MANIFEST.in
README.rst
setup.cfg
setup.py
dreamtools/__init__.py
dreamtools.egg-info/PKG-INFO
dreamtools.egg-info/SOURCES.txt
dreamtools.egg-info/dependency_links.txt
dreamtools.egg-info/entry_points.txt
dreamtools.egg-info/not-zip-safe
dreamtools.egg-info/requires.txt
dreamtools.egg-info/top_level.txt
dreamtools/admin/__init__.py
dreamtools/admin/download_data.py
dreamtools/admin/release.py
dreamtools/core/README.rst
dreamtools/core/__init__.py
dreamtools/core/challenge.py
dreamtools/core/cindex.py
dreamtools/core/downloader.py
dreamtools/core/layout.py
dreamtools/core/rocs.py
dreamtools/core/rtools.py
dreamtools/core/sageutils.py
dreamtools/core/scoring.py
dreamtools/core/settings.py
dreamtools/core/wikitools.py
dreamtools/core/ziptools.py
dreamtools/dream10/README.rst
dreamtools/dream10/__init__.py
dreamtools/dream10/D10C1/__init__.py
dreamtools/dream10/D10C2/__init__.py
dreamtools/dream10/D10C3/__init__.py
dreamtools/dream2/README.rst
dreamtools/dream2/__init__.py
dreamtools/dream2/D2C1/README.rst
dreamtools/dream2/D2C1/__init__.py
dreamtools/dream2/D2C1/scoring.py
dreamtools/dream2/D2C1/data/BCL6_targets_and_decoys.xls
dreamtools/dream2/D2C1/data/FromNumbersToGeneNames.txt
dreamtools/dream2/D2C1/goldstandard/D2C1_goldstandard.tsv
dreamtools/dream2/D2C1/goldstandard/GoldStandard_with_AffyIds.xls
dreamtools/dream2/D2C1/leaderboard/D2C1_leaderboard.csv
dreamtools/dream2/D2C1/leaderboard/__init__.py
dreamtools/dream2/D2C1/templates/D2C1_template.tsv
dreamtools/dream2/D2C2/README.rst
dreamtools/dream2/D2C2/__init__.py
dreamtools/dream2/D2C2/scoring.py
dreamtools/dream2/D2C2/data/FromNumbersToGeneNames.txt
dreamtools/dream2/D2C2/data/INFO.txt
dreamtools/dream2/D2C2/data/Prot-Prot_Genes.xls
dreamtools/dream2/D2C2/goldstandard/D2C2_goldstandard.txt
dreamtools/dream2/D2C2/goldstandard/GoldStandard_ProtProtSubnet.txt
dreamtools/dream2/D2C2/leaderboard/D2C2_leaderboard.csv
dreamtools/dream2/D2C2/leaderboard/__init__.py
dreamtools/dream2/D2C2/templates/D2C2_template.txt
dreamtools/dream2/D2C3/README.rst
dreamtools/dream2/D2C3/__init__.py
dreamtools/dream2/D2C3/scoring.py
dreamtools/dream2/D2C3/data/FiveGene_chip.xls
dreamtools/dream2/D2C3/data/FiveGene_qPCR.xls
dreamtools/dream2/D2C3/data/INFO.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_DIRECTED-SIGNED_EXCITATORY_chip.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_DIRECTED-SIGNED_EXCITATORY_qPCR.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_DIRECTED-SIGNED_INHIBITORY_chip.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_DIRECTED-SIGNED_INHIBITORY_qPCR.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_DIRECTED-UNSIGNED_chip.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_DIRECTED-UNSIGNED_qPCR.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_UNDIRECTED-SIGNED_EXCITATORY_chip.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_UNDIRECTED-SIGNED_EXCITATORY_qPCR.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_UNDIRECTED-SIGNED_INHIBITORY_chip.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_UNDIRECTED-SIGNED_INHIBITORY_qPCR.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_UNDIRECTED-UNSIGNED_chip.txt
dreamtools/dream2/D2C3/goldstandard/D2C3_goldstandard_UNDIRECTED-UNSIGNED_qPCR.txt
