        Anopheles albimanus mRNAseq Martinez-Barnetche
    Jesus Martinez-Barnetche and colleagues
    (insert ref here) sequenced the
    transcriptome of the Anopheles albimanus
    adult female, an important malaria
    vector in Latin America. By combining
    Sanger, 454 and Illumina sequences from
    cDNA libraries derived from the midgut,
    cuticular fat body, dorsal vessel,
    salivary gland and from whole adult
    females, we generated a single,
    high-quality assembly containing 16,669
    transcripts, 92% of which mapped to the
    An. darlingi genome. More than half of
    the transcripts had a match to proteins
    in other insect vectors and had an
    InterPro annotation.
    DS_1295                        Mass spec. proteomics (JHU II)
    We carried out a comprehensive mass
    spectrometry analysis of midgut,
    salivary gland and ovary of adult female
    mosquito using LTQ Orbitrap XL ETD high
    resolution mass spectrometer. We
    analyzed the mass spectrometry derived
    data in Mascot search algorithm using
    six frame translation of genome and
    protein database of Anopheles, Aedes and
    Drosophila. We identified novel genes,
    corrected and validated gene annotations
    of Anopheles gambiae.
    DS_1296                        "NextGen" Expression
    Interim handling of
    DS_1306                        Canis_familiaris.VEGA.prediction_transcript
    Annotation source for Canis_familiaris prediction_transcript
    DS_1307                        Canis_familiaris.VEGA.reference
    Canis_familiaris Reference server based on VEGA assembly. Contains 1 top level entries.
    DS_1308                        Canis_familiaris.VEGA.transcript
    Annotation source for Canis_familiaris transcript
    DS_1309                        Canis_familiaris.VEGA.translation
    Annotation source for Canis_familiaris translation
    DS_1317                        Gorilla_gorilla.VEGA.prediction_transcript
    Annotation source for Gorilla_gorilla prediction_transcript
    DS_1318                        Gorilla_gorilla.VEGA.reference
    Gorilla_gorilla Reference server based on VEGA assembly. Contains 2 top level entries.
    DS_1319                        Gorilla_gorilla.VEGA.transcript
    Annotation source for Gorilla_gorilla transcript
    DS_1320                        Gorilla_gorilla.VEGA.translation
    Annotation source for Gorilla_gorilla translation
    DS_1328                        Macropus_eugenii.VEGA.prediction_transcript
    Annotation source for Macropus_eugenii prediction_transcript
    DS_1329                        Macropus_eugenii.VEGA.reference
    Macropus_eugenii Reference server based on VEGA assembly. Contains 1 top level entries.
    DS_1330                        Macropus_eugenii.VEGA.transcript
    Annotation source for Macropus_eugenii transcript
    DS_1331                        Macropus_eugenii.VEGA.translation
    Annotation source for Macropus_eugenii translation
    DS_1339                        Sus_scrofa.VEGA.karyotype
    Annotation source for Sus_scrofa karyotype
    DS_1340                        Sus_scrofa.VEGA.prediction_transcript
    Annotation source for Sus_scrofa prediction_transcript
    DS_1341                        Sus_scrofa.VEGA.reference
    Sus_scrofa Reference server based on VEGA assembly. Contains 3 top level entries.
    DS_1342                        Sus_scrofa.VEGA.transcript
    Annotation source for Sus_scrofa transcript
    DS_1343                        Sus_scrofa.VEGA.translation
    Annotation source for Sus_scrofa translation
    DS_1397                        hg19
    Human Feb. 2009 (GRCh37/hg19) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1398                        hg18
    Human Mar. 2006 (NCBI36/hg18) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1399                        hg17
    Human May 2004 (NCBI35/hg17) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1400                        hg16
    Human July 2003 (NCBI34/hg16) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1401                        mm9
    Mouse July 2007 (NCBI37/mm9) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1402                        mm8
    Mouse Feb. 2006 (NCBI36/mm8) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1403                        mm7
    Mouse Aug. 2005 (NCBI35/mm7) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1404                        cavPor3
    Guinea pig Feb. 2008 (Broad/cavPor3) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1405                        equCab2
    Horse Sep. 2007 (Broad/equCab2) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1406                        susScr2
    Pig Nov. 2009 (SGSC Sscrofa9.2/susScr2) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1407                        loxAfr3
    Elephant Jul. 2009 (Broad/loxAfr3) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1408                        anoCar1
    Lizard Feb. 2007 (Broad/anoCar1) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1409                        oryLat2
    Medaka Oct. 2005 (NIG/UT MEDAKA1/oryLat2) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1410                        dm3
    D. melanogaster Apr. 2006 (BDGP R5/dm3) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1411                        dm2
    D. melanogaster Apr. 2004 (BDGP R4/dm2) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1412                        dm1
    D. melanogaster Jan. 2003 (BDGP R3/dm1) Genome at UCSC Note: this source should be used with a type filter on the end of a features request e.g. &type=bacEndPairs&type=ensGene
    DS_1413                        60k_SNP
    60K SNPs project. SNPs mapped with
    flanking sequence onto the Pig genome
    ver 9. Only unique mapping are
    displayed.
    DS_1415                        cnio_massspec
    Human mass-spec peptides mapped to Gencode 3c by M.Tress et al., CNIO
    DS_1416                        Cosmic Transcripts
    Transcripts from Cosmic mapped to Human GRCh 37
    DS_1417                        Cosmic Mutations
    Mutations from Cosmic mapped to Human GRCh 37
    DS_1418                        Cosmic Mutations in COLO-829
    All genomic mutations in cellline COLO-829 from Cosmic
    DS_1419                        Cosmic Mutations in NCI-H209
    All genomic mutations in cellline NCI-H209 from Cosmic
    DS_1420                        uniprot2probes
    Annotation source with microarray probes
    mapping uniprot sequences.
    DS_1436                        Pride DAS 1.6
    The PRIDE database is a centralized,
    public data repository for proteomics
    data. It has been developed to provide
    the proteomics community with a public
    repository for protein and peptide
    identifications together with the
    evidence supporting these
    identifications. In addition to
    identifications, PRIDE is able to
    capture details of post-translational
    modifications coordinated relative to
    the peptides in which they have been
    found.
    DS_1523                        hsa_54_36p
    Human genome annotation from Ensembl 54 (via
    biojava-ensembl)
    DS_1524                        hsa_59_37d
    Human genome annotation from Ensembl 59
    via biojava-ensembl (gene structures are
    GENCODE 4)
    DS_1525                        medipseq_reads
    MeDIP-seq read mappings from Nature Biotech.
    26:779-785
    DS_1526                        uniprot_exon_snp
    Ensembl exon boundary and SNP data  projected on UniProt sequence. Based on  the COMPARA ENSP-UniProt mapping.
    DS_1527                        demo_histo
    shows score from signal peptide prediction
    DS_1528                        demo_gradient
    shows score from signal peptide prediction
    DS_1529                        demo_lineplot
    shows score from signal peptide prediction
    DS_1530                        demo_nostyle
    shows score from signal peptide prediction
    DS_1531                        yale_pseudogenes
    pseudogenes coming from Philip at Yale.
    DS_1532                        DECIPHER_HGNC
    HGNC mappings Mapping data from http://www.gene.ucl.ac.uk/cgi-bin/nomenclature/gdlw.pl HGNC  HUGO
    DS_1533                        Human CCDS Public Note
    CCDS Public Note
    DS_1534                        Mouse CCDS Public Note
    CCDS Public Note
    DS_1535                        decipher
    DECIPHER V5.1
    DS_1536                        segdup_washu_36_collapsed
    segdup_washu_36_collapsed
    DS_1537                        desmith
    DeSmith(http://projects.tcag.ca/variation/downloads/deSmith2007.txt)
    DS_1540                        agilent_4x44
    agilent_4x44
    DS_1542                        WGTP_loci_36
    WGTP regions (redon et al) mapped to NCBI 36
    DS_1544                        ens5236ngenes
    ens5236ngenes
    DS_1552                        x_chromosome_tiling_array
    X-chromosome Tiling array (Leuven: 22/10/07)
    DS_1553                        xhd
    xhd
    DS_1554                        xes
    xes
    DS_1555                        s+vt
    s+vt
    DS_1556                        sanger244kv2
    sanger244kv2
    DS_1557                        toronto_poly_36
    Database of Genetic Variations DAS Source For NCBI36 Human Assembly (hg18): The Database of Genomic Variants is a curated catalogue of large-scale variation in the human genome.The data displayed was obtained from their download site (which was last updated here on 31st July 2008). There are 59 Inversion, 6481 CopyNumber and 18 InversionBreakpoint features.
    DS_1558                        iPfamInteraction
    iPfamLigInteraction das source offers the ligands interactions with the pfam domain.
    DS_1559                        ens_36_segdup_washu
    ens_36_segdup_washu
    DS_1560                        KO_designs
    Recombineering oligos for knockout designs (Sanger HTGT).
    DS_1561                        KO_designs_cr
    Candidate regions for knockout designs (Sanger HTGT).
    DS_1562                        custom_KO_designs
    Recombineering oligos for custom knockout designs (Sanger HTGT).
    DS_1563                        KO_vectors
    Recombineering oligos for constructed knockout designs (Sanger HTGT).
    DS_1564                        mouse_KOs
    Orthologous_mouse_KOs
    DS_1565                        ikmc_products
    IKMC - Knockout Mutant Mouse Alleles
    DS_1566                        team87_production_constructs
    Recombineering oligos for knockout designs (Sanger HTGT).
    DS_1572                        ens_zfish7_morpholino
    ens_zfish7_morpholino
    DS_1573                        Havana manual annotation (GRCh37)
    A DAS source that provides access to the manual annotation data inside the Otter database in GRCh37 coordinates.
    DS_1574                        Havana Pig manual annotations
    A DAS source that provides access to the manual annotation data inside the Otter database for Pig.
    DS_1575                        ChromatinSigs
    TSS predictions based on combined chromatin signatures (Jason Ernst, MIT)
    DS_1576                        CCDS human
    Human transcripts part of the CCDS set
    DS_1577                        CCDS mouse
    Murine transcripts part of the CCDS set
    DS_1578                        ASPIC
    ASPIC alternative isoforms on NCBI 36
    DS_1579                        important GENCODE issues
    Loci and transcripts flagged in the AnnoTrack system for the attention of annotators
    DS_1580                        peptides confirmed by mass spectrometrometry
    A DAS source that provides access to the automatic annotation data from mass spectrometry (translational evidence)
    DS_1584                        KO_mouse_genes
    Knockout mouse genes
    DS_1585                        homo_sapiens_KO_mouse_orthologues
    Knockout mouse orthologues for homo sapiens
    DS_1586                        danio_rerio_KO_mouse_orthologues
    Knockout mouse orthologues for zebrafish
    DS_1587                        constrained_regions
    Regions of constrained elements outside of current GENCODE annotation from TFBS, RNA-Seq, open chromatin and other RNA data (supplied by ENCODE comparative group). ENCODE usage restrictions apply.
    DS_1588                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1589                        BacAbs
    predictions for organisms studied by the
    BacAbs project
    DS_1590                        hydroph
    hydroph
    DS_1591                        KD_hydroph
    KD_hydroph
    DS_1592                        BM_hydroph
    BM_hydroph
    DS_1593                        metatm
    metatm
    DS_1594                        MGI Representative Transcripts
    Mouse_37; MGI_Representative_Transcripts track; MGI Representative Transcripts; For all MGI gene and transcript tracks (i.e. not including ENSEMBL and NCBI gene models and the VEGA annotations) coordinates in the build 36 assembly were either downloaded from UCSC (mrnas, ests, refseq NM and NRs) or BLATted locally (tigr, DoTS, NIA, and refseq XM and XRs). Local BLAT results were filtered using pslReps -singleHit. These pools of coordinates were subsequently mined for relevant sequences based on various MGI database reports. Entries in the track are named using the GenBank sequence ID prepended to the MGI symbol. Each item in the track links to the corresponding MGI marker detail page.
    DS_1595                        QTL
    Mouse_37; QTL track; QTL; Quantitative trait loci were mapped to the build 36 assembly based on the known location of the STS markers that define the peaks and flanks of the QTL. Each QTL entry in the track links to the corresponding MGI marker detail page. As most QTLs that have flank as well as peak data are far longer than the 1 Mbase GBrowse easily displays, the QTL track is also shown in a compressed form in the overview panel.
    DS_1596                        Adipose_tissue
    Mouse_37; Adipose_tissue track; Adipose_tissue; Please see notes under MGI_Representative_Transcripts track for assembly and coordinate details. The MGI database report, MGI_PhenotypicAllele.rpt, was parsed for markers and alleles that are associated with transcripts (not including gene model transcripts) and the Top Level Mammalian Phenotype (MP) terms were captured. Note that these top level terms can be associated with a marker multiple times (i.e. via multiple alleles). A track for each of the top-level MP terms, were then created. Within each track, the intron-exon structure of the transcript representing that marker has been preserved in the display. Track entries are named with a catenation of seqID, marker symbol, and MP term. From the phenotypes tracks, each entry links to a page that summarizes the phenotypic/allele details. The Mammalian Phenotype Ontology can be browsed here.
    DS_1597                        Behavior_neurological
    Mouse_37; Behavior_neurological track; Behavior_neurological; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1598                        Cardiovascular_system
    Mouse_37; Cardiovascular_system track; Cardiovascular_system; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1599                        Cellular
    Mouse_37; Cellular track; Cellular; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1600                        Craniofacial
    Mouse_37; Craniofacial track; Craniofacial; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1601                        Digestive_alimentary
    Mouse_37; Digestive_alimentary track; Digestive_alimentary; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1602                        Embryogenesis
    Mouse_37; Embryogenesis track; Embryogenesis; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1603                        Endocrine_exocrine_gland
    Mouse_37; Endocrine_exocrine_gland track; Endocrine_exocrine_gland; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1604                        Growth_size
    Mouse_37; Growth_size track; Growth_size; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1605                        Hearing_ear
    Mouse_37; Hearing_ear track; Hearing_ear; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1606                        Hematopoietic_system
    Mouse_37; Hematopoietic_system track; Hematopoietic_system; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1607                        Homeostasis_metabolism
    Mouse_37; Homeostasis_metabolism track; Homeostasis_metabolism; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1608                        Immune_system
    Mouse_37; Immune_system track; Immune_system; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1609                        Lethality-embryonic_perinatal
    Mouse_37; Lethality_embryonic_perinatal track; Lethality-embryonic_perinatal; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1610                        Lethality-postnatal
    Mouse_37; Lethality_postnatal track; Lethality-postnatal; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1611                        Life_span-post-weaning_aging
    Mouse_37; Life_span_post_weaning_aging track; Life_span-post-weaning_aging; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1612                        Limbs_digits_tail
    Mouse_37; Limbs_digits_tail track; Limbs_digits_tail; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1613                        Liver_biliary_system
    Mouse_37; Liver_biliary_system track; Liver_biliary_system; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1614                        Muscle
    Mouse_37; Muscle track; Muscle; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1615                        Nervous_system
    Mouse_37; Nervous_system track; Nervous_system; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1616                        Pigmentation
    Mouse_37; Pigmentation track; Pigmentation; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1617                        Renal_urinary_system
    Mouse_37; Renal_urinary_system track; Renal_urinary_system; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1618                        Reproductive_system
    Mouse_37; Reproductive_system track; Reproductive_system; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1619                        Respiratory_system
    Mouse_37; Respiratory_system track; Respiratory_system; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1620                        Skeleton
    Mouse_37; Skeleton track; Skeleton; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1621                        Skin_coat_nails
    Mouse_37; Skin_coat_nails track; Skin_coat_nails; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1622                        Taste_olfaction
    Mouse_37; Taste_olfaction track; Taste_olfaction; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1623                        Touch_vibrissae
    Mouse_37; Touch_vibrissae track; Touch_vibrissae; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1624                        Tumorigenesis
    Mouse_37; Tumorigenesis track; Tumorigenesis; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1625                        Vision_eye
    Mouse_37; Vision_eye track; Vision_eye; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1626                        Normal_phenotype
    Mouse_37; Normal_phenotype track; Normal_phenotype; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1627                        Other_phenotype
    Mouse_37; Other_phenotype track; Other_phenotype; Please see notes under Adipose_tissue track in phenotypes for phenotype details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1628                        Alleles_induced
    Mouse_37; Alleles_induced track; Alleles_induced; Please see notes under Alleles_gene_trapped track in Alleles for allele details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1629                        Alleles_spontaneous
    Mouse_37; Alleles_spontaneous track; Alleles_spontaneous; Please see notes under Alleles_gene_trapped track in Alleles for allele details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1630                        Alleles_targeted
    Mouse_37; Alleles_targeted track; Alleles_targeted; Please see notes under Alleles_gene_trapped track in Alleles for allele details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1631                        Alleles_transgenic
    Mouse_37; Alleles_transgenic track; Alleles_transgenic; Please see notes under Alleles_gene_trapped track in Alleles for allele details and notes under MGI_Representative_Transcripts track for assembly and coordinate details
    DS_1632                        GeneTraps_per_Gene
    Mouse_37; GeneTraps_per_gene track; GeneTraps_per_Gene; Color-coded gene trap frequency track for MGI genes, indicating the number of gene trap insertions per gene. Only gene trap insertions that "trap" a gene (i.e., overlap the gene's coordinates in the correct transcriptional orientation) are counted.  If gene model colored red there are >1000 gene traps associated with the gene, orange is 101 to 1000, green is 11 to 100, blue is 2 to 10, violet is just a single genetrap, and black is no gene traps associated with the gene.
    DS_1633                        GeneTraps_RNA_tags
    Mouse_37; MGI_RNA_Gtraps track; GeneTraps_RNA_tags; Gene Trap sequence tags from GenBank dbGSS that have an RNA-based sequence tag method (5'-RACE or 3'-RACE).  RNA-based gene trap sequence tags are derived from the exon adjacent to the insertion site.  If the sequence tag method is 5'-RACE (blue), the insertion site is in the intron downstream from the most 3' exon represented in the sequence tag.  If the sequence tag is 3'-RACE (green), the insertion site is in the intron upstream from the most 5' exon represented in the sequence tag.  Gene trap mutagenesis requires that the vector inserts in the correct transcriptional orientation of the "trapped" gene.  Sequence tags that overlap known genes in the opposite transcriptional orientation do not disrupt those genes from a gene trapping mechanism, and are not counted in the GeneTraps_per_Gene track.
    DS_1634                        asd_gene
    [GeneView] AltSplice features on human and mouse genes.
    DS_1635                        atd_gene
    [GeneView] AltTrans features on human and mouse genes.
    DS_1636                        NASC (fei_0)
    Variants from the European Arabidopsis Stock Centre
    DS_1637                        asd_snp_mouse
    [ContigView] SNPs on AltSplice mouse alternative splicing patterns.
    DS_1638                        atd_mouse
    [ContigView] AltTrans mouse alternative transcript patterns.
    DS_1639                        NASC (van_0)
    Variants from the European Arabidopsis Stock Centre
    DS_1640                        NASC (c24)
    Variants from the European Arabidopsis Stock Centre
    DS_1641                        NASC (bay_0)
    Variants from the European Arabidopsis Stock Centre
    DS_1642                        asd_snp_human
    [ContigView] SNPs on AltSplice human alternative splicing patterns.
    DS_1643                        NASC (tamm_2)
    Variants from the European Arabidopsis Stock Centre
    DS_1644                        NASC (got_7)
    Variants from the European Arabidopsis Stock Centre
    DS_1645                        asd_human
    [ContigView] AltSplice human alternative splicing patterns.