dreamtools/dream2/D2C3/leaderboard/D2C3_leaderboard.csv
dreamtools/dream2/D2C3/leaderboard/__init__.py
dreamtools/dream2/D2C3/templates/D2C3_templates_DIRECTED-SIGNED_EXCITATORY_chip.txt
dreamtools/dream2/D2C3/templates/D2C3_templates_DIRECTED-SIGNED_EXCITATORY_qPCR.txt
dreamtools/dream2/D2C3/templates/D2C3_templates_DIRECTED-SIGNED_INHIBITORY_chip.txt
dreamtools/dream2/D2C3/templates/D2C3_templates_DIRECTED-SIGNED_INHIBITORY_qPCR.txt
dreamtools/dream2/D2C3/templates/D2C3_templates_DIRECTED-UNSIGNED_chip.txt
dreamtools/dream2/D2C3/templates/D2C3_templates_DIRECTED-UNSIGNED_qPCR.txt
dreamtools/dream2/D2C3/templates/D2C3_templates_UNDIRECTED-SIGNED_EXCITATORY_chip.txt
dreamtools/dream2/D2C3/templates/D2C3_templates_UNDIRECTED-SIGNED_EXCITATORY_qPCR.txt
dreamtools/dream2/D2C3/templates/D2C3_templates_UNDIRECTED-SIGNED_INHIBITORY_chip.txt
dreamtools/dream2/D2C3/templates/D2C3_templates_UNDIRECTED-SIGNED_INHIBITORY_qPCR.txt
dreamtools/dream2/D2C3/templates/D2C3_templates_UNDIRECTED-UNSIGNED_chip.txt
dreamtools/dream2/D2C3/templates/D2C3_templates_UNDIRECTED-UNSIGNED_qPCR.txt
dreamtools/dream2/D2C4/README.rst
dreamtools/dream2/D2C4/__init__.py
dreamtools/dream2/D2C4/scoring.py
dreamtools/dream2/D2C4/leaderboard/D2C4_leaderboard.csv
dreamtools/dream2/D2C4/leaderboard/__init__.py
dreamtools/dream2/D2C5/README.rst
dreamtools/dream2/D2C5/__init__.py
dreamtools/dream2/D2C5/scoring.py
dreamtools/dream2/D2C5/leaderboard/D2C5_leaderboard.csv
dreamtools/dream2/D2C5/leaderboard/__init__.py
dreamtools/dream3/__init__.py
dreamtools/dream3/D3C1/README.rst
dreamtools/dream3/D3C1/__init__.py
dreamtools/dream3/D3C1/scoring.py
dreamtools/dream3/D3C1/goldstandard/D3C1_goldstandard.txt
dreamtools/dream3/D3C1/templates/D3C1_template.txt
dreamtools/dream3/D3C2/README.rst
dreamtools/dream3/D3C2/__init__.py
dreamtools/dream3/D3C2/scoring.py
dreamtools/dream3/D3C2/goldstandard/D3C2_goldstandard_cytokine.txt
dreamtools/dream3/D3C2/goldstandard/D3C2_goldstandard_phospho.txt
dreamtools/dream3/D3C2/templates/D3C2_template_cytokine.txt
dreamtools/dream3/D3C2/templates/D3C2_template_phospho.txt
dreamtools/dream3/D3C3/README.rst
dreamtools/dream3/D3C3/__init__.py
dreamtools/dream3/D3C3/scoring.py
dreamtools/dream3/D3C3/goldstandard/D3C3_goldstandard.txt
dreamtools/dream3/D3C3/templates/D3C3_template.txt
dreamtools/dream3/D3C4/README.rst
dreamtools/dream3/D3C4/__init__.py
dreamtools/dream3/D3C4/scoring.py
dreamtools/dream3/D3C4/templates/example_InSilicoSize10_Ecoli1.txt
dreamtools/dream3/D3C4/templates/example_InSilicoSize10_Ecoli2.txt
dreamtools/dream3/D3C4/templates/example_InSilicoSize10_Yeast1.txt
dreamtools/dream3/D3C4/templates/example_InSilicoSize10_Yeast2.txt
dreamtools/dream3/D3C4/templates/example_InSilicoSize10_Yeast3.txt
dreamtools/dream4/__init__.py
dreamtools/dream4/D4C1/README.rst
dreamtools/dream4/D4C1/__init__.py
dreamtools/dream4/D4C1/scoring.py
dreamtools/dream4/D4C1/goldstandard/D4C1_goldstandard.txt
dreamtools/dream4/D4C1/goldstandard/README.rst
dreamtools/dream4/D4C1/templates/D4C1_templates.txt
dreamtools/dream4/D4C2/README.rst
dreamtools/dream4/D4C2/__init__.py
dreamtools/dream4/D4C2/scoring.py