    DS_1646                        NASC (tsu_1)
    Variants from the European Arabidopsis Stock Centre
    DS_1647                        NASC (nfa_8)
    Variants from the European Arabidopsis Stock Centre
    DS_1648                        JHU MS
    [Anopheles gambiae] MS data from Pandey lab, JHU
    DS_1649                        atd_human
    [ContigView] AltTrans human alternative transcript patterns.
    DS_1650                        Transposons
    [Anopheles gambiae] Transposons annotated on chromosome coordinates.
    DS_1651                        NASC (lov_5)
    Variants from the European Arabidopsis Stock Centre
    DS_1652                        NASC (bur_0)
    Variants from the European Arabidopsis Stock Centre
    DS_1653                        NASC (br_0)
    Variants from the European Arabidopsis Stock Centre
    DS_1654                        NASC (ler_1)
    Variants from the European Arabidopsis Stock Centre
    DS_1655                        asd_mouse
    [ContigView] AltSplice mouse alternative splicing patterns.
    DS_1656                        NASC (ts_1)
    Variants from the European Arabidopsis Stock Centre
    DS_1657                        NASC (est_1)
    Variants from the European Arabidopsis Stock Centre
    DS_1658                        NASC (rrs_7)
    Variants from the European Arabidopsis Stock Centre
    DS_1659                        NASC (shakhdara)
    Variants from the European Arabidopsis Stock Centre
    DS_1660                        NASC (bor_4)
    Variants from the European Arabidopsis Stock Centre
    DS_1661                        NASC (rrs_10)
    Variants from the European Arabidopsis Stock Centre
    DS_1662                        NASC (cvi_0)
    Variants from the European Arabidopsis Stock Centre
    DS_1663                        citexplore_split
    The top citations for a PDB ID, Uniprot Accession or gene name, sourced from CiteXplore.
    DS_1664                        Top Selective Sweep Regions
    DAS source providing coordinates of the regions with the z-scores amongst the smallest 5% of all regions identified by Selective Sweep Scan
    DS_1665                        Catalog of Changes
    DAS source providing Neandertal alleles for positions of non-synonymous difference between human and chimpanzee
    DS_1666                        Selective Sweep Error
    DAS source providing the standard error for corresponding z-scores from the Selective Sweep Scan
    DS_1667                        Selective Sweep Z-scores
    DAS source providing z-scores from the Selective Sweep Scan
    DS_1668                        PDBe Summary
    Basic summary data for PDB structures.
    DS_1669                        phdsec
    phdsec
    DS_1670                        toppred
    toppred
    DS_1671                        phdacc
    phdacc
    DS_1672                        signalp
    signalp
    DS_1673                        phdhtm
    phdhtm
    DS_1674                        phobius
    phobius
    DS_1675                        hmmtop
    hmmtop
    DS_1948                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1949                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1950                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1951                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1952                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1953                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1954                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1955                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1956                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1957                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1958                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1959                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1960                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1961                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1962                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1963                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1964                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1965                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1966                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1967                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1968                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1969                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1970                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1971                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1972                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1973                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1974                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1975                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1976                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1977                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1978                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1979                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1980                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1981                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1982                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1983                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1984                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1985                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1986                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1987                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1988                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1989                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1990                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1991                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1992                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1993                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1994                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1995                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_1996                        pubmed2ensembl
    www.pubmed2ensembl.org -- linking publications and genes
    DS_2057                        IMGT DAS Sources
    Mus musculus IG and TR genes located
    using IMGT reference sequences.
    DS_2058                        IKMC_Trapped_Alleles
    IKMC Trapped Alleles
    DS_2059                        hs35_clone
    Cloneset information from a NCBI35 assembly based Ensembl
    DS_2060                        spectral34
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2061                        ens_36_imprinted_genes
    Imprinted genes (Otago website) mapped to NCBI 36
    DS_2063                        ens_m35_genetrap
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2064                        ens_m36_genetrap
    GeneTrap DAS Source For M36 Mouse Assembly: GeneTrap sequence tags generated by the International Gene Trap Consortium and mapped to the NCBI m36 mouse assembly.
    DS_2065                        ens3335genes
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2066                        ens_ncbi_35_morbid
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2067                        pigends_all_humanNCBI35
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2068                        pigends_all_humanNCBI36
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2069                        snp_Zv4
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2070                        indel_Zv4
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2071                        snp_Zv5
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2072                        indel_Zv5
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2073                        ens_36_exoseq_sts
    STS designed to amplify and sequence exons in the ExoSeq SNP detection program (NCBI36 coordinates).
    DS_2074                        ens_35_compugen
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2075                        ens_36_compugen
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2076                        ens_m33_compugen
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2077                        ens_rat34_compugen
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2078                        ens_rat34_bacend
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2079                        ens_35_toronto_dbgv
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2080                        ens_35_genexref
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2081                        ens_m33_genexref
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2082                        ens_m33_nia_genes
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2083                        ens_m33_mgi_pheno
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2084                        ens_m34_129AB22
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2085                        ens_m35_129AB22
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2086                        ens_m36_129AB22
    AB 2.2 Clones DAS Source For M36 Mouse Assembly: The end read sequences have been mapped to the M36 Mouse assembly using SSAHA.
    DS_2087                        ens_m34_compugen
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2089                        ens_m36_compugen
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2090                        ens_m34_geneid
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2091                        ens_m35_geneid
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2092                        ens_m36_geneid
    geneid DAS Source For M36 Mouse Assembly: The geneid v1.2 gene predictions for the M36 Mouse assembly.
    DS_2093                        ens_m34_sgp
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2094                        ens_m35_sgp
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2095                        ens_m36_sgp
    sgp DAS Source For M36 Mouse Assembly: The sgp gene predictions for the M36/ mm8 Mouse assembly.
    DS_2096                        ens_m34_refseq
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2097                        ens_m35_refseq
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2098                        ens_m36_refseq
    NCBI RefSeq mappings to Mouse NCBIM36 C57BL/6J reference assembly
    DS_2099                        ens_36_refseq
    NCBI RefSeq mappings to Human NCBI36 reference assembly
    DS_2100                        ens_m34_nia_genes
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2101                        ens_m35_nia_genes
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2102                        ens_m36_nia_genes
    NIA Mouse Gene Index
    DS_2103                        ens_m34_nod_clones
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2104                        ens_m35_nod_clones
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2105                        ens_m36_nod_clones
    NOD BAC Library DAS Source For M36 Mouse Assembly:The NOD/MrkTac Mouse BAC Library end sequences have been mapped to the M36 Mouse assembly using SSAHA.
    DS_2106                        ens_m36_nodtiling
    NOD BAC MTP DAS Source For M36 Mouse Assembly: A subset of the NOD/MrkTac Mouse BAC Library, as mapped in the full DAS, representing a minimum tiling path (with 20K bp clone overlap).
    DS_2107                        ens_m34_chori_clones
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2108                        ens_m35_chori_clones
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2109                        ens_m36_chori_clones
    CHORI-29 NOD BAC Library DAS Source For M36 Mouse Assembly: The CHORI-29 NOD Mouse BAC Library end sequences have been mapped to the M36 Mouse assembly using SSAHA.
    DS_2110                        ens_m36_choritiling
    CHORI-29 NOD BAC MTP DAS Source For M36 Mouse Assembly: A subset of the CHORI-29 NOD Mouse BAC Library, as mapped in the full DAS, representing a minimum tiling path (with 20K bp clone overlap).
    DS_2111                        ens_m35_c3h_bacs
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2112                        ens_m36_c3h_bacs
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2113                        ens_m34_micer
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2114                        ens_m35_micer
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2115                        ens_m36_micer
    MICER DAS Source For M36 Mouse Assembly: The http://www.sanger.ac.uk/PostGenomics/mousegenomics/ Mutagenic Insertion and Chromosome Engineering Resource (MICER) provides vectors for generating knockout mice, and for chromosome engineering.  The end read sequences have been mapped to the M36 Mouse http://www.ncbi.nlm.nih.gov/genome/seq/NCBIContigInfo.html using http://www.sanger.ac.uk/Software/analysis/SSAHA/. The associated stylesheet suggest glyphs for the clones which match the colour and shape of those described in the paper Mutagenic insertion and chromosome engineering resource (MICER).Adams DJ, Biggs PJ, Cox T, Davies R, van der Weyden L, Jonkers J, Smith J, Plumb B, Taylor R, Nishijima I, Yu Y, Rogers J, Bradley A Nat Genet. 2004;36;867-71. PMID: 15235602
    DS_2116                        ens_m34_bac
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2117                        ens_m34_bacmap
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2118                        ens_m36_bacmap
    BAC Clones (RP23/24 libraries) DAS Source For M36 C57BL/6J Mouse Assembly:  End read sequences have been mapped to the M36 Mouse assembly using SSAHA. Clones positioned by appropriate read end pairs are indictated by gold rectangles with black outlines.  Fingerprinting maps allow the positioning of extra clones (using map2gp). These are indicated by gold rectangles without outlines. These may be associated (depicted with horizontal line) with single SSAHA mapped read ends (which are depicted as narrower black rectangles).
    DS_2119                        ens_m34_msm
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2120                        ens_m35_msm
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2121                        ens_m36_msm
    MSM BAC Library DAS Source For M36 Mouse Assembly: The MSM Mouse BAC Library end sequences have been mapped to the M36 Mouse assembly using SSAHA.
    DS_2122                        ens_m34_dots
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2123                        ens_m34_mgc
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2124                        ens_m35_mgc
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2125                        ens_m36_mgc
    MGC DAS Source For M36 Mouse Assembly: Transcripts from full-length open reading frame (FL-ORF) clones provided by the Mammalian Gene Collection (MGC) mapped (by UCSC) to the M36 Mouse assembly.
    DS_2126                        ens_m35_gnomon
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2127                        ens_m36_gnomon
    NCBI Gnomon HMM predictions for Mouse NCBIM36 C57BL/6J reference assembly
    DS_2128                        ens_36_gnomon
    NCBI Gnomon HMM predictions for Human NCBI36 reference assembly
    DS_2129                        ens_35_hver
    Sanger Hver Array mapping to NCBI35 reference assembly
    DS_2130                        ens_36_hver
    Sanger Hver Array mapping to NCBI36 reference assembly
    DS_2131                        ens_35_horse
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2132                        ens_35_cpg_clones
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2133                        ens_36_cpg_clones
    CpG clones created using a methylated region bias selection technique mapped to the NCBI36 human assembly
    DS_2134                        ens_36_cpg_eponine
    CpG predicitons by Eponine on NCBI36 human assembly
    DS_2143                        ens_m34_1Mb_clones
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2144                        ens_m34_0.5Mb_clones
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2145                        ens_m36_1Mb_clones
    The C57BL/6J 1MB clone subset from the RP23/24 libraries.
    DS_2146                        ens_m36_0.5Mb_clones
    The C57BL/6J 0.5MB clone subset from the RP23/24 libraries.
    DS_2147                        ens_m37_1Mb_clones
    The C57BL/6J 1MB clone subset from the RP23/24 libraries.
    DS_2148                        ens_m37_0.5Mb_clones
    The C57BL/6J 0.5MB clone subset from the RP23/24 libraries.
    DS_2150                        ens_35_m2h
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2151                        ens_35_m2h2
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2152                        ens_35_m2d2
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2153                        ens_35_m2m2
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2154                        ens_35_illumina
    Illumina probes mapped to NCBI35 Homo Sapiens assembly using SSAHA2
    DS_2155                        ens_36_illumina
    Illumina probes mapped to NCBI36 Homo Sapiens assembly using SSAHA2
    DS_2156                        ens_m34_illumina
    Illumina probes mapped to NCBIM34 Mus musculus assembly using SSAHA2
    DS_2157                        ens_m35_illumina
    Illumina probes mapped to NCBIM35 Mus musculus assembly using SSAHA2
    DS_2158                        ens_m36_illumina
    Illumina probes mapped to NCBIM36 Mus musculus assembly using SSAHA2
    DS_2159                        ens_m34_tilingpath_clones
    The C57BL/6J tiling path clone set from the RP23/24 libraries.
    DS_2160                        ens_m35_tilingpath_clones
    The C57BL/6J tiling path clone set from the RP23/24 libraries.
    DS_2161                        ens_m36_tilingpath_clones
    The C57BL/6J tiling path clone subset from the RP23/24 libraries.
    DS_2162                        ens_m37_tilingpath_clones
    The C57BL/6J tiling path clone subset from the RP23/24 libraries.
    DS_2163                        ens_35_COX_SNP
    SNPs formed when comparing the COX haplotype against PGF
    DS_2164                        ens_35_COX_DIP
    DIPs formed when comparing the COX haplotype against PGF
    DS_2165                        ens_35_QBL_SNP
    SNPs formed when comparing the QBL haplotype against PGF
    DS_2166                        ens_35_QBL_DIP
    DIPs formed when comparing the QBL haplotype against PGF
    DS_2167                        ens_35_APD_SNP
    SNPs formed when comparing the APD haplotype against PGF
    DS_2168                        ens_35_APD_DIP
    DIPs formed when comparing the APD haplotype against PGF
    DS_2169                        ens_35_DBB_SNP
    SNPs formed when comparing the DBB haplotype against PGF
    DS_2170                        ens_35_DBB_DIP
    DIPs formed when comparing the DBB haplotype against PGF
    DS_2171                        ens_35_MCF_SNP
    SNPs formed when comparing the MCF haplotype against PGF
    DS_2172                        ens_35_MCF_DIP
    DIPs formed when comparing the MCF haplotype against PGF
    DS_2173                        ens_35_MANN_SNP
    SNPs formed when comparing the MANN haplotype against PGF
    DS_2174                        ens_35_MANN_DIP
    DIPs formed when comparing the MANN haplotype against PGF
    DS_2175                        ens_35_SSTO_SNP
    SNPs formed when comparing the SSTO haplotype against PGF
    DS_2176                        ens_35_SSTO_DIP
    DIPs formed when comparing the SSTO haplotype against PGF
    DS_2177                        ens_35_operon
    Mapping of Operon primers to NCBI35
    DS_2178                        ens_m34_operon
    Mapping of Operon primers to NCBIM34
    DS_2179                        ens_m35_operon
    Mapping of Operon primers to NCBIM35
    DS_2180                        ens_36_fosmid
    Fosmids positioned by pairing SSAHA2 alignments of their sequence ends to the NCBI36 assembly.
    DS_2181                        ens_36_agfosmid
    Agincourt Fosmids positioned by pairing SSAHA2 alignments of their sequence ends to the NCBI36 assembly.
    DS_2182                        ens_36_chori17
    CHORI 17 BAC DAS Source For 36 Human Assembly: The BAC end read sequences have been mapped to the NCBI36 Human assembly using SSAHA2 and the BACs positioned from suitable alignment pairs.
    DS_2183                        swat_m36_Rassf1aMV
    Rassf1aMV -- Viral insertion sites SSAHA2 mapped to NCBI M36 assembly (RT35882).
    DS_2184                        swat_m33_Nanog
    Binding sites for Nanog on NCBI M33 assembly (source doi:10.1038/ng1760).
    DS_2185                        swat_m36_Nanog
    Binding sites for Nanog mapped (using LiftOver) onto NCBI M36 assembly from M33 (source doi:10.1038/ng1760).
    DS_2186                        swat_m33_Oct4
    Binding sites for Oct4 on NCBI M33 assembly (source doi:10.1038/ng1760).
    DS_2187                        swat_m36_Oct4
    Binding sites for Oct4 mapped (using LiftOver) onto NCBI M36 assembly from M33 (source doi:10.1038/ng1760).
    DS_2188                        ens_m37_micer
    ens_m37_micer
    DS_2189                        iPfamDomain
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2190                        ens_m33_nodclone
    NCBI Mouse 33 NOD Clones
    DS_2191                        ens_ncbi_35_32krearray
    BACPAC 32K Rearray
    DS_2192                        ens_ncbi_35_bacend
    BAC End Pairs
    DS_2193                        ens_ncbi_35_fosmid
    Fosmid End Pairs
    DS_2194                        ens_rgsc_31_bacend
    RAT BAC End Pairs
    DS_2195                        ens_rgsc_31_fgenes
    Rat fgenes Predictions
    DS_2196                        ens_rgsc_31_gnomon
    Rat Gnomon Predictions
    DS_2197                        ens_rgsc_31_ncbi
    NCBI Genes
    DS_2198                        ens_rgsc_31_refseq
    Rat Refseq
    DS_2199                        ens_rgsc_31_rgdgene
    RGD genes
    DS_2200                        ens_rgsc_31_twinscan
    Twinscan Gene Predictions
    DS_2201                        Mouse Fosmids at Sanger
    A special subset of all mouse fosmids (those with clones available at WT Sanger Institute) mapped to M37
    DS_2202                        GRC region zebrafish genome Zv9
    Region reported to the Genome Reference Consortium Zv9
    DS_2203                        evigan_predictions
    Alternative splice site predictions from the program Evigan by Qian Liu.
    DS_2215                        PED
    The Pancreatic Expression database (PED,
    http://www.pancreasexpression.org) is the main
    repository for pancreatic cancer derived -omics data
    DS_2611                        TEPIDAS
    TEPIDAS
    DS_2612                        BCCTB
    Breast Cancer Campaign Tissue Bank Bioinformatics
    Portal
    DS_2613                        gencode_exp_verification
    Tested Gencode transcript splice junctions from experimental validation (UNIL)
    DS_2614                        unc_msdas peptides
    Mass-Spec peptides mapped to GRCh37 6-frame translations (Univ. North Carolina)
    DS_2616                        EA_regions_36
    Affy 500K (redon et al) mapped to NCBI 36
    DS_2617                        ens_35_aceview
    Note: the coordinate system for this source was guessed by an automated proceedure at the sanger - if you think this is incorrect please email das-core@sanger.ac.uk with the source id
    DS_2618                        swat_34_rearrangement_hotspots
    The 130 rearrangement hotspots from doi:10.1038/ng1862 on NCBI34 HG16.
    DS_2619                        swat_36_rearrangement_hotspots
    95 of the 130 Rearrangement hotspots from doi:10.1038/ng1862 successfully mapped (from NCBI34 HG16) to NCBI36 HG18 (using UCSC's liftOver).
    DS_2620                        swat_m36_p717tags
    Mapped insertion tags
    DS_2627                        Selectome
    Selectome is a database of positive
    selection on gene trees.
    DS_2738                        DARNED
    RNA editing instances in human.
    DS_2739                        testbam
    test bam registration
    DS_2740                        Danio_rerio.VEGA43-clone.transcript
    Annotation source (returns clones) for Danio_rerio transcript
    DS_2741                        Danio_rerio.VEGA43-clone.translation
    Annotation source (returns clones) for Danio_rerio translation
    DS_2742                        Danio_rerio.VEGA43.prediction_transcript
    Annotation source for Danio_rerio prediction_transcript
    DS_2743                        Danio_rerio.VEGA43.reference
    Danio_rerio Reference server based on VEGA43 assembly. Contains 27 top level entries.
    DS_2744                        Danio_rerio.VEGA43.transcript
    Annotation source for Danio_rerio transcript
    DS_2745                        Danio_rerio.VEGA43.translation
    Annotation source for Danio_rerio translation
    DS_2753                        Cafe Variome Diagnostic Variants (human GRCh 37)
    Cafe Variome - diagnostic variants
    (Human GRCh 37)
    DS_2754                        ctcf_ptr
    blady blah
    DS_2755                        Sample BAM file from Loraine Lab
    75 base single end Illumina reads aligned onto the A_thaliana_Jun_2009 (TAIR9) genome assembly using TopHat. The library was prepared from three week old seedlings undergoing simulated drought stress.
    DS_2763                        CATH Domains
    Manually curated structural domain boundaries for PDB structures
    DS_2766                        CATH Structural Domain Alignments
    3D Alignments of highly structurally similar protein domains
    DS_2769                        pbg
    pJazz large-fragment library by O. Billker group
    DS_2770                        Homo_sapiens.VEGA44-clone.transcript
    Annotation source (returns clones) for Homo_sapiens transcript
    DS_2771                        Homo_sapiens.VEGA44-clone.translation
    Annotation source (returns clones) for Homo_sapiens translation
    DS_2772                        Homo_sapiens.VEGA44.karyotype
    Annotation source for Homo_sapiens karyotype
    DS_2773                        Homo_sapiens.VEGA44.prediction_transcript
    Annotation source for Homo_sapiens prediction_transcript
    DS_2774                        Homo_sapiens.VEGA44.reference
    Homo_sapiens Reference server based on VEGA44 assembly. Contains 40 top level entries.
    DS_2775                        Homo_sapiens.VEGA44.transcript
    Annotation source for Homo_sapiens transcript
    DS_2776                        Homo_sapiens.VEGA44.translation
    Annotation source for Homo_sapiens translation
    DS_2777                        Mus_musculus.VEGA44-clone.transcript
    Annotation source (returns clones) for Mus_musculus transcript
    DS_2778                        Mus_musculus.VEGA44-clone.translation
    Annotation source (returns clones) for Mus_musculus translation
    DS_2779                        Mus_musculus.VEGA44.karyotype
    Annotation source for Mus_musculus karyotype
    DS_2780                        Mus_musculus.VEGA44.prediction_transcript
    Annotation source for Mus_musculus prediction_transcript
    DS_2781                        Mus_musculus.VEGA44.reference
    Mus_musculus Reference server based on VEGA44 assembly. Contains 40 top level entries.
    DS_2782                        Mus_musculus.VEGA44.transcript
    Annotation source for Mus_musculus transcript
    DS_2783                        Mus_musculus.VEGA44.translation
    Annotation source for Mus_musculus translation
    DS_2784                        RRBS HIPE
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HIPE cells (merged replicates).
    DS_2785                        RRBS HRE
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HRE cells (merged replicates).
    DS_2786                        RRBS HEK293
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HEK293 cells (merged replicates).
    DS_2787                        RRBS HRPE
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HRPE cells (merged replicates).
    DS_2788                        RRBS HPAE
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HPAE cells (merged replicates).
    DS_2789                        RRBS NT2D1
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for NT2D1 cells (merged replicates).
    DS_2790                        RRBS NB4
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for NB4 cells (merged replicates).
    DS_2791                        RRBS CMK
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for CMK cells (merged replicates).
    DS_2792                        RRBS IMR-90
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for IMR-90 cells (merged replicates).
    DS_2793                        RRBS GM12892
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for GM12892 cells (merged replicates).
    DS_2794                        RRBS SKNShra
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for SKNShra cells (merged replicates).
    DS_2795                        RRBS HNPCE
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HNPCE cells (merged replicates).
    DS_2796                        RRBS GM12891
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for GM12891 cells (merged replicates).
    DS_2797                        RRBS SAEC
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for SAEC cells (merged replicates).
    DS_2798                        RRBS AG09309
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for AG09309 cells (merged replicates).
    DS_2799                        RRBS H1-hESC
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for H1-hESC cells (merged replicates).
    DS_2800                        RRBS PanIslet
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for Pancreatic Islet cells (merged replicates).
    DS_2801                        RRBS HCT116
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HCT116 cells (merged replicates).
    DS_2802                        RRBS GM12878
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for GM12878 cells (merged replicates).
    DS_2803                        RRBS HCPE
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HCPE cells (merged replicates).
    DS_2804                        RRBS AG10803
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for AG10803 cells (merged replicates).
    DS_2805                        RRBS NHA
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for NHA cells (merged replicates).
    DS_2806                        RRBS Osteoblast
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for Osteoblast cells (merged replicates).
    DS_2807                        RRBS MCF-7
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for MCF-7 cells (merged replicates).
    DS_2808                        RRBS Jurkat
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for Jurkat cells (merged replicates).
    DS_2809                        RRBS SkMC
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for Skeletal Muscle cells (merged replicates).
    DS_2810                        RRBS HCM
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HCM cells (merged replicates).
    DS_2811                        RRBS HRCE
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HRCE cells (merged replicates).
    DS_2812                        RRBS AG09319
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for AG09319 cells (merged replicates).
    DS_2813                        RRBS NHDF-neo
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for NHDF-neo cells (merged replicates).
    DS_2814                        RRBS HEE
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HEE cells (merged replicates).
    DS_2815                        RRBS HAE
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HAE cells (merged replicates).
    DS_2816                        RRBS HMEC
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HMEC cells (merged replicates).
    DS_2817                        RRBS GM19240
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for GM19240 cells (merged replicates).
    DS_2818                        RRBS AG04450
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for AG04450 cells (merged replicates).
    DS_2819                        RRBS HSMMt
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HSMMt cells (merged replicates).
    DS_2820                        RRBS Hep-G2
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for Hep-G2 cells (merged replicates).
    DS_2821                        RRBS GM19239
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for GM19239 cells (merged replicates).
    DS_2822                        RRBS K562
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for K562 cells (merged replicates).
    DS_2823                        RRBS Fibroblast
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for Fibroblast cells (merged replicates).
    DS_2824                        RRBS NHBE
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for NHBE cells (merged replicates).
    DS_2825                        RRBS HCF
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for HCF cells (merged replicates).
    DS_2826                        RRBS AG04449
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for AG04449 cells (merged replicates).
    DS_2827                        RRBS Melanocyte
    Reduced representation bisulphite sequencing (RRBS) from ENCODE for Melanocyte cells (merged replicates).
    DS_4075                        Homo_sapiens.VEGA46-clone.transcript
    Annotation source (returns clones) for Homo_sapiens transcript
    DS_4076                        Homo_sapiens.VEGA46-clone.translation
    Annotation source (returns clones) for Homo_sapiens translation
    DS_4077                        Homo_sapiens.VEGA46.karyotype
    Annotation source for Homo_sapiens karyotype
    DS_4078                        Homo_sapiens.VEGA46.prediction_transcript
    Annotation source for Homo_sapiens prediction_transcript
    DS_4079                        Homo_sapiens.VEGA46.reference
    Homo_sapiens Reference server based on VEGA46 assembly. Contains 76 top level entries.
    DS_4080                        Homo_sapiens.VEGA46.transcript
    Annotation source for Homo_sapiens transcript
    DS_4081                        Homo_sapiens.VEGA46.translation
    Annotation source for Homo_sapiens translation
    DS_4082                        Mus_musculus.VEGA46-clone.transcript
    Annotation source (returns clones) for Mus_musculus transcript
    DS_4083                        Mus_musculus.VEGA46-clone.translation
    Annotation source (returns clones) for Mus_musculus translation
    DS_4084                        Mus_musculus.VEGA46.karyotype
    Annotation source for Mus_musculus karyotype
    DS_4085                        Mus_musculus.VEGA46.prediction_transcript
    Annotation source for Mus_musculus prediction_transcript
    DS_4086                        Mus_musculus.VEGA46.reference
    Mus_musculus Reference server based on VEGA46 assembly. Contains 40 top level entries.
    DS_4087                        Mus_musculus.VEGA46.transcript
    Annotation source for Mus_musculus transcript
    DS_4088                        Mus_musculus.VEGA46.translation
    Annotation source for Mus_musculus translation
    DS_4089                        Pan_troglodytes.VEGA46-clone.transcript
    Annotation source (returns clones) for Pan_troglodytes transcript
    DS_4090                        Pan_troglodytes.VEGA46-clone.translation
    Annotation source (returns clones) for Pan_troglodytes translation
    DS_4091                        Pan_troglodytes.VEGA46.prediction_transcript
    Annotation source for Pan_troglodytes prediction_transcript
    DS_4092                        Pan_troglodytes.VEGA46.reference
    Pan_troglodytes Reference server based on VEGA46 assembly. Contains 1 top level entries.
    DS_4093                        Pan_troglodytes.VEGA46.transcript
    Annotation source for Pan_troglodytes transcript
    DS_4094                        Pan_troglodytes.VEGA46.translation
    Annotation source for Pan_troglodytes translation
    DS_5953                        EST (Nicotiana)
    259,895 Nicotiana EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_5954                        GSS (Oryza_alta)
    151,024 Oryza_alta GSS sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_5955                        EST (Mimulus)
    626,811 Mimulus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_5956                        EST (Medicago)
    111,293 Medicago EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_5957                        EST (Helianthus)
    106,250 Helianthus EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_5958                        EST_Cluster (Aquilegia)
    129,308 Aquilegia EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_5959                        EST (Glycine)
    360,608 Glycine EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_5960                        EST_Cluster (Malus)
    268,435 Malus EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_5961                        EST (Saccharum)
    266,904 Saccharum EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_5962                        EST_Cluster (Glycine)
    123,198 Glycine EST_Cluster markers mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_5963                        EST (Citrus)
    188,297 Citrus EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_5964                        EST (Glycine)
    665,911 Glycine EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_5965                        EST_Cluster (Physcomitrella)
    114,286 Physcomitrella EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_5966                        EST (Glycine)
    534,176 Glycine EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_5967                        EST (Limnanthes)
    111,345 Limnanthes EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_5968                        EST_Cluster (Triticum)
    455,425 Triticum EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_5969                        EST_Cluster (Vitis)
    111,038 Vitis EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_5970                        EST (Triticum)
    662,476 Triticum EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_5971                        EST_Cluster (Hordeum)
    178,407 Hordeum EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_5972                        EST_Cluster (Solanum)
    223,687 Solanum EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_5973                        Oligo (Oryza_sativa)
    151,964 Oryza_sativa Oligo sequences mapped to MSU version 6 of Oryza_sativa
    DS_5974                        EST (Actinidia)
    409,431 Actinidia EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_5975                        EST_Cluster (Zea)
    237,718 Zea EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_5976                        EST (Pinus)
    191,116 Pinus EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_5977                        EST (Lactuca)
    104,729 Lactuca EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_5978                        EST (Solanum)
    611,435 Solanum EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_5979                        EST (Physcomitrella)
    114,710 Physcomitrella EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_5980                        EST_Cluster (Helianthus)
    102,159 Helianthus EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_5981                        EST (Arabidopsis)
    1,480,599 Arabidopsis EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_5982                        EST (Volvox)
    114,645 Volvox EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_5983                        EST_Cluster (Brassica)
    646,227 Brassica EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_5984                        EST_Cluster (Populus)
    509,968 Populus EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_5985                        EST (Musa)
    150,081 Musa EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_5986                        EST (Solanum)
    157,131 Solanum EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_5987                        EST (Gossypium)
    858,079 Gossypium EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_5988                        EST (Solanum)
    218,411 Solanum EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_5989                        GSS (Oryza_australiensis)
    165,467 Oryza_australiensis GSS sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_5990                        EST (Coffea)
    106,002 Coffea EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_5991                        EST (Triphysaria)
    149,721 Triphysaria EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_5992                        EST_Cluster (Oryza_sativa)
    478,179 Oryza_sativa EST_Cluster markers mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_5993                        EST (Physcomitrella)
    102,618 Physcomitrella EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_5994                        EST (Raphanus)
    168,656 Raphanus EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_5995                        GSS (Oryza_nivara)
    574,299 Oryza_nivara GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_5996                        EST (Ipomoea)
    257,040 Ipomoea EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_5997                        EST_Cluster (Hordeum)
    222,246 Hordeum EST_Cluster markers mapped to BGI version 2005-01 of Oryza_indica
    DS_5998                        EST (Zea)
    951,921 Zea EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_5999                        EST (Arabidopsis)
    272,068 Arabidopsis EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6000                        EST_Cluster (Brassica)
    293,399 Brassica EST_Cluster markers mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6001                        GSS (Oryza_minuta)
    1,006,346 Oryza_minuta GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_6002                        EST (Sorghum)
    281,738 Sorghum EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6003                        EST (Oryza_sativa)
    1,410,571 Oryza_sativa EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6004                        EST (Vitis)
    279,002 Vitis EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6005                        EST_Cluster (Gossypium)
    217,599 Gossypium EST_Cluster markers mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6006                        EST_Cluster (Arabidopsis)
    132,146 Arabidopsis EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6007                        GSS (Oryza_australiensis)
    1,067,805 Oryza_australiensis GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_6008                        EST_Cluster (Triticum)
    134,234 Triticum EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6009                        EST_Cluster (Hordeum)
    280,834 Hordeum EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6010                        EST_Cluster (Populus)
    173,965 Populus EST_Cluster markers mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6011                        EST_Cluster (Triticum)
    488,376 Triticum EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6012                        EST (Gossypium)
    368,084 Gossypium EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6013                        EST (Lactuca)
    165,260 Lactuca EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6014                        EST_Cluster (Zea)
    299,129 Zea EST_Cluster markers mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6015                        EST (Nicotiana)
    615,076 Nicotiana EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6016                        GSS (Oryza_ridleyi)
    166,349 Oryza_ridleyi GSS sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6017                        EST (Panicum)
    176,359 Panicum EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6018                        EST (Picea)
    115,387 Picea EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6019                        EST (Malus)
    123,354 Malus EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6020                        EST (Nicotiana)
    113,323 Nicotiana EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6021                        EST (Glycine)
    269,540 Glycine EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6022                        EST (Solanum)
    405,995 Solanum EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6023                        EST (Actinidia)
    104,098 Actinidia EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6024                        mRNA (Zea)
    139,316 Zea mRNA sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6025                        EST (Mimulus)
    390,705 Mimulus EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6026                        EST (Vitis)
    642,330 Vitis EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6027                        EST (Picea)
    223,480 Picea EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6028                        EST (Lactuca)
    285,844 Lactuca EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6029                        mRNA (Zea)
    150,239 Zea mRNA sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6030                        EST (Carica)
    226,289 Carica EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6031                        EST_Cluster (Triticum)
    345,411 Triticum EST_Cluster markers mapped to BGI version 2005-01 of Oryza_indica
    DS_6032                        QTL (Oryza_sativa)
    8,216 Oryza_sativa QTL QTL mapped to MSU version 6 of Oryza_sativa
    DS_6033                        EST_Cluster (Raphanus)