dreamtools/dream4/D4C2/goldstandard/10/DREAM4_GoldStandard_InSilico_Size10_1.tsv
dreamtools/dream4/D4C2/goldstandard/10/DREAM4_GoldStandard_InSilico_Size10_2.tsv
dreamtools/dream4/D4C2/goldstandard/10/DREAM4_GoldStandard_InSilico_Size10_3.tsv
dreamtools/dream4/D4C2/goldstandard/10/DREAM4_GoldStandard_InSilico_Size10_4.tsv
dreamtools/dream4/D4C2/goldstandard/10/DREAM4_GoldStandard_InSilico_Size10_5.tsv
dreamtools/dream4/D4C2/goldstandard/100/DREAM4_GoldStandard_InSilico_Size100_1.tsv
dreamtools/dream4/D4C2/goldstandard/100/DREAM4_GoldStandard_InSilico_Size100_2.tsv
dreamtools/dream4/D4C2/goldstandard/100/DREAM4_GoldStandard_InSilico_Size100_3.tsv
dreamtools/dream4/D4C2/goldstandard/100/DREAM4_GoldStandard_InSilico_Size100_4.tsv
dreamtools/dream4/D4C2/goldstandard/100/DREAM4_GoldStandard_InSilico_Size100_5.tsv
dreamtools/dream4/D4C2/goldstandard/100_multifactorial/DREAM4_GoldStandard_InSilico_Size100_multifactorial_1.tsv
dreamtools/dream4/D4C2/goldstandard/100_multifactorial/DREAM4_GoldStandard_InSilico_Size100_multifactorial_2.tsv
dreamtools/dream4/D4C2/goldstandard/100_multifactorial/DREAM4_GoldStandard_InSilico_Size100_multifactorial_3.tsv
dreamtools/dream4/D4C2/goldstandard/100_multifactorial/DREAM4_GoldStandard_InSilico_Size100_multifactorial_4.tsv
dreamtools/dream4/D4C2/goldstandard/100_multifactorial/DREAM4_GoldStandard_InSilico_Size100_multifactorial_5.tsv
dreamtools/dream4/D4C2/templates/10/DREAM4_Example_InSilico_Size10_1.txt
dreamtools/dream4/D4C2/templates/10/DREAM4_Example_InSilico_Size10_2.txt
dreamtools/dream4/D4C2/templates/10/DREAM4_Example_InSilico_Size10_3.txt
dreamtools/dream4/D4C2/templates/10/DREAM4_Example_InSilico_Size10_4.txt
dreamtools/dream4/D4C2/templates/10/DREAM4_Example_InSilico_Size10_5.txt
dreamtools/dream4/D4C2/templates/100/DREAM4_Example_InSilico_Size100_1.txt
dreamtools/dream4/D4C2/templates/100/DREAM4_Example_InSilico_Size100_2.txt
dreamtools/dream4/D4C2/templates/100/DREAM4_Example_InSilico_Size100_3.txt
dreamtools/dream4/D4C2/templates/100/DREAM4_Example_InSilico_Size100_4.txt
dreamtools/dream4/D4C2/templates/100/DREAM4_Example_InSilico_Size100_5.txt
dreamtools/dream4/D4C2/templates/100_multifactorial/DREAM4_Example_InSilico_Size100_multifactorial_1.txt
dreamtools/dream4/D4C2/templates/100_multifactorial/DREAM4_Example_InSilico_Size100_multifactorial_2.txt
dreamtools/dream4/D4C2/templates/100_multifactorial/DREAM4_Example_InSilico_Size100_multifactorial_3.txt
dreamtools/dream4/D4C2/templates/100_multifactorial/DREAM4_Example_InSilico_Size100_multifactorial_4.txt
dreamtools/dream4/D4C2/templates/100_multifactorial/DREAM4_Example_InSilico_Size100_multifactorial_5.txt
dreamtools/dream4/D4C3/README.rst
dreamtools/dream4/D4C3/__init__.py
dreamtools/dream4/D4C3/scoring.py
dreamtools/dream4/D4C3/data/common_gold.csv
dreamtools/dream4/D4C3/data/common_training.csv
dreamtools/dream4/D4C3/data/pdf_score_1.mat
dreamtools/dream4/D4C3/data/pdf_score_2.mat
dreamtools/dream4/D4C3/data/pdf_score_3.mat
dreamtools/dream4/D4C3/data/pdf_score_4.mat
dreamtools/dream4/D4C3/data/pdf_score_5.mat
dreamtools/dream4/D4C3/data/pdf_score_6.mat
dreamtools/dream4/D4C3/data/pdf_score_7.mat
dreamtools/dream4/D4C3/goldstandard/D4C3_goldstandard.csv
dreamtools/dream4/D4C3/templates/D4C3_templates.csv