    103,070 Raphanus EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6034                        EST_Cluster (Prunus)
    173,873 Prunus EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6035                        EST (Arabidopsis)
    661,529 Arabidopsis EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6036                        EST (Mimulus)
    270,087 Mimulus EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6037                        EST (Brassica)
    496,938 Brassica EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6038                        EST (Hordeum)
    159,831 Hordeum EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6039                        GSS (Oryza_punctata)
    102,777 Oryza_punctata GSS sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6040                        EST (Hordeum)
    672,236 Hordeum EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6041                        EST_Cluster (Glycine)
    183,076 Glycine EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6042                        EST (Eucalyptus)
    129,621 Eucalyptus EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6043                        EST (Nicotiana)
    224,469 Nicotiana EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6044                        mRNA (Oryza_sativa)
    129,246 Oryza_sativa mRNA sequences mapped to MSU version 6 of Oryza_sativa
    DS_6045                        EST (Triticum)
    1,622,880 Triticum EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6046                        EST (Ginkgo)
    118,243 Ginkgo EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6047                        EST_Cluster (Triticum)
    319,048 Triticum EST_Cluster markers mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6048                        EST (Adiantum)
    131,443 Adiantum EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6049                        EST (Glycine)
    259,011 Glycine EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6050                        EST (Phaseolus)
    103,305 Phaseolus EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6051                        EST (Raphanus)
    170,157 Raphanus EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6052                        EST (Theobroma)
    194,448 Theobroma EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6053                        EST (Malus)
    197,847 Malus EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6054                        EST (Hordeum)
    362,119 Hordeum EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6055                        EST (Prunus)
    117,423 Prunus EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6056                        EST (Festuca)
    326,355 Festuca EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6057                        EST (Triticum)
    1,422,092 Triticum EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6058                        EST (Raphanus)
    352,170 Raphanus EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6059                        GSS (Oryza_punctata)
    502,825 Oryza_punctata GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_6060                        EST (Manihot)
    114,707 Manihot EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6061                        EST (Artemisia)
    129,283 Artemisia EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6062                        EST (Vitis)
    371,979 Vitis EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6063                        EST (Pinus)
    130,604 Pinus EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6064                        EST (Zea)
    2,492,684 Zea EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6065                        EST (Poncirus)
    210,953 Poncirus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6066                        EST (Juglans)
    349,308 Juglans EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6067                        EST_Cluster (Gossypium)
    329,099 Gossypium EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6068                        EST_Cluster (Oryza_sativa)
    362,050 Oryza_sativa EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6069                        EST (Pinus)
    184,400 Pinus EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6070                        EST_Cluster (Citrus)
    279,033 Citrus EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6071                        EST_Cluster (Zea)
    423,869 Zea EST_Cluster markers mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6072                        EST (Cucumis)
    128,096 Cucumis EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6073                        EST (Nicotiana)
    281,040 Nicotiana EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6074                        EST (Physcomitrella)
    160,312 Physcomitrella EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6075                        EST (Populus)
    322,750 Populus EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6076                        EST (Vitis)
    954,344 Vitis EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6077                        EST (Medicago)
    180,391 Medicago EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6078                        EST_Cluster (Lactuca)
    212,203 Lactuca EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6079                        EST (Vitis)
    289,951 Vitis EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6080                        EST_Cluster (Sorghum)
    103,095 Sorghum EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6081                        EST (Oryza_sativa)
    1,259,576 Oryza_sativa EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6082                        EST (Medicago)
    210,244 Medicago EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6083                        EST (Medicago)
    479,774 Medicago EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6084                        EST_Cluster (Picea)
    132,772 Picea EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6085                        EST_Cluster (Sorghum)
    146,422 Sorghum EST_Cluster markers mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6086                        EST (Actinidia)
    115,119 Actinidia EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6087                        EST (Glycine)
    1,236,342 Glycine EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6088                        EST_Cluster (Populus)
    114,263 Populus EST_Cluster markers mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6089                        EST (Hordeum)
    524,972 Hordeum EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6090                        EST (Malus)
    576,771 Malus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6091                        EST (Juglans)
    138,196 Juglans EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6092                        EST (Populus)
    113,144 Populus EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6093                        EST (Solanum)
    170,705 Solanum EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6094                        EST_Cluster (Arabidopsis)
    111,394 Arabidopsis EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6095                        EST (Cynodon)
    211,257 Cynodon EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6096                        EST (Panicum)
    318,572 Panicum EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6097                        EST (Festuca)
    166,857 Festuca EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6098                        EST (Oryza_sativa)
    145,215 Oryza_sativa EST sequences mapped to AGI version 454.pools.1.1 of Oryza_barthii
    DS_6099                        EST (Malus)
    149,420 Malus EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6100                        mRNA (Oryza_sativa)
    118,278 Oryza_sativa mRNA sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6101                        EST (Linum)
    111,752 Linum EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6102                        EST (Lotus)
    102,727 Lotus EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6103                        EST (Malus)
    292,799 Malus EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6104                        EST (Lotus)
    175,829 Lotus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6105                        EST (Sorghum)
    320,113 Sorghum EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6106                        EST (Euphorbia)
    102,919 Euphorbia EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6107                        EST (Citrus)
    186,790 Citrus EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6108                        EST (Pinus)
    232,208 Pinus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6109                        EST (Populus)
    1,033,078 Populus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6110                        SNPs (Arabidopsis Diversity)
    SNPs (Arabidopsis Diversity)
    DS_6111                        EST (Picea)
    103,462 Picea EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6112                        EST (Gossypium)
    458,512 Gossypium EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6113                        EST (Arachis)
    105,918 Arachis EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6114                        EST (Citrus)
    353,578 Citrus EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6115                        EST (Sorghum)
    248,553 Sorghum EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6116                        EST_Cluster (Saccharum)
    218,255 Saccharum EST_Cluster markers mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6117                        EST_Cluster (Malus)
    155,567 Malus EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6118                        EST_Cluster (Populus)
    107,086 Populus EST_Cluster markers mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6119                        EST_Cluster (Zea)
    336,277 Zea EST_Cluster markers mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6120                        EST (Populus)
    172,859 Populus EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6121                        EST (Coffea)
    107,640 Coffea EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6122                        EST (Eucalyptus)
    158,271 Eucalyptus EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6123                        EST (Cajanus)
    107,519 Cajanus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6124                        EST (Phaseolus)
    150,760 Phaseolus EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6125                        EST (Saccharum)
    289,127 Saccharum EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6126                        EST (Citrus)
    1,786,319 Citrus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6127                        EST (Populus)
    405,967 Populus EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6128                        GSS (Oryza_ridleyi)
    842,162 Oryza_ridleyi GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_6129                        EST (Prunus)
    364,112 Prunus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6130                        EST (Malus)
    110,893 Malus EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6131                        EST (Cicer)
    211,729 Cicer EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6132                        EST (Brassica)
    3,304,335 Brassica EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6133                        EST (Malus)
    189,967 Malus EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6134                        EST (Zea)
    2,103,748 Zea EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6135                        EST_Cluster (Citrus)
    131,831 Citrus EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6136                        EST_Cluster (Nicotiana)
    115,807 Nicotiana EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6137                        EST_Cluster (Saccharum)
    196,888 Saccharum EST_Cluster markers mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6138                        mRNA (Oryza_sativa)
    184,517 Oryza_sativa mRNA sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6139                        EST (Sorghum)
    109,566 Sorghum EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6140                        EST_Cluster (Helianthus)
    160,186 Helianthus EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6141                        EST (Ipomoea)
    108,629 Ipomoea EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6142                        EST (Vigna)
    167,897 Vigna EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6143                        EST_Cluster (Gossypium)
    128,897 Gossypium EST_Cluster markers mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6144                        EST_Cluster (Glycine)
    178,519 Glycine EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6145                        EST_Cluster (Brassica)
    229,887 Brassica EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6146                        EST (Festuca)
    272,988 Festuca EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6147                        EST_Cluster (Hordeum)
    249,820 Hordeum EST_Cluster markers mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6148                        GSS (Oryza_rufipogon)
    365,607 Oryza_rufipogon GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_6149                        EST (Gossypium)
    134,541 Gossypium EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6150                        EST (Arachis)
    500,202 Arachis EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6151                        EST (Theobroma)
    283,602 Theobroma EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6152                        mRNA (Oryza_sativa)
    159,324 Oryza_sativa mRNA sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6153                        EST (Arabidopsis)
    1,373,234 Arabidopsis EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6154                        EST (Oryza_sativa)
    1,071,636 Oryza_sativa EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6155                        EST (Oryza_sativa)
    320,334 Oryza_sativa EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6156                        EST (Medicago)
    230,390 Medicago EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6157                        EST (Sorghum)
    159,255 Sorghum EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6158                        EST (Saccharum)
    259,867 Saccharum EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6159                        EST_Cluster (Vitis)
    142,946 Vitis EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6160                        EST_Cluster (Brassica)
    438,497 Brassica EST_Cluster markers mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6161                        EST (Malus)
    350,004 Malus EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6162                        EST (Physcomitrella)
    296,049 Physcomitrella EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6163                        EST_Cluster (Oryza_sativa)
    338,638 Oryza_sativa EST_Cluster markers mapped to BGI version 2005-01 of Oryza_indica
    DS_6164                        EST (Panicum)
    156,610 Panicum EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6165                        mRNA (Arabidopsis)
    167,685 Arabidopsis mRNA sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6166                        EST (Solanum)
    136,308 Solanum EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6167                        EST (Selaginella)
    110,865 Selaginella EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6168                        EST (Cucumis)
    292,265 Cucumis EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6169                        EST (Oryza_sativa)
    580,119 Oryza_sativa EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6170                        EST (Zea)
    651,539 Zea EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6171                        EST_Cluster (Oryza_sativa)
    191,880 Oryza_sativa EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6172                        EST (Brassica)
    2,034,716 Brassica EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6173                        EST (Nicotiana)
    142,159 Nicotiana EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6174                        EST (Populus)
    183,728 Populus EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6175                        EST_Cluster (Triticum)
    433,834 Triticum EST_Cluster markers mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6176                        EST (Festuca)
    149,779 Festuca EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6177                        EST_Cluster (Oryza_sativa)
    325,612 Oryza_sativa EST_Cluster markers mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6178                        EST (Theobroma)
    257,670 Theobroma EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6179                        EST_Cluster (Glycine)
    357,013 Glycine EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6180                        EST (Theobroma)
    178,511 Theobroma EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6181                        EST (Phaseolus)
    157,920 Phaseolus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6182                        EST (Populus)
    108,242 Populus EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6183                        EST (Agrostis)
    124,027 Agrostis EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6184                        EST_Cluster (Brassica)
    128,946 Brassica EST_Cluster markers mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6185                        EST_Cluster (Gossypium)
    217,283 Gossypium EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6186                        EST (Oryza_sativa)
    994,446 Oryza_sativa EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6187                        EST (Vigna)
    102,055 Vigna EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6188                        EST (Vitis)
    251,409 Vitis EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6189                        EST (Capsicum)
    176,936 Capsicum EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6190                        mRNA (Oryza_sativa)
    127,928 Oryza_sativa mRNA sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6191                        EST_Cluster (Saccharum)
    129,180 Saccharum EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6192                        mRNA (Populus)
    189,542 Populus mRNA sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6193                        EST (Citrus)
    276,039 Citrus EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6194                        EST (Physcomitrella)
    416,234 Physcomitrella EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6195                        GSS (Oryza_nivara)
    168,025 Oryza_nivara GSS sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6196                        EST (Saccharum)
    105,652 Saccharum EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6197                        EST (Phaseolus)
    110,029 Phaseolus EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6198                        EST (Festuca)
    170,860 Festuca EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6199                        EST (Raphanus)
    788,031 Raphanus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6200                        EST_Cluster (Solanum)
    100,478 Solanum EST_Cluster markers mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6201                        EST (Saccharum)
    174,640 Saccharum EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6202                        EST (Picea)
    235,016 Picea EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6203                        EST (Picea)
    587,740 Picea EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6204                        EST (Physcomitrella)
    176,524 Physcomitrella EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6205                        EST (Helianthus)
    105,178 Helianthus EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6206                        EST_Cluster (Sorghum)
    127,989 Sorghum EST_Cluster markers mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6207                        EST (Glycine)
    532,173 Glycine EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6208                        EST (Zea)
    1,670,557 Zea EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6209                        EST_Cluster (Arabidopsis)
    301,985 Arabidopsis EST_Cluster markers mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6210                        EST (Vigna)
    104,916 Vigna EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6211                        EST (Prunus)
    110,920 Prunus EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6212                        EST (Ricinus)
    113,124 Ricinus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6213                        GSS (Oryza_minuta)
    221,542 Oryza_minuta GSS sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6214                        EST_Cluster (Sorghum)
    186,729 Sorghum EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6215                        EST (Eucalyptus)
    440,941 Eucalyptus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6216                        EST_Cluster (Triticum)
    171,747 Triticum EST_Cluster markers mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6217                        EST (Nicotiana)
    161,945 Nicotiana EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6218                        EST (Festuca)
    125,095 Festuca EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6219                        EST (Helianthus)
    240,582 Helianthus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6220                        EST (Glycine)
    332,673 Glycine EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6221                        EST (Arabidopsis)
    578,158 Arabidopsis EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6222                        EST (Triticum)
    1,319,165 Triticum EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6223                        EST (Gossypium)
    211,889 Gossypium EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6224                        EST_Cluster (Populus)
    263,138 Populus EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6225                        GSS (Oryza_granulata)
    116,272 Oryza_granulata GSS sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6226                        mRNA (Arabidopsis)
    111,121 Arabidopsis mRNA sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6227                        EST (Arabidopsis)
    662,987 Arabidopsis EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6228                        EST (Triticum)
    430,064 Triticum EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6229                        EST_Cluster (Gossypium)
    152,452 Gossypium EST_Cluster markers mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6230                        EST (Theobroma)
    232,357 Theobroma EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6231                        EST (Humulus)
    129,714 Humulus EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6232                        EST (Panicum)
    135,668 Panicum EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6233                        SNPs/Indels (Maize Diversity)
    SNPs/Indels (Maize Diversity)
    DS_6234                        mRNA (Zea)
    338,734 Zea mRNA sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6235                        EST (Solanum)
    309,582 Solanum EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6236                        EST (Arachis)
    187,371 Arachis EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6237                        EST (Hordeum)
    243,353 Hordeum EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6238                        EST (Mimulus)
    353,281 Mimulus EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6239                        EST_Cluster (Zea)
    523,010 Zea EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6240                        EST (Oryza_sativa)
    2,737,225 Oryza_sativa EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6241                        Oligo (Oryza_sativa)
    153,482 Oryza_sativa Oligo sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6242                        EST (Actinidia)
    143,967 Actinidia EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6243                        EST_Cluster (Vitis)
    138,124 Vitis EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6244                        EST (Physcomitrella)
    176,284 Physcomitrella EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6245                        EST (Zea)
    1,723,991 Zea EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6246                        EST (Actinidia)
    261,015 Actinidia EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6247                        GSS (Oryza_officinalis)
    140,878 Oryza_officinalis GSS sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6248                        EST (Triticum)
    1,153,915 Triticum EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6249                        EST (Phaseolus)
    101,085 Phaseolus EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6250                        EST (Picea)
    173,703 Picea EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6251                        EST (Hordeum)
    644,951 Hordeum EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6252                        EST (Cicer)
    412,514 Cicer EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6253                        GSS (Oryza_coarctata)
    140,442 Oryza_coarctata GSS sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6254                        GSS (Oryza_brachyantha)
    248,641 Oryza_brachyantha GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_6255                        EST (Lactuca)
    127,989 Lactuca EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6256                        GSS (Oryza_coarctata)
    410,100 Oryza_coarctata GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_6257                        EST (Brassica)
    1,136,236 Brassica EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6258                        EST (Panicum)
    462,123 Panicum EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6259                        EST (Oryza_sativa)
    1,378,579 Oryza_sativa EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6260                        EST (Gossypium)
    204,096 Gossypium EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6261                        EST (Vitis)
    226,783 Vitis EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6262                        EST_Cluster (Arabidopsis)
    258,713 Arabidopsis EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6263                        EST (Zea)
    1,438,958 Zea EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6264                        EST (Amborella)
    126,571 Amborella EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6265                        EST (Raphanus)
    104,764 Raphanus EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6266                        EST (Helianthus)
    120,018 Helianthus EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6267                        EST (Arabidopsis)
    250,823 Arabidopsis EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6268                        EST (Brassica)
    1,249,593 Brassica EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6269                        EST (Medicago)
    126,763 Medicago EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6270                        EST_Cluster (Oryza_sativa)
    672,599 Oryza_sativa EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6271                        EST (Chlamydomonas)
    104,753 Chlamydomonas EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6272                        EST (Prunus)
    144,949 Prunus EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6273                        EST_Cluster (Hordeum)
    208,885 Hordeum EST_Cluster markers mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6274                        mRNA (Zea)
    206,795 Zea mRNA sequences mapped to MSU version 6 of Oryza_sativa
    DS_6275                        EST (Physcomitrella)
    110,853 Physcomitrella EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6276                        GSS (Oryza_granulata)
    639,372 Oryza_granulata GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_6277                        EST (Vigna)
    173,445 Vigna EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6278                        EST_Cluster (Populus)
    221,187 Populus EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6279                        EST (Mimulus)
    223,695 Mimulus EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6280                        EST (Aquilegia)
    121,062 Aquilegia EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6281                        EST (Brassica)
    999,247 Brassica EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6282                        EST_Cluster (Brassica)
    169,969 Brassica EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6283                        GSS (Oryza_alta)
    743,479 Oryza_alta GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_6284                        EST (Panicum)
    536,155 Panicum EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6285                        GSS (Oryza_officinalis)
    723,244 Oryza_officinalis GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_6286                        EST (Lactuca)
    159,750 Lactuca EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6287                        EST (Saccharum)
    316,797 Saccharum EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6288                        EST (Nicotiana)
    117,501 Nicotiana EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6289                        EST (Citrus)
    615,852 Citrus EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6290                        EST (Citrus)
    502,784 Citrus EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6291                        EST_Cluster (Gossypium)
    610,644 Gossypium EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6292                        EST (Triphysaria)
    379,918 Triphysaria EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6293                        EST (Hordeum)
    499,908 Hordeum EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6294                        EST (Pinus)
    152,426 Pinus EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6295                        EST_Cluster (Zea)
    1,135,962 Zea EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6296                        EST_Cluster (Sorghum)
    130,063 Sorghum EST_Cluster markers mapped to BGI version 2005-01 of Oryza_indica
    DS_6297                        EST_Cluster (Solanum)
    156,828 Solanum EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6298                        mRNA (Zea)
    155,243 Zea mRNA sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6299                        EST (Gossypium)
    278,670 Gossypium EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6300                        EST_Cluster (Medicago)
    183,672 Medicago EST_Cluster markers mapped to IGGP version 12X of Vitis_vinifera
    DS_6301                        EST_Cluster (Vitis)
    142,009 Vitis EST_Cluster markers mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6302                        EST (Mimulus)
    211,970 Mimulus EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6303                        EST (Triticum)
    626,347 Triticum EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6304                        EST (Mimulus)
    475,193 Mimulus EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6305                        GSS (Oryza_rufipogon)
    110,815 Oryza_rufipogon GSS sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6306                        EST (Solanum)
    228,987 Solanum EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6307                        EST_Cluster (Lactuca)
    114,037 Lactuca EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6308                        EST (Picea)
    114,242 Picea EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6309                        EST (Vitis)
    501,548 Vitis EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6310                        SNPs/Indels (Rice Diversity)
    SNPs/Indels (Rice Diversity)
    DS_6311                        EST (Populus)
    372,849 Populus EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6312                        EST (Gossypium)
    133,881 Gossypium EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6313                        EST_Cluster (Saccharum)
    245,228 Saccharum EST_Cluster markers mapped to MSU version 6 of Oryza_sativa
    DS_6314                        EST (Hordeum)
    206,481 Hordeum EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6315                        EST (Mimulus)
    310,632 Mimulus EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6316                        GSS (Oryza_glaberrima)
    204,379 Oryza_glaberrima GSS sequences mapped to MSU version 6 of Oryza_sativa
    DS_6317                        EST (Brassica)
    489,467 Brassica EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6318                        EST (Helianthus)
    171,311 Helianthus EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6319                        EST (Picea)
    248,304 Picea EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6320                        EST (Panicum)
    458,022 Panicum EST sequences mapped to BGI version 2005-01 of Oryza_indica
    DS_6321                        EST (Actinidia)
    111,972 Actinidia EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6322                        EST_Cluster (Oryza_sativa)
    208,283 Oryza_sativa EST_Cluster markers mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6323                        EST (Limnanthes)
    273,341 Limnanthes EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6324                        EST_Cluster (Malus)
    101,711 Malus EST_Cluster markers mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6325                        EST_Cluster (Saccharum)
    189,992 Saccharum EST_Cluster markers mapped to BGI version 2005-01 of Oryza_indica
    DS_6326                        EST (Arabidopsis)
    528,111 Arabidopsis EST sequences mapped to MSU version 6 of Oryza_sativa
    DS_6327                        EST (Cajanus)
    250,118 Cajanus EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6328                        EST (Lotus)
    136,266 Lotus EST sequences mapped to JGI version 2.0 of Populus_trichocarpa
    DS_6329                        Gramene Genes
    genes served up out of gramene
    DS_6330                        EST (Triticum)
    1,081,136 Triticum EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6331                        EST (Raphanus)
    509,271 Raphanus EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6332                        EST (Sorghum)
    231,614 Sorghum EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6333                        EST (Zea)
    343,215 Zea EST sequences mapped to Araly version 1 of Arabidopsis_lyrata
    DS_6334                        mRNA (Zea)
    115,299 Zea mRNA sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6335                        EST_Cluster (Zea)
    245,344 Zea EST_Cluster markers mapped to BGI version 2005-01 of Oryza_indica
    DS_6336                        EST (Panicum)
    459,704 Panicum EST sequences mapped to JGI version 1.4 of Sorghum_bicolor
    DS_6337                        EST (Liriodendron)
    100,515 Liriodendron EST sequences mapped to IGGP version 12X of Vitis_vinifera
    DS_6338                        EST (Citrus)
    667,231 Citrus EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6339                        EST (Theobroma)
    123,246 Theobroma EST sequences mapped to TAIR version 10 of Arabidopsis_thaliana
    DS_6340                        EST (Brassica)
    887,279 Brassica EST sequences mapped to IBI version 1.0 of Brachypodium_distachyon
    DS_6341                        Ailuropoda_melanoleuca.ailMel1.reference
    Ailuropoda_melanoleuca Reference server based on ailMel1 assembly. Contains 81467 top level entries.
    DS_6342                        Ailuropoda_melanoleuca.ailMel1.transcript
    Annotation source for Ailuropoda_melanoleuca transcript
    DS_6343                        Ailuropoda_melanoleuca.ailMel1.translation
    Annotation source for Ailuropoda_melanoleuca translation
    DS_6344                        Anolis_carolinensis.AnoCar2.0.reference
    Anolis_carolinensis Reference server based on AnoCar2.0 assembly. Contains 6457 top level entries.
    DS_6345                        Anolis_carolinensis.AnoCar2.0.transcript
    Annotation source for Anolis_carolinensis transcript
    DS_6346                        Anolis_carolinensis.AnoCar2.0.translation
    Annotation source for Anolis_carolinensis translation
    DS_6347                        Bos_taurus.UMD3.1.prediction_transcript
    Annotation source for Bos_taurus prediction_transcript
    DS_6348                        Bos_taurus.UMD3.1.reference
    Bos_taurus Reference server based on UMD3.1 assembly. Contains 3317 top level entries.
    DS_6349                        Bos_taurus.UMD3.1.transcript
    Annotation source for Bos_taurus transcript
    DS_6350                        Bos_taurus.UMD3.1.translation
    Annotation source for Bos_taurus translation
    DS_6351                        Caenorhabditis_elegans.WS220.reference
    Caenorhabditis_elegans Reference server based on WS220 assembly. Contains 7 top level entries.
    DS_6352                        Caenorhabditis_elegans.WS220.transcript
    Annotation source for Caenorhabditis_elegans transcript
    DS_6353                        Caenorhabditis_elegans.WS220.translation
    Annotation source for Caenorhabditis_elegans translation
    DS_6354                        Callithrix_jacchus.C_jacchus3.2.1.reference
    Callithrix_jacchus Reference server based on C_jacchus3.2.1 assembly. Contains 14205 top level entries.
    DS_6355                        Callithrix_jacchus.C_jacchus3.2.1.transcript
    Annotation source for Callithrix_jacchus transcript
    DS_6356                        Callithrix_jacchus.C_jacchus3.2.1.translation
    Annotation source for Callithrix_jacchus translation
    DS_6357                        Canis_familiaris.BROADD2.prediction_transcript
    Annotation source for Canis_familiaris prediction_transcript
    DS_6358                        Canis_familiaris.BROADD2.reference
    Canis_familiaris Reference server based on BROADD2 assembly. Contains 41 top level entries.
    DS_6359                        Canis_familiaris.BROADD2.transcript
    Annotation source for Canis_familiaris transcript
    DS_6360                        Canis_familiaris.BROADD2.translation
    Annotation source for Canis_familiaris translation
    DS_6361                        Cavia_porcellus.cavPor3.prediction_transcript
    Annotation source for Cavia_porcellus prediction_transcript
    DS_6362                        Cavia_porcellus.cavPor3.reference
    Cavia_porcellus Reference server based on cavPor3 assembly. Contains 3144 top level entries.
    DS_6363                        Cavia_porcellus.cavPor3.transcript
    Annotation source for Cavia_porcellus transcript
    DS_6364                        Cavia_porcellus.cavPor3.translation
    Annotation source for Cavia_porcellus translation
    DS_6365                        Choloepus_hoffmanni.choHof1.prediction_transcript
    Annotation source for Choloepus_hoffmanni prediction_transcript
    DS_6366                        Choloepus_hoffmanni.choHof1.reference
    Choloepus_hoffmanni Reference server based on choHof1 assembly. Contains 454510 top level entries.
    DS_6367                        Choloepus_hoffmanni.choHof1.transcript
    Annotation source for Choloepus_hoffmanni transcript
    DS_6368                        Choloepus_hoffmanni.choHof1.translation
    Annotation source for Choloepus_hoffmanni translation
    DS_6369                        Ciona_savignyi.CSAV2.0.prediction_transcript
    Annotation source for Ciona_savignyi prediction_transcript
    DS_6370                        Ciona_savignyi.CSAV2.0.reference
    Ciona_savignyi Reference server based on CSAV2.0 assembly. Contains 374 top level entries.
    DS_6371                        Ciona_savignyi.CSAV2.0.transcript
    Annotation source for Ciona_savignyi transcript
    DS_6372                        Ciona_savignyi.CSAV2.0.translation
    Annotation source for Ciona_savignyi translation
    DS_6373                        Danio_rerio.Zv9.prediction_transcript
    Annotation source for Danio_rerio prediction_transcript
    DS_6374                        Danio_rerio.Zv9.reference
    Danio_rerio Reference server based on Zv9 assembly. Contains 1133 top level entries.
    DS_6375                        Danio_rerio.Zv9.transcript
    Annotation source for Danio_rerio transcript
    DS_6376                        Danio_rerio.Zv9.translation
    Annotation source for Danio_rerio translation
    DS_6377                        Dasypus_novemcinctus.dasNov2.prediction_transcript
    Annotation source for Dasypus_novemcinctus prediction_transcript
    DS_6378                        Dasypus_novemcinctus.dasNov2.reference
    Dasypus_novemcinctus Reference server based on dasNov2 assembly. Contains 271554 top level entries.
    DS_6379                        Dasypus_novemcinctus.dasNov2.transcript
    Annotation source for Dasypus_novemcinctus transcript
    DS_6380                        Dasypus_novemcinctus.dasNov2.translation
    Annotation source for Dasypus_novemcinctus translation
    DS_6381                        Dipodomys_ordii.dipOrd1.prediction_transcript
    Annotation source for Dipodomys_ordii prediction_transcript
    DS_6382                        Dipodomys_ordii.dipOrd1.reference
    Dipodomys_ordii Reference server based on dipOrd1 assembly. Contains 195994 top level entries.
    DS_6383                        Dipodomys_ordii.dipOrd1.transcript
    Annotation source for Dipodomys_ordii transcript
    DS_6384                        Dipodomys_ordii.dipOrd1.translation
    Annotation source for Dipodomys_ordii translation
    DS_6385                        Drosophila_melanogaster.BDGP5.karyotype
    Annotation source for Drosophila_melanogaster karyotype
    DS_6386                        Drosophila_melanogaster.BDGP5.reference
    Drosophila_melanogaster Reference server based on BDGP5 assembly. Contains 15 top level entries.
    DS_6387                        Drosophila_melanogaster.BDGP5.transcript
    Annotation source for Drosophila_melanogaster transcript
    DS_6388                        Drosophila_melanogaster.BDGP5.translation
    Annotation source for Drosophila_melanogaster translation
    DS_6389                        Echinops_telfairi.TENREC.prediction_transcript
    Annotation source for Echinops_telfairi prediction_transcript
    DS_6390                        Echinops_telfairi.TENREC.reference
    Echinops_telfairi Reference server based on TENREC assembly. Contains 297967 top level entries.
    DS_6391                        Echinops_telfairi.TENREC.transcript
    Annotation source for Echinops_telfairi transcript
    DS_6392                        Echinops_telfairi.TENREC.translation
    Annotation source for Echinops_telfairi translation
    DS_6393                        Equus_caballus.EquCab2.prediction_transcript
    Annotation source for Equus_caballus prediction_transcript
    DS_6394                        Equus_caballus.EquCab2.reference
    Equus_caballus Reference server based on EquCab2 assembly. Contains 9636 top level entries.
    DS_6395                        Equus_caballus.EquCab2.transcript
    Annotation source for Equus_caballus transcript
    DS_6396                        Equus_caballus.EquCab2.translation
    Annotation source for Equus_caballus translation
    DS_6397                        Erinaceus_europaeus.HEDGEHOG.prediction_transcript
    Annotation source for Erinaceus_europaeus prediction_transcript
    DS_6398                        Erinaceus_europaeus.HEDGEHOG.reference
    Erinaceus_europaeus Reference server based on HEDGEHOG assembly. Contains 352700 top level entries.
    DS_6399                        Erinaceus_europaeus.HEDGEHOG.transcript
    Annotation source for Erinaceus_europaeus transcript
    DS_6400                        Erinaceus_europaeus.HEDGEHOG.translation
    Annotation source for Erinaceus_europaeus translation
    DS_6401                        Felis_catus.CAT.prediction_transcript
    Annotation source for Felis_catus prediction_transcript
    DS_6402                        Felis_catus.CAT.reference
    Felis_catus Reference server based on CAT assembly. Contains 202870 top level entries.
    DS_6403                        Felis_catus.CAT.transcript
    Annotation source for Felis_catus transcript
    DS_6404                        Felis_catus.CAT.translation
    Annotation source for Felis_catus translation
    DS_6405                        Gadus_morhua.gadMor1.prediction_transcript
    Annotation source for Gadus_morhua prediction_transcript
    DS_6406                        Gadus_morhua.gadMor1.reference
    Gadus_morhua Reference server based on gadMor1 assembly. Contains 398859 top level entries.
    DS_6407                        Gadus_morhua.gadMor1.transcript
    Annotation source for Gadus_morhua transcript