dreamtools/dream5/__init__.py
dreamtools/dream5/D5C1/README.rst
dreamtools/dream5/D5C1/__init__.py
dreamtools/dream5/D5C1/scoring.py
dreamtools/dream5/D5C1/data/DREAM5_EAR_TestSet.txt
dreamtools/dream5/D5C1/data/DREAM5_EAR_TrainingSet.txt
dreamtools/dream5/D5C1/data/__init__.py
dreamtools/dream5/D5C2/README.rst
dreamtools/dream5/D5C2/__init__.py
dreamtools/dream5/D5C2/scoring.py
dreamtools/dream5/D5C2/data/d5c2_data_plot.csv
dreamtools/dream5/D5C2/data/d5c2_data_table.csv
dreamtools/dream5/D5C3/README.rst
dreamtools/dream5/D5C3/__init__.py
dreamtools/dream5/D5C3/scoring.py
dreamtools/dream5/D5C3/goldstandard/DREAM5_SysGenB1_TestPhenotypeData.txt
dreamtools/dream5/D5C3/goldstandard/DREAM5_SysGenB2_TestPhenotypeData.txt
dreamtools/dream5/D5C3/goldstandard/DREAM5_SysGenB3_TestPhenotypeData.txt
dreamtools/dream5/D5C3/templates/DREAM5_SysGenB1_your_Predictions.txt
dreamtools/dream5/D5C3/templates/DREAM5_SysGenB2_your_Predictions.txt
dreamtools/dream5/D5C3/templates/DREAM5_SysGenB3_your_Predictions.txt
dreamtools/dream5/D5C4/README.rst
dreamtools/dream5/D5C4/__init__.py
dreamtools/dream5/D5C4/scoring.py
dreamtools/dream6/__init__.py
dreamtools/dream6/D6C1/README.rst
dreamtools/dream6/D6C1/__init__.py
dreamtools/dream6/D6C1/scoring.py
dreamtools/dream6/D6C1/leaderboards/LB.csv
dreamtools/dream6/D6C2/README.rst
dreamtools/dream6/D6C2/__init__.py
dreamtools/dream6/D6C2/scoring.py
dreamtools/dream6/D6C3/README.rst
dreamtools/dream6/D6C3/__init__.py
dreamtools/dream6/D6C3/scoring.py
dreamtools/dream6/D6C3/data/D6C3_data.zip
dreamtools/dream6/D6C3/data/predictions/Dream6_expred_predictions_BioFeatures+FiRST.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_10.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_11.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_12.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_13.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_14.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_15.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_16.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_17.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_19.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_20.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_21.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_3.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_4.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_5.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_6.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_7.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_8.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_9.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_FiRST.txt
dreamtools/dream6/D6C3/data/predictions/dream6_expred_predictions_c4lab.txt
dreamtools/dream6/D6C3/goldstandard/D6C3_goldstandard.txt
dreamtools/dream6/D6C3/misc/README.rst
dreamtools/dream6/D6C3/templates/D6C3_template.txt
dreamtools/dream6/D6C4/README.rst
dreamtools/dream6/D6C4/__init__.py
dreamtools/dream6/D6C4/scoring.py
dreamtools/dream6/D6C4/data/AMLTraining.csv
dreamtools/dream6/D6C4/data/DREAM6_AML_FilesTubesAndSubjects.CSV
dreamtools/dream6/D6C4/data/DREAM6_AML_TrainingSet.csv