    DS_6408                        Gadus_morhua.gadMor1.translation
    Annotation source for Gadus_morhua translation
    DS_6409                        Gallus_gallus.WASHUC2.prediction_transcript
    Annotation source for Gallus_gallus prediction_transcript
    DS_6410                        Gallus_gallus.WASHUC2.reference
    Gallus_gallus Reference server based on WASHUC2 assembly. Contains 57 top level entries.
    DS_6411                        Gallus_gallus.WASHUC2.transcript
    Annotation source for Gallus_gallus transcript
    DS_6412                        Gallus_gallus.WASHUC2.translation
    Annotation source for Gallus_gallus translation
    DS_6413                        Gasterosteus_aculeatus.BROADS1.reference
    Gasterosteus_aculeatus Reference server based on BROADS1 assembly. Contains 1844 top level entries.
    DS_6414                        Gasterosteus_aculeatus.BROADS1.transcript
    Annotation source for Gasterosteus_aculeatus transcript
    DS_6415                        Gasterosteus_aculeatus.BROADS1.translation
    Annotation source for Gasterosteus_aculeatus translation
    DS_6416                        Gorilla_gorilla.gorGor3.1.prediction_transcript
    Annotation source for Gorilla_gorilla prediction_transcript
    DS_6417                        Gorilla_gorilla.gorGor3.1.reference
    Gorilla_gorilla Reference server based on gorGor3.1 assembly. Contains 27 top level entries.
    DS_6418                        Gorilla_gorilla.gorGor3.1.transcript
    Annotation source for Gorilla_gorilla transcript
    DS_6419                        Gorilla_gorilla.gorGor3.1.translation
    Annotation source for Gorilla_gorilla translation
    DS_6420                        Homo_sapiens.GRCh37.cagetags
    Annotation source for Homo_sapiens cagetags
    DS_6421                        Homo_sapiens.GRCh37.ditags
    Annotation source for Homo_sapiens ditags
    DS_6422                        Homo_sapiens.GRCh37.karyotype
    Annotation source for Homo_sapiens karyotype
    DS_6423                        Homo_sapiens.GRCh37.prediction_transcript
    Annotation source for Homo_sapiens prediction_transcript
    DS_6424                        Homo_sapiens.GRCh37.reference
    Homo_sapiens Reference server based on GRCh37 assembly. Contains 217 top level entries.
    DS_6425                        Homo_sapiens.GRCh37.transcript
    Annotation source for Homo_sapiens transcript
    DS_6426                        Latimeria_chalumnae.LatCha1.prediction_transcript
    Annotation source for Latimeria_chalumnae prediction_transcript
    DS_6427                        Latimeria_chalumnae.LatCha1.reference
    Latimeria_chalumnae Reference server based on LatCha1 assembly. Contains 22819 top level entries.
    DS_6428                        Latimeria_chalumnae.LatCha1.transcript
    Annotation source for Latimeria_chalumnae transcript
    DS_6429                        Latimeria_chalumnae.LatCha1.translation
    Annotation source for Latimeria_chalumnae translation
    DS_6430                        Loxodonta_africana.loxAfr3.prediction_transcript
    Annotation source for Loxodonta_africana prediction_transcript
    DS_6431                        Loxodonta_africana.loxAfr3.reference
    Loxodonta_africana Reference server based on loxAfr3 assembly. Contains 2353 top level entries.
    DS_6432                        Loxodonta_africana.loxAfr3.transcript
    Annotation source for Loxodonta_africana transcript
    DS_6433                        Loxodonta_africana.loxAfr3.translation
    Annotation source for Loxodonta_africana translation
    DS_6434                        Macaca_mulatta.MMUL_1.prediction_transcript
    Annotation source for Macaca_mulatta prediction_transcript
    DS_6435                        Macaca_mulatta.MMUL_1.reference
    Macaca_mulatta Reference server based on MMUL_1 assembly. Contains 121811 top level entries.
    DS_6436                        Macaca_mulatta.MMUL_1.transcript
    Annotation source for Macaca_mulatta transcript
    DS_6437                        Macaca_mulatta.MMUL_1.translation
    Annotation source for Macaca_mulatta translation
    DS_6438                        Macropus_eugenii.Meug_1.0.prediction_transcript
    Annotation source for Macropus_eugenii prediction_transcript
    DS_6439                        Macropus_eugenii.Meug_1.0.reference
    Macropus_eugenii Reference server based on Meug_1.0 assembly. Contains 582687 top level entries.
    DS_6440                        Macropus_eugenii.Meug_1.0.transcript
    Annotation source for Macropus_eugenii transcript
    DS_6441                        Macropus_eugenii.Meug_1.0.translation
    Annotation source for Macropus_eugenii translation
    DS_6442                        Meleagris_gallopavo.UMD2.prediction_transcript
    Annotation source for Meleagris_gallopavo prediction_transcript
    DS_6443                        Meleagris_gallopavo.UMD2.reference
    Meleagris_gallopavo Reference server based on UMD2 assembly. Contains 6166 top level entries.
    DS_6444                        Meleagris_gallopavo.UMD2.transcript
    Annotation source for Meleagris_gallopavo transcript
    DS_6445                        Meleagris_gallopavo.UMD2.translation
    Annotation source for Meleagris_gallopavo translation
    DS_6446                        Microcebus_murinus.micMur1.prediction_transcript
    Annotation source for Microcebus_murinus prediction_transcript
    DS_6447                        Microcebus_murinus.micMur1.reference
    Microcebus_murinus Reference server based on micMur1 assembly. Contains 172937 top level entries.
    DS_6448                        Microcebus_murinus.micMur1.transcript
    Annotation source for Microcebus_murinus transcript
    DS_6449                        Microcebus_murinus.micMur1.translation
    Annotation source for Microcebus_murinus translation
    DS_6450                        Monodelphis_domestica.BROADO5.reference
    Monodelphis_domestica Reference server based on BROADO5 assembly. Contains 11 top level entries.
    DS_6451                        Monodelphis_domestica.BROADO5.transcript
    Annotation source for Monodelphis_domestica transcript
    DS_6452                        Monodelphis_domestica.BROADO5.translation
    Annotation source for Monodelphis_domestica translation
    DS_6453                        Multi.Ensembl-GeneID.spine
    Gene Summary Annotation source
    DS_6454                        Mus_musculus.NCBIM37.cagetags
    Annotation source for Mus_musculus cagetags
    DS_6455                        Mus_musculus.NCBIM37.ditags
    Annotation source for Mus_musculus ditags
    DS_6456                        Mus_musculus.NCBIM37.karyotype
    Annotation source for Mus_musculus karyotype
    DS_6457                        Mus_musculus.NCBIM37.prediction_transcript
    Annotation source for Mus_musculus prediction_transcript
    DS_6458                        Mus_musculus.NCBIM37.reference
    Mus_musculus Reference server based on NCBIM37 assembly. Contains 211 top level entries.
    DS_6459                        Mus_musculus.NCBIM37.transcript
    Annotation source for Mus_musculus transcript
    DS_6460                        Myotis_lucifugus.Myoluc2.0.prediction_transcript
    Annotation source for Myotis_lucifugus prediction_transcript
    DS_6461                        Myotis_lucifugus.Myoluc2.0.reference
    Myotis_lucifugus Reference server based on Myoluc2.0 assembly. Contains 11654 top level entries.
    DS_6462                        Myotis_lucifugus.Myoluc2.0.transcript
    Annotation source for Myotis_lucifugus transcript
    DS_6463                        Myotis_lucifugus.Myoluc2.0.translation
    Annotation source for Myotis_lucifugus translation
    DS_6464                        Nomascus_leucogenys.Nleu1.0.prediction_transcript
    Annotation source for Nomascus_leucogenys prediction_transcript
    DS_6465                        Nomascus_leucogenys.Nleu1.0.reference
    Nomascus_leucogenys Reference server based on Nleu1.0 assembly. Contains 17968 top level entries.
    DS_6466                        Nomascus_leucogenys.Nleu1.0.transcript
    Annotation source for Nomascus_leucogenys transcript
    DS_6467                        Nomascus_leucogenys.Nleu1.0.translation
    Annotation source for Nomascus_leucogenys translation
    DS_6468                        Ochotona_princeps.pika.prediction_transcript
    Annotation source for Ochotona_princeps prediction_transcript
    DS_6469                        Ochotona_princeps.pika.reference
    Ochotona_princeps Reference server based on pika assembly. Contains 193095 top level entries.
    DS_6470                        Ochotona_princeps.pika.transcript
    Annotation source for Ochotona_princeps transcript
    DS_6471                        Ochotona_princeps.pika.translation
    Annotation source for Ochotona_princeps translation
    DS_6472                        Ornithorhynchus_anatinus.OANA5.reference
    Ornithorhynchus_anatinus Reference server based on OANA5 assembly. Contains 291092 top level entries.
    DS_6473                        Ornithorhynchus_anatinus.OANA5.transcript
    Annotation source for Ornithorhynchus_anatinus transcript
    DS_6474                        Ornithorhynchus_anatinus.OANA5.translation
    Annotation source for Ornithorhynchus_anatinus translation
    DS_6475                        Oryctolagus_cuniculus.oryCun2.reference
    Oryctolagus_cuniculus Reference server based on oryCun2 assembly. Contains 3242 top level entries.
    DS_6476                        Oryctolagus_cuniculus.oryCun2.transcript
    Annotation source for Oryctolagus_cuniculus transcript
    DS_6477                        Oryctolagus_cuniculus.oryCun2.translation
    Annotation source for Oryctolagus_cuniculus translation
    DS_6478                        Oryzias_latipes.MEDAKA1.ditags
    Annotation source for Oryzias_latipes ditags
    DS_6479                        Oryzias_latipes.MEDAKA1.prediction_transcript
    Annotation source for Oryzias_latipes prediction_transcript
    DS_6480                        Oryzias_latipes.MEDAKA1.reference
    Oryzias_latipes Reference server based on MEDAKA1 assembly. Contains 7188 top level entries.
    DS_6481                        Oryzias_latipes.MEDAKA1.transcript
    Annotation source for Oryzias_latipes transcript
    DS_6482                        Oryzias_latipes.MEDAKA1.translation
    Annotation source for Oryzias_latipes translation
    DS_6483                        Otolemur_garnettii.OtoGar3.prediction_transcript
    Annotation source for Otolemur_garnettii prediction_transcript
    DS_6484                        Otolemur_garnettii.OtoGar3.reference
    Otolemur_garnettii Reference server based on OtoGar3 assembly. Contains 7652 top level entries.
    DS_6485                        Otolemur_garnettii.OtoGar3.transcript
    Annotation source for Otolemur_garnettii transcript
    DS_6486                        Otolemur_garnettii.OtoGar3.translation
    Annotation source for Otolemur_garnettii translation
    DS_6487                        Pan_troglodytes.CHIMP2.1.4.prediction_transcript
    Annotation source for Pan_troglodytes prediction_transcript
    DS_6488                        Pan_troglodytes.CHIMP2.1.4.reference
    Pan_troglodytes Reference server based on CHIMP2.1.4 assembly. Contains 24128 top level entries.
    DS_6489                        Pan_troglodytes.CHIMP2.1.4.transcript
    Annotation source for Pan_troglodytes transcript
    DS_6490                        Pan_troglodytes.CHIMP2.1.4.translation
    Annotation source for Pan_troglodytes translation
    DS_6491                        Petromyzon_marinus.Pmarinus_7.0.reference
    Petromyzon_marinus Reference server based on Pmarinus_7.0 assembly. Contains 25005 top level entries.
    DS_6492                        Petromyzon_marinus.Pmarinus_7.0.transcript
    Annotation source for Petromyzon_marinus transcript
    DS_6493                        Petromyzon_marinus.Pmarinus_7.0.translation
    Annotation source for Petromyzon_marinus translation
    DS_6494                        Pongo_abelii.PPYG2.prediction_transcript
    Annotation source for Pongo_abelii prediction_transcript
    DS_6495                        Pongo_abelii.PPYG2.reference
    Pongo_abelii Reference server based on PPYG2 assembly. Contains 55 top level entries.
    DS_6496                        Pongo_abelii.PPYG2.transcript
    Annotation source for Pongo_abelii transcript
    DS_6497                        Pongo_abelii.PPYG2.translation
    Annotation source for Pongo_abelii translation
    DS_6498                        Procavia_capensis.proCap1.prediction_transcript
    Annotation source for Procavia_capensis prediction_transcript
    DS_6499                        Procavia_capensis.proCap1.reference
    Procavia_capensis Reference server based on proCap1 assembly. Contains 277109 top level entries.
    DS_6500                        Procavia_capensis.proCap1.transcript
    Annotation source for Procavia_capensis transcript
    DS_6501                        Procavia_capensis.proCap1.translation
    Annotation source for Procavia_capensis translation
    DS_6502                        Pteropus_vampyrus.pteVam1.prediction_transcript
    Annotation source for Pteropus_vampyrus prediction_transcript
    DS_6503                        Pteropus_vampyrus.pteVam1.reference
    Pteropus_vampyrus Reference server based on pteVam1 assembly. Contains 90637 top level entries.
    DS_6504                        Pteropus_vampyrus.pteVam1.transcript
    Annotation source for Pteropus_vampyrus transcript
    DS_6505                        Pteropus_vampyrus.pteVam1.translation
    Annotation source for Pteropus_vampyrus translation
    DS_6506                        Rattus_norvegicus.RGSC3.4.karyotype
    Annotation source for Rattus_norvegicus karyotype
    DS_6507                        Rattus_norvegicus.RGSC3.4.prediction_transcript
    Annotation source for Rattus_norvegicus prediction_transcript
    DS_6508                        Rattus_norvegicus.RGSC3.4.reference
    Rattus_norvegicus Reference server based on RGSC3.4 assembly. Contains 22 top level entries.
    DS_6509                        Rattus_norvegicus.RGSC3.4.transcript
    Annotation source for Rattus_norvegicus transcript
    DS_6510                        Rattus_norvegicus.RGSC3.4.translation
    Annotation source for Rattus_norvegicus translation
    DS_6511                        Saccharomyces_cerevisiae.EF4.reference
    Saccharomyces_cerevisiae Reference server based on EF4 assembly. Contains 17 top level entries.
    DS_6512                        Saccharomyces_cerevisiae.EF4.transcript
    Annotation source for Saccharomyces_cerevisiae transcript
    DS_6513                        Saccharomyces_cerevisiae.EF4.translation
    Annotation source for Saccharomyces_cerevisiae translation
    DS_6514                        Sarcophilus_harrisii.DEVIL7.0.reference
    Sarcophilus_harrisii Reference server based on DEVIL7.0 assembly. Contains 35975 top level entries.
    DS_6515                        Sarcophilus_harrisii.DEVIL7.0.transcript
    Annotation source for Sarcophilus_harrisii transcript
    DS_6516                        Sarcophilus_harrisii.DEVIL7.0.translation
    Annotation source for Sarcophilus_harrisii translation
    DS_6517                        Sorex_araneus.COMMON_SHREW1.prediction_transcript
    Annotation source for Sorex_araneus prediction_transcript
    DS_6518                        Sorex_araneus.COMMON_SHREW1.reference
    Sorex_araneus Reference server based on COMMON_SHREW1 assembly. Contains 243136 top level entries.
    DS_6519                        Sorex_araneus.COMMON_SHREW1.transcript
    Annotation source for Sorex_araneus transcript
    DS_6520                        Sorex_araneus.COMMON_SHREW1.translation
    Annotation source for Sorex_araneus translation
    DS_6521                        Spermophilus_tridecemlineatus.SQUIRREL.reference
    Spermophilus_tridecemlineatus Reference server based on SQUIRREL assembly. Contains 147878 top level entries.
    DS_6522                        Spermophilus_tridecemlineatus.SQUIRREL.transcript
    Annotation source for Spermophilus_tridecemlineatus transcript
    DS_6523                        Spermophilus_tridecemlineatus.SQUIRREL.translation
    Annotation source for Spermophilus_tridecemlineatus translation
    DS_6524                        Sus_scrofa.Sscrofa9.prediction_transcript
    Annotation source for Sus_scrofa prediction_transcript
    DS_6525                        Sus_scrofa.Sscrofa9.reference
    Sus_scrofa Reference server based on Sscrofa9 assembly. Contains 20 top level entries.
    DS_6526                        Sus_scrofa.Sscrofa9.transcript
    Annotation source for Sus_scrofa transcript
    DS_6527                        Sus_scrofa.Sscrofa9.translation
    Annotation source for Sus_scrofa translation
    DS_6528                        Taeniopygia_guttata.taeGut3.2.4.reference
    Taeniopygia_guttata Reference server based on taeGut3.2.4 assembly. Contains 69 top level entries.
    DS_6529                        Taeniopygia_guttata.taeGut3.2.4.transcript
    Annotation source for Taeniopygia_guttata transcript
    DS_6530                        Taeniopygia_guttata.taeGut3.2.4.translation
    Annotation source for Taeniopygia_guttata translation
    DS_6531                        Takifugu_rubripes.FUGU4.prediction_transcript
    Annotation source for Takifugu_rubripes prediction_transcript
    DS_6532                        Takifugu_rubripes.FUGU4.reference
    Takifugu_rubripes Reference server based on FUGU4 assembly. Contains 7214 top level entries.
    DS_6533                        Takifugu_rubripes.FUGU4.transcript
    Annotation source for Takifugu_rubripes transcript
    DS_6534                        Takifugu_rubripes.FUGU4.translation
    Annotation source for Takifugu_rubripes translation
    DS_6535                        Tarsius_syrichta.tarSyr1.prediction_transcript
    Annotation source for Tarsius_syrichta prediction_transcript
    DS_6536                        Tarsius_syrichta.tarSyr1.reference
    Tarsius_syrichta Reference server based on tarSyr1 assembly. Contains 631266 top level entries.
    DS_6537                        Tarsius_syrichta.tarSyr1.transcript
    Annotation source for Tarsius_syrichta transcript
    DS_6538                        Tarsius_syrichta.tarSyr1.translation
    Annotation source for Tarsius_syrichta translation
    DS_6539                        Tetraodon_nigroviridis.TETRAODON8.reference
    Tetraodon_nigroviridis Reference server based on TETRAODON8 assembly. Contains 27 top level entries.
    DS_6540                        Tetraodon_nigroviridis.TETRAODON8.transcript
    Annotation source for Tetraodon_nigroviridis transcript
    DS_6541                        Tetraodon_nigroviridis.TETRAODON8.translation
    Annotation source for Tetraodon_nigroviridis translation
    DS_6542                        Tupaia_belangeri.TREESHREW.prediction_transcript
    Annotation source for Tupaia_belangeri prediction_transcript
    DS_6543                        Tupaia_belangeri.TREESHREW.reference
    Tupaia_belangeri Reference server based on TREESHREW assembly. Contains 137753 top level entries.
    DS_6544                        Tupaia_belangeri.TREESHREW.transcript
    Annotation source for Tupaia_belangeri transcript
    DS_6545                        Tupaia_belangeri.TREESHREW.translation
    Annotation source for Tupaia_belangeri translation
    DS_6546                        Tursiops_truncatus.turTru1.prediction_transcript
    Annotation source for Tursiops_truncatus prediction_transcript
    DS_6547                        Tursiops_truncatus.turTru1.reference
    Tursiops_truncatus Reference server based on turTru1 assembly. Contains 111212 top level entries.
    DS_6548                        Tursiops_truncatus.turTru1.transcript
    Annotation source for Tursiops_truncatus transcript
    DS_6549                        Tursiops_truncatus.turTru1.translation
    Annotation source for Tursiops_truncatus translation
    DS_6550                        Vicugna_pacos.vicPac1.prediction_transcript
    Annotation source for Vicugna_pacos prediction_transcript
    DS_6551                        Vicugna_pacos.vicPac1.reference
    Vicugna_pacos Reference server based on vicPac1 assembly. Contains 290926 top level entries.
    DS_6552                        Vicugna_pacos.vicPac1.transcript
    Annotation source for Vicugna_pacos transcript
    DS_6553                        Vicugna_pacos.vicPac1.translation
    Annotation source for Vicugna_pacos translation
    DS_6554                        Xenopus_tropicalis.JGI_4.2.prediction_transcript
    Annotation source for Xenopus_tropicalis prediction_transcript
    DS_6555                        Xenopus_tropicalis.JGI_4.2.reference
    Xenopus_tropicalis Reference server based on JGI_4.2 assembly. Contains 19549 top level entries.
    DS_6556                        Xenopus_tropicalis.JGI_4.2.transcript
    Annotation source for Xenopus_tropicalis transcript
    DS_6557                        Xenopus_tropicalis.JGI_4.2.translation
    Annotation source for Xenopus_tropicalis translation
    DS_6558                        Ciona_intestinalis.JGI2.prediction_transcript
    Annotation source for Ciona_intestinalis prediction_transcript
    DS_6559                        Ciona_intestinalis.JGI2.reference
    Ciona_intestinalis Reference server based on JGI2 assembly. Contains 4390 top level entries.
    DS_6560                        Ciona_intestinalis.JGI2.transcript
    Annotation source for Ciona_intestinalis transcript
    DS_6561                        Ciona_intestinalis.JGI2.translation
    Annotation source for Ciona_intestinalis translation
    DS_6562                        Mus_musculus.NCBIM37.translation
    Annotation source for Mus_musculus translation
    DS_6563                        Bos_taurus.Btau_4.0.prediction_transcript
    Annotation source for Bos_taurus prediction_transcript
    DS_6564                        Bos_taurus.Btau_4.0.reference
    Bos_taurus Reference server based on Btau_4.0 assembly. Contains 12008 top level entries.
    DS_6565                        Bos_taurus.Btau_4.0.transcript
    Annotation source for Bos_taurus transcript
    DS_6566                        Bos_taurus.Btau_4.0.translation
    Annotation source for Bos_taurus translation
    DS_6567                        Drosophila_melanogaster.BDGP5.25.karyotype
    Annotation source for Drosophila_melanogaster karyotype
    DS_6568                        Drosophila_melanogaster.BDGP5.25.reference
    Drosophila_melanogaster Reference server based on BDGP5.25 assembly. Contains 15 top level entries.
    DS_6569                        Drosophila_melanogaster.BDGP5.25.transcript
    Annotation source for Drosophila_melanogaster transcript
    DS_6570                        Drosophila_melanogaster.BDGP5.25.translation
    Annotation source for Drosophila_melanogaster translation
    DS_6571                        Gorilla_gorilla.gorGor3.prediction_transcript
    Annotation source for Gorilla_gorilla prediction_transcript
    DS_6572                        Gorilla_gorilla.gorGor3.reference
    Gorilla_gorilla Reference server based on gorGor3 assembly. Contains 50196 top level entries.
    DS_6573                        Gorilla_gorilla.gorGor3.transcript
    Annotation source for Gorilla_gorilla transcript
    DS_6574                        Gorilla_gorilla.gorGor3.translation
    Annotation source for Gorilla_gorilla translation
    DS_6575                        Homo_sapiens.GRCh37.translation
    Annotation source for Homo_sapiens translation
    DS_6576                        Otolemur_garnettii.BUSHBABY1.prediction_transcript
    Annotation source for Otolemur_garnettii prediction_transcript
    DS_6577                        Otolemur_garnettii.BUSHBABY1.reference
    Otolemur_garnettii Reference server based on BUSHBABY1 assembly. Contains 107969 top level entries.
    DS_6578                        Otolemur_garnettii.BUSHBABY1.transcript
    Annotation source for Otolemur_garnettii transcript
    DS_6579                        Otolemur_garnettii.BUSHBABY1.translation
    Annotation source for Otolemur_garnettii translation
    DS_6580                        Pan_troglodytes.CHIMP2.1.prediction_transcript
    Annotation source for Pan_troglodytes prediction_transcript
    DS_6581                        Pan_troglodytes.CHIMP2.1.reference
    Pan_troglodytes Reference server based on CHIMP2.1 assembly. Contains 52 top level entries.
    DS_6582                        Pan_troglodytes.CHIMP2.1.transcript
    Annotation source for Pan_troglodytes transcript
    DS_6583                        Pan_troglodytes.CHIMP2.1.translation
    Annotation source for Pan_troglodytes translation
    DS_6584                        Saccharomyces_cerevisiae.EF3.reference
    Saccharomyces_cerevisiae Reference server based on EF3 assembly. Contains 18 top level entries.
    DS_6585                        Saccharomyces_cerevisiae.EF3.transcript
    Annotation source for Saccharomyces_cerevisiae transcript
    DS_6586                        Saccharomyces_cerevisiae.EF3.translation
    Annotation source for Saccharomyces_cerevisiae translation
    DS_6587                        Myotis_lucifugus.MICROBAT1.prediction_transcript
    Annotation source for Myotis_lucifugus prediction_transcript
    DS_6588                        Myotis_lucifugus.MICROBAT1.reference
    Myotis_lucifugus Reference server based on MICROBAT1 assembly. Contains 178934 top level entries.
    DS_6589                        Myotis_lucifugus.MICROBAT1.transcript
    Annotation source for Myotis_lucifugus transcript
    DS_6590                        Myotis_lucifugus.MICROBAT1.translation
    Annotation source for Myotis_lucifugus translation
    DS_6591                        Saccharomyces_cerevisiae.EF2.reference
    Saccharomyces_cerevisiae Reference server based on EF2 assembly. Contains 18 top level entries.
    DS_6592                        Saccharomyces_cerevisiae.EF2.transcript
    Annotation source for Saccharomyces_cerevisiae transcript
    DS_6593                        Saccharomyces_cerevisiae.EF2.translation
    Annotation source for Saccharomyces_cerevisiae translation
    DS_6594                        Pongo_pygmaeus.PPYG2.prediction_transcript
    Annotation source for Pongo_pygmaeus prediction_transcript
    DS_6595                        Pongo_pygmaeus.PPYG2.reference
    Pongo_pygmaeus Reference server based on PPYG2 assembly. Contains 55 top level entries.
    DS_6596                        Pongo_pygmaeus.PPYG2.transcript
    Annotation source for Pongo_pygmaeus transcript
    DS_6597                        Pongo_pygmaeus.PPYG2.translation
    Annotation source for Pongo_pygmaeus translation
    DS_6598                        Xenopus_tropicalis.JGI4.1.prediction_transcript
    Annotation source for Xenopus_tropicalis prediction_transcript
    DS_6599                        Xenopus_tropicalis.JGI4.1.reference
    Xenopus_tropicalis Reference server based on JGI4.1 assembly. Contains 19501 top level entries.
    DS_6600                        Xenopus_tropicalis.JGI4.1.transcript
    Annotation source for Xenopus_tropicalis transcript
    DS_6601                        Xenopus_tropicalis.JGI4.1.translation
    Annotation source for Xenopus_tropicalis translation
    DS_6602                        Anolis_carolinensis.AnoCar1.0.reference
    Anolis_carolinensis Reference server based on AnoCar1.0 assembly. Contains 7233 top level entries.
    DS_6603                        Anolis_carolinensis.AnoCar1.0.transcript
    Annotation source for Anolis_carolinensis transcript
    DS_6604                        Anolis_carolinensis.AnoCar1.0.translation
    Annotation source for Anolis_carolinensis translation
    DS_6605                        Caenorhabditis_elegans.WS210.reference
    Caenorhabditis_elegans Reference server based on WS210 assembly. Contains 7 top level entries.
    DS_6606                        Caenorhabditis_elegans.WS210.transcript
    Annotation source for Caenorhabditis_elegans transcript
    DS_6607                        Caenorhabditis_elegans.WS210.translation
    Annotation source for Caenorhabditis_elegans translation
    DS_6608                        Danio_rerio.Zv8.prediction_transcript
    Annotation source for Danio_rerio prediction_transcript
    DS_6609                        Danio_rerio.Zv8.reference
    Danio_rerio Reference server based on Zv8 assembly. Contains 11624 top level entries.
    DS_6610                        Danio_rerio.Zv8.transcript
    Annotation source for Danio_rerio transcript
    DS_6611                        Danio_rerio.Zv8.translation
    Annotation source for Danio_rerio translation
    DS_6612                        Bos_taurus.Btau_4.0.constrained_element
    Annotation source for Bos_taurus constrained_element
    DS_6613                        Canis_familiaris.BROADD2.constrained_element
    Annotation source for Canis_familiaris constrained_element
    DS_6614                        Cavia_porcellus.cavPor3.constrained_element
    Annotation source for Cavia_porcellus constrained_element
    DS_6615                        Choloepus_hoffmanni.choHof1.constrained_element
    Annotation source for Choloepus_hoffmanni constrained_element
    DS_6616                        Danio_rerio.Zv8.constrained_element
    Annotation source for Danio_rerio constrained_element
    DS_6617                        Dasypus_novemcinctus.dasNov2.constrained_element
    Annotation source for Dasypus_novemcinctus constrained_element
    DS_6618                        Dipodomys_ordii.dipOrd1.constrained_element
    Annotation source for Dipodomys_ordii constrained_element
    DS_6619                        Drosophila_melanogaster.BDGP5.13.karyotype
    Annotation source for Drosophila_melanogaster karyotype
    DS_6620                        Drosophila_melanogaster.BDGP5.13.reference
    Drosophila_melanogaster Reference server based on BDGP5.13 assembly. Contains 15 top level entries.
    DS_6621                        Drosophila_melanogaster.BDGP5.13.transcript
    Annotation source for Drosophila_melanogaster transcript
    DS_6622                        Drosophila_melanogaster.BDGP5.13.translation
    Annotation source for Drosophila_melanogaster translation
    DS_6623                        Echinops_telfairi.TENREC.constrained_element
    Annotation source for Echinops_telfairi constrained_element
    DS_6624                        Equus_caballus.EquCab2.constrained_element
    Annotation source for Equus_caballus constrained_element
    DS_6625                        Erinaceus_europaeus.HEDGEHOG.constrained_element
    Annotation source for Erinaceus_europaeus constrained_element
    DS_6626                        Felis_catus.CAT.constrained_element
    Annotation source for Felis_catus constrained_element
    DS_6627                        Gallus_gallus.WASHUC2.constrained_element
    Annotation source for Gallus_gallus constrained_element
    DS_6628                        Gasterosteus_aculeatus.BROADS1.constrained_element
    Annotation source for Gasterosteus_aculeatus constrained_element
    DS_6629                        Gorilla_gorilla.gorGor3.constrained_element
    Annotation source for Gorilla_gorilla constrained_element
    DS_6630                        Homo_sapiens.GRCh37.constrained_element
    Annotation source for Homo_sapiens constrained_element
    DS_6631                        Loxodonta_africana.loxAfr3.constrained_element
    Annotation source for Loxodonta_africana constrained_element
    DS_6632                        Macaca_mulatta.MMUL_1.constrained_element
    Annotation source for Macaca_mulatta constrained_element
    DS_6633                        Microcebus_murinus.micMur1.constrained_element
    Annotation source for Microcebus_murinus constrained_element
    DS_6634                        Monodelphis_domestica.BROADO5.constrained_element
    Annotation source for Monodelphis_domestica constrained_element
    DS_6635                        Mus_musculus.NCBIM37.constrained_element
    Annotation source for Mus_musculus constrained_element
    DS_6636                        Myotis_lucifugus.MICROBAT1.constrained_element
    Annotation source for Myotis_lucifugus constrained_element
    DS_6637                        Ochotona_princeps.pika.constrained_element
    Annotation source for Ochotona_princeps constrained_element
    DS_6638                        Ornithorhynchus_anatinus.OANA5.constrained_element
    Annotation source for Ornithorhynchus_anatinus constrained_element
    DS_6639                        Oryctolagus_cuniculus.oryCun2.constrained_element
    Annotation source for Oryctolagus_cuniculus constrained_element
    DS_6640                        Oryzias_latipes.MEDAKA1.constrained_element
    Annotation source for Oryzias_latipes constrained_element
    DS_6641                        Otolemur_garnettii.BUSHBABY1.constrained_element
    Annotation source for Otolemur_garnettii constrained_element
    DS_6642                        Pan_troglodytes.CHIMP2.1.constrained_element
    Annotation source for Pan_troglodytes constrained_element
    DS_6643                        Pongo_pygmaeus.PPYG2.constrained_element
    Annotation source for Pongo_pygmaeus constrained_element
    DS_6644                        Procavia_capensis.proCap1.constrained_element
    Annotation source for Procavia_capensis constrained_element
    DS_6645                        Pteropus_vampyrus.pteVam1.constrained_element
    Annotation source for Pteropus_vampyrus constrained_element
    DS_6646                        Rattus_norvegicus.RGSC3.4.constrained_element
    Annotation source for Rattus_norvegicus constrained_element
    DS_6647                        Saccharomyces_cerevisiae.SGD1.01.reference
    Saccharomyces_cerevisiae Reference server based on SGD1.01 assembly. Contains 18 top level entries.
    DS_6648                        Saccharomyces_cerevisiae.SGD1.01.transcript
    Annotation source for Saccharomyces_cerevisiae transcript
    DS_6649                        Saccharomyces_cerevisiae.SGD1.01.translation
    Annotation source for Saccharomyces_cerevisiae translation
    DS_6650                        Sorex_araneus.COMMON_SHREW1.constrained_element
    Annotation source for Sorex_araneus constrained_element
    DS_6651                        Sus_scrofa.Sscrofa9.constrained_element
    Annotation source for Sus_scrofa constrained_element
    DS_6652                        Takifugu_rubripes.FUGU4.constrained_element
    Annotation source for Takifugu_rubripes constrained_element
    DS_6653                        Tarsius_syrichta.tarSyr1.constrained_element
    Annotation source for Tarsius_syrichta constrained_element
    DS_6654                        Tupaia_belangeri.TREESHREW.constrained_element
    Annotation source for Tupaia_belangeri constrained_element
    DS_6655                        Tursiops_truncatus.turTru1.constrained_element
    Annotation source for Tursiops_truncatus constrained_element
    DS_6656                        Vicugna_pacos.vicPac1.constrained_element
    Annotation source for Vicugna_pacos constrained_element
    DS_6657                        Caenorhabditis_elegans.WS200.reference
    Caenorhabditis_elegans Reference server based on WS200 assembly. Contains 7 top level entries.
    DS_6658                        Caenorhabditis_elegans.WS200.transcript
    Annotation source for Caenorhabditis_elegans transcript
    DS_6659                        Caenorhabditis_elegans.WS200.translation
    Annotation source for Caenorhabditis_elegans translation
    DS_6660                        Callithrix_jacchus.calJac3.prediction_transcript
    Annotation source for Callithrix_jacchus prediction_transcript
    DS_6661                        Callithrix_jacchus.calJac3.reference
    Callithrix_jacchus Reference server based on calJac3 assembly. Contains 16089 top level entries.
    DS_6662                        Callithrix_jacchus.calJac3.transcript
    Annotation source for Callithrix_jacchus transcript
    DS_6663                        Callithrix_jacchus.calJac3.translation
    Annotation source for Callithrix_jacchus translation
    DS_6664                        Gorilla_gorilla.gorGor1.prediction_transcript
    Annotation source for Gorilla_gorilla prediction_transcript
    DS_6665                        Gorilla_gorilla.gorGor1.reference
    Gorilla_gorilla Reference server based on gorGor1 assembly. Contains 572749 top level entries.
    DS_6666                        Gorilla_gorilla.gorGor1.transcript
    Annotation source for Gorilla_gorilla transcript
    DS_6667                        Gorilla_gorilla.gorGor1.translation
    Annotation source for Gorilla_gorilla translation
    DS_6668                        Loxodonta_africana.loxAfr2.prediction_transcript
    Annotation source for Loxodonta_africana prediction_transcript
    DS_6669                        Loxodonta_africana.loxAfr2.reference
    Loxodonta_africana Reference server based on loxAfr2 assembly. Contains 207608 top level entries.
    DS_6670                        Loxodonta_africana.loxAfr2.transcript
    Annotation source for Loxodonta_africana transcript
    DS_6671                        Loxodonta_africana.loxAfr2.translation
    Annotation source for Loxodonta_africana translation
    DS_6672                        Oryctolagus_cuniculus.RABBIT.prediction_transcript
    Annotation source for Oryctolagus_cuniculus prediction_transcript
    DS_6673                        Oryctolagus_cuniculus.RABBIT.reference
    Oryctolagus_cuniculus Reference server based on RABBIT assembly. Contains 196698 top level entries.
    DS_6674                        Oryctolagus_cuniculus.RABBIT.transcript
    Annotation source for Oryctolagus_cuniculus transcript
    DS_6675                        Oryctolagus_cuniculus.RABBIT.translation
    Annotation source for Oryctolagus_cuniculus translation
    DS_6676                        Aedes_aegypti.AaegL1.reference
    Aedes_aegypti Reference server based on AaegL1 assembly. Contains 4758 top level entries.
    DS_6677                        Aedes_aegypti.AaegL1.transcript
    Annotation source for Aedes_aegypti transcript
    DS_6678                        Aedes_aegypti.AaegL1.translation
    Annotation source for Aedes_aegypti translation
    DS_6679                        Anopheles_gambiae.AgamP3.karyotype
    Annotation source for Anopheles_gambiae karyotype
    DS_6680                        Anopheles_gambiae.AgamP3.prediction_transcript
    Annotation source for Anopheles_gambiae prediction_transcript
    DS_6681                        Anopheles_gambiae.AgamP3.reference
    Anopheles_gambiae Reference server based on AgamP3 assembly. Contains 173 top level entries.
    DS_6682                        Anopheles_gambiae.AgamP3.transcript
    Annotation source for Anopheles_gambiae transcript
    DS_6683                        Anopheles_gambiae.AgamP3.translation
    Annotation source for Anopheles_gambiae translation
    DS_6684                        Drosophila_melanogaster.BDGP5.4.karyotype
    Annotation source for Drosophila_melanogaster karyotype
    DS_6685                        Drosophila_melanogaster.BDGP5.4.reference
    Drosophila_melanogaster Reference server based on BDGP5.4 assembly. Contains 15 top level entries.
    DS_6686                        Drosophila_melanogaster.BDGP5.4.transcript
    Annotation source for Drosophila_melanogaster transcript
    DS_6687                        Drosophila_melanogaster.BDGP5.4.translation
    Annotation source for Drosophila_melanogaster translation
    DS_6688                        Caenorhabditis_elegans.WS190.reference
    Caenorhabditis_elegans Reference server based on WS190 assembly. Contains 7 top level entries.
    DS_6689                        Caenorhabditis_elegans.WS190.transcript
    Annotation source for Caenorhabditis_elegans transcript
    DS_6690                        Caenorhabditis_elegans.WS190.translation
    Annotation source for Caenorhabditis_elegans translation
    DS_6691                        Homo_sapiens.NCBI36.cagetags
    Annotation source for Homo_sapiens cagetags
    DS_6692                        Homo_sapiens.NCBI36.ditags
    Annotation source for Homo_sapiens ditags
    DS_6693                        Homo_sapiens.NCBI36.karyotype
    Annotation source for Homo_sapiens karyotype
    DS_6694                        Homo_sapiens.NCBI36.prediction_transcript
    Annotation source for Homo_sapiens prediction_transcript
    DS_6695                        Homo_sapiens.NCBI36.reference
    Homo_sapiens Reference server based on NCBI36 assembly. Contains 117 top level entries.
    DS_6696                        Homo_sapiens.NCBI36.transcript
    Annotation source for Homo_sapiens transcript
    DS_6697                        Homo_sapiens.NCBI36.translation
    Annotation source for Homo_sapiens translation
    DS_6698                        Danio_rerio.ZFISH7.prediction_transcript
    Annotation source for Danio_rerio prediction_transcript
    DS_6699                        Danio_rerio.ZFISH7.reference
    Danio_rerio Reference server based on ZFISH7 assembly. Contains 5036 top level entries.
    DS_6700                        Danio_rerio.ZFISH7.transcript
    Annotation source for Danio_rerio transcript
    DS_6701                        Danio_rerio.ZFISH7.translation
    Annotation source for Danio_rerio translation
    DS_6702                        Acyrthosiphon_pisum.Acyr2.reference
    Acyrthosiphon_pisum Reference server based on Acyr2 assembly. Contains 22798 top level entries.
    DS_6703                        Acyrthosiphon_pisum.Acyr2.transcript
    Annotation source for Acyrthosiphon_pisum transcript
    DS_6704                        Acyrthosiphon_pisum.Acyr2.translation
    Annotation source for Acyrthosiphon_pisum translation
    DS_6705                        Amphimedon_queenslandica.Aqu1.reference
    Amphimedon_queenslandica Reference server based on Aqu1 assembly. Contains 13397 top level entries.
    DS_6706                        Amphimedon_queenslandica.Aqu1.transcript
    Annotation source for Amphimedon_queenslandica transcript
    DS_6707                        Amphimedon_queenslandica.Aqu1.translation
    Annotation source for Amphimedon_queenslandica translation
    DS_6708                        Atta_cephalotes.Acep1.reference
    Atta_cephalotes Reference server based on Acep1 assembly. Contains 2835 top level entries.
    DS_6709                        Atta_cephalotes.Acep1.transcript
    Annotation source for Atta_cephalotes transcript
    DS_6710                        Atta_cephalotes.Acep1.translation
    Annotation source for Atta_cephalotes translation
    DS_6711                        Bombyx_mori.Bmor1.reference
    Bombyx_mori Reference server based on Bmor1 assembly. Contains 43622 top level entries.
    DS_6712                        Bombyx_mori.Bmor1.transcript
    Annotation source for Bombyx_mori transcript
    DS_6713                        Bombyx_mori.Bmor1.translation
    Annotation source for Bombyx_mori translation
    DS_6714                        Daphnia_pulex.Dappu1.reference
    Daphnia_pulex Reference server based on Dappu1 assembly. Contains 5191 top level entries.
    DS_6715                        Daphnia_pulex.Dappu1.transcript
    Annotation source for Daphnia_pulex transcript
    DS_6716                        Daphnia_pulex.Dappu1.translation
    Annotation source for Daphnia_pulex translation
    DS_6717                        Multi.Ensembl-GeneID.spine
    Gene Summary Annotation source
    DS_6718                        Nematostella_vectensis.Nemve1.reference
    Nematostella_vectensis Reference server based on Nemve1 assembly. Contains 10804 top level entries.
    DS_6719                        Nematostella_vectensis.Nemve1.transcript
    Annotation source for Nematostella_vectensis transcript
    DS_6720                        Nematostella_vectensis.Nemve1.translation
    Annotation source for Nematostella_vectensis translation
    DS_6721                        Pristionchus_pacificus.pp1.reference
    Pristionchus_pacificus Reference server based on pp1 assembly. Contains 5106 top level entries.
    DS_6722                        Pristionchus_pacificus.pp1.transcript
    Annotation source for Pristionchus_pacificus transcript
    DS_6723                        Pristionchus_pacificus.pp1.translation
    Annotation source for Pristionchus_pacificus translation
    DS_6724                        Schistosoma_mansoni.sma_v3.1.reference
    Schistosoma_mansoni Reference server based on sma_v3.1 assembly. Contains 19022 top level entries.
    DS_6725                        Schistosoma_mansoni.sma_v3.1.transcript
    Annotation source for Schistosoma_mansoni transcript
    DS_6726                        Schistosoma_mansoni.sma_v3.1.translation
    Annotation source for Schistosoma_mansoni translation
    DS_6727                        Strongylocentrotus_purpuratus.Spur2.5.reference
    Strongylocentrotus_purpuratus Reference server based on Spur2.5 assembly. Contains 77726 top level entries.
    DS_6728                        Strongylocentrotus_purpuratus.Spur2.5.transcript
    Annotation source for Strongylocentrotus_purpuratus transcript
    DS_6729                        Strongylocentrotus_purpuratus.Spur2.5.translation
    Annotation source for Strongylocentrotus_purpuratus translation
    DS_6730                        Tribolium_castaneum.Tcas3.reference
    Tribolium_castaneum Reference server based on Tcas3 assembly. Contains 11 top level entries.
    DS_6731                        Tribolium_castaneum.Tcas3.transcript
    Annotation source for Tribolium_castaneum transcript
    DS_6732                        Tribolium_castaneum.Tcas3.translation
    Annotation source for Tribolium_castaneum translation
    DS_6733                        Trichinella_spiralis.Tspiralis1.reference
    Trichinella_spiralis Reference server based on Tspiralis1 assembly. Contains 6863 top level entries.
    DS_6734                        Trichinella_spiralis.Tspiralis1.transcript
    Annotation source for Trichinella_spiralis transcript
    DS_6735                        Trichinella_spiralis.Tspiralis1.translation
    Annotation source for Trichinella_spiralis translation
    DS_6736                        Trichoplax_adhaerens.TRIAD1.reference
    Trichoplax_adhaerens Reference server based on TRIAD1 assembly. Contains 1415 top level entries.
    DS_6737                        Trichoplax_adhaerens.TRIAD1.transcript
    Annotation source for Trichoplax_adhaerens transcript
    DS_6738                        Trichoplax_adhaerens.TRIAD1.translation
    Annotation source for Trichoplax_adhaerens translation

Go to the output files for this example

## Command line arguments

    Generate server cache file for DAS servers or for the DAS registry
    Version: EMBOSS:6.5.6.0

       Standard (Mandatory) qualifiers:
      [-cachefile]         outfile    [server.$(servername)] Server cache output
                                      file

       Additional (Optional) qualifiers:
       -sequencesourcesonly boolean    [N] Display DAS sequence sources only
       -outfile            outfile    [stdout] Output file name

       Advanced (Unprompted) qualifiers:
       -host               string     [www.dasregistry.org] DAS registry/server
                                      host location (Any string)
       -path               string     [/das] DAS registry/server path on
                                      registry/server host (Any string)
       -port               integer    [80] DAS registry/server port on
                                      registry/server host (Any integer value)
       -servername         string     [das] Name of a DAS server defined in EMBOSS
                                      resource files (Any string)

       Associated qualifiers:

       "-outfile" associated qualifiers
       -odirectory         string     Output directory

       "-cachefile" associated qualifiers
       -odirectory1        string     Output directory

       General qualifiers:
       -auto               boolean    Turn off prompts
       -stdout             boolean    Write first file to standard output
       -filter             boolean    Read first file from standard input, write
                                      first file to standard output
       -options            boolean    Prompt for standard and additional values
       -debug              boolean    Write debug output to program.dbg
       -verbose            boolean    Report some/full command line options
       -help               boolean    Report command line options and exit. More
                                      information on associated and general
                                      qualifiers can be found with -help -verbose
       -warning            boolean    Report warnings
       -error              boolean    Report errors
       -fatal              boolean    Report fatal errors
       -die                boolean    Report dying program messages
       -version            boolean    Report version number and exit

Qualifier | Type | Description | Allowed values | Default
--- | --- | --- | --- | ---
Standard (Mandatory) qualifiers
[-cachefile] (Parameter 1) | outfile | Server cache output file | Output file | server.$(servername)
Additional (Optional) qualifiers
-sequencesourcesonly | boolean | Display DAS sequence sources only | Boolean value Yes/No | No
-outfile | outfile | Output file name | Output file | stdout
Advanced (Unprompted) qualifiers
-host | string | DAS registry/server host location | Any string | www.dasregistry.org
-path | string | DAS registry/server path on registry/server host | Any string | /das
-port | integer | DAS registry/server port on registry/server host | Any integer value | 80
-servername | string | Name of a DAS server defined in EMBOSS resource files | Any string | das
Associated qualifiers
"-outfile" associated outfile qualifiers
-odirectory | string | Output directory | Any string |
"-cachefile" associated outfile qualifiers
-odirectory1 -odirectory_cachefile | string | Output directory | Any string |
General qualifiers
-auto | boolean | Turn off prompts | Boolean value Yes/No | N
-stdout | boolean | Write first file to standard output | Boolean value Yes/No | N
-filter | boolean | Read first file from standard input, write first file to standard output | Boolean value Yes/No | N
-options | boolean | Prompt for standard and additional values | Boolean value Yes/No | N
-debug | boolean | Write debug output to program.dbg | Boolean value Yes/No | N
-verbose | boolean | Report some/full command line options | Boolean value Yes/No | Y
-help | boolean | Report command line options and exit. More information on associated and general qualifiers can be found with -help -verbose | Boolean value Yes/No | N
-warning | boolean | Report warnings | Boolean value Yes/No | Y
-error | boolean | Report errors | Boolean value Yes/No | Y
-fatal | boolean | Report fatal errors | Boolean value Yes/No | Y
-die | boolean | Report dying program messages | Boolean value Yes/No | Y
-version | boolean | Report version number and exit | Boolean value Yes/No | N

## Input file format

cachedas contacts the DAS registry for details of registered servers.

## Output file format

cachedas writes a server cache file which can be saved in the user's .embossdata directory or, for a system administrator, stored in the site-wide share/EMBOSS/ directory.

### Output files for usage example

### File: qatests.server.dasregistry

    # qatests.server.dasregistry 2012-07-15 12:00:00

    DB DS_114_signalp [
      method: das
      type: "Protfeatures"
      format: "dasgff"
      url: http://das.cbs.dtu.dk:9000/das/signalp
      example: "P15498"
      comment: "SignalP (http://www.cbs.dtu.dk/services/SignalP) predictions for UniProt."
      hasaccession: "N"
      identifier: "segment"
      fields: "segment,type,category,categorize,feature_id"
    ]

    DB netphos [
      method: das
      type: "Protfeatures"
      format: "dasgff"
      url: http://das.cbs.dtu.dk:9000/das/netphos
      example: "P15498"
      comment: "NetPhos (http://www.cbs.dtu.dk/services/NetPhos) predictions for UniProt."
      hasaccession: "N"
      identifier: "segment"
      fields: "segment,type,category,categorize,feature_id"
    ]

    DB prop [
      method: das
      type: "Protfeatures"
      format: "dasgff"
      url: http://das.cbs.dtu.dk:9000/das/prop
      example: "P15498"
      comment: "ProP (http://www.cbs.dtu.dk/services/ProP) predictions for UniProt."
      hasaccession: "N"
      identifier: "segment"
      fields: "segment,type,category,categorize,feature_id"
    ]

    DB transmem_pred [
      method: das
      type: "Protfeatures"
      format: "dasgff"
      url: http://pongo.biocomp.unibo.it/das/dasdb
      example: "P15498"
      comment: "Membrane protein annotation. Presenty This DAS server contains UNIPROT and IPI human proteins. The annotation si done using 4 different predictors: TMHMM2.0, MEMSAT, ENSEMBLE_1.0 and PRODIV_TMHMM_0.91"
      hasaccession: "N"
      identifier: "segment"
      fields: "segment,type,category,categorize,feature_id"
    ]

      [Part of this file has been deleted for brevity]

      method: das
      type: "Nucfeatures"
      taxon: "6334"
      format: "dasgff"
      url: http://metazoa.ensembl.org/das/Trichinella_spiralis.Tspiralis1.translation
      example: ""
      comment: "Annotation source for Trichinella_spiralis translation"
      hasaccession: "N"
      identifier: "segment"
      fields: "segment,type,category,categorize,feature_id"
    ]

    DB Trichoplax_adhaerens_TRIAD1_reference [
      method: das
      type: "Nucleotide, Nucfeatures"
      taxon: "10228"
      format: "das, dasgff"
      url: http://metazoa.ensembl.org/das/Trichoplax_adhaerens.TRIAD1.reference
      example: ""
      comment: "Trichoplax_adhaerens Reference server based on TRIAD1 assembly. Contains 1415 top level entries."
      hasaccession: "N"
      identifier: "segment"
      fields: "segment,type,category,categorize,feature_id"
    ]

    DB Trichoplax_adhaerens_TRIAD1_transcript [
      method: das
      type: "Nucfeatures"
      taxon: "10228"
      format: "dasgff"
      url: http://metazoa.ensembl.org/das/Trichoplax_adhaerens.TRIAD1.transcript
      example: ""
      comment: "Annotation source for Trichoplax_adhaerens transcript"
      hasaccession: "N"
      identifier: "segment"
      fields: "segment,type,category,categorize,feature_id"
    ]

    DB Trichoplax_adhaerens_TRIAD1_translation [
      method: das
      type: "Nucfeatures"
      taxon: "10228"
      format: "dasgff"
      url: http://metazoa.ensembl.org/das/Trichoplax_adhaerens.TRIAD1.translation
      example: ""
      comment: "Annotation source for Trichoplax_adhaerens translation"
      hasaccession: "N"
      identifier: "segment"
      fields: "segment,type,category,categorize,feature_id"
    ]

## Data files

None.

## Notes

None.

## References

None.

## Warnings

None.

## Diagnostic Error Messages

None.

## Exit status

It always exits with status 0.

## Known bugs

None.

## See also

Program name | Description
--- | ---
cachedbfetch | Generate server cache file for Dbfetch/WSDbfetch data sources
cacheebeyesearch | Generate server cache file for EB-eye search domains
cacheensembl | Generate server cache file for an Ensembl server
dbtell | Display information about a public database
servertell | Display information about a public server
showdb | Display information on configured databases
showserver | Display information on configured servers

## Author(s)

Peter Rice
European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK

Please report all bugs to the EMBOSS bug team (emboss-bug © emboss.open-bio.org) not to the original author.

## History

## Target users

This program is intended to be used by everyone and everything, from naive users to embedded scripts.

## Comments

None