dreamtools/dream6/D6C4/data/DREAM6_flowcap_download_info.txt
dreamtools/dream6/D6C4/goldstandard/AML.csv
dreamtools/dream6/D6C4/goldstandard/D6C4_goldstandard.txt
dreamtools/dream6/D6C4/misc/AML.R
dreamtools/dream6/D6C4/templates/D6C4_template.txt
dreamtools/dream6/D6C4/templates/README.txt
dreamtools/dream6/data/__init__.py
dreamtools/dream6/data/parameter_estimation/README.rst
dreamtools/dream6/parest/__init__.py
dreamtools/dream6/parest/dream6_challenge2.py
dreamtools/dream7/README.rst
dreamtools/dream7/__init__.py
dreamtools/dream7/D7C1/README.rst
dreamtools/dream7/D7C1/__init__.py
dreamtools/dream7/D7C1/scoring.py
dreamtools/dream7/D7C1/data/D7C1_param_proba.npy
dreamtools/dream7/D7C1/generator/README.rst
dreamtools/dream7/D7C1/goldstandard/model1_parameters_answer.txt
dreamtools/dream7/D7C1/goldstandard/model1_prediction_answer.txt
dreamtools/dream7/D7C1/goldstandard/model2_parameters_answer.txt
dreamtools/dream7/D7C1/goldstandard/model2_topology_answer.txt
dreamtools/dream7/D7C1/misc/README.rst
dreamtools/dream7/D7C1/templates/model1_parameters_alphabeta.txt
dreamtools/dream7/D7C1/templates/model1_timecourse_alphabeta.txt
dreamtools/dream7/D7C1/templates/model2_parameters_alphabeta.txt
dreamtools/dream7/D7C1/templates/network_topology_alphabeta.txt
dreamtools/dream7/D7C2/README.rst
dreamtools/dream7/D7C2/__init__.py
dreamtools/dream7/D7C2/scoring.py
dreamtools/dream7/D7C2/data/README.rst
dreamtools/dream7/D7C3/README.rst
dreamtools/dream7/D7C3/__init__.py
dreamtools/dream7/D7C3/scoring.py
dreamtools/dream7/D7C3/goldstandard/D7C3_goldstandard.csv
dreamtools/dream7/D7C3/goldstandard/README.rst
dreamtools/dream7/D7C3/templates/D7C3_template.csv
dreamtools/dream7/D7C3/templates/README.rst
dreamtools/dream7/D7C4/README.rst
dreamtools/dream7/D7C4/__init__.py
dreamtools/dream7/D7C4/prob_Cidx.R
dreamtools/dream7/D7C4/scoring.py
dreamtools/dream7/D7C4/weighted_average_concordance_index.pl
dreamtools/dream7/D7C4/data/DREAM7_DrugSensitivity1_Drug_Response_Training.txt
dreamtools/dream7/D7C4/data/DREAM7_DrugSensitivity1_Pooled_SD.txt
dreamtools/dream7/D7C4/data/DREAM7_DrugSensitivity1_Train_Test_Ranked.csv
dreamtools/dream7/D7C4/data/DREAM7_DrugSensitivity1_drug_zscores.txt
dreamtools/dream7/D7C4/data/DREAM7_DrugSensitivity1_drug_zscores.txt.tmp
dreamtools/dream7/D7C4/data/DREAM7_DrugSensitivity1_test_data.txt
dreamtools/dream7/D7C4/goldstandard/D7C4_B_synergy_IC20.tsv
dreamtools/dream7/D7C4/templates/D7C4_template.csv
dreamtools/dream7/D7C4/templates/D7C4_template_B.csv
dreamtools/dream7/data/__init__.py
dreamtools/dream8/README.rst
dreamtools/dream8/__init__.py
dreamtools/dream8/D8C1/README.rst
dreamtools/dream8/D8C1/__init__.py
dreamtools/dream8/D8C1/aggregation.py
dreamtools/dream8/D8C1/commons.py
dreamtools/dream8/D8C1/cython_scoring.c
dreamtools/dream8/D8C1/cython_scoring.pyx
dreamtools/dream8/D8C1/downloads.py
dreamtools/dream8/D8C1/hpn.py
dreamtools/dream8/D8C1/ranking.py
dreamtools/dream8/D8C1/sc1a_tools.py
dreamtools/dream8/D8C1/scoring.py
dreamtools/dream8/D8C1/setup.py
dreamtools/dream8/D8C1/submissions.py
dreamtools/dream8/D8C1/data/MD-BT20_main_for_null.csv
dreamtools/dream8/D8C1/data/MD-BT549_main_for_null.csv
dreamtools/dream8/D8C1/data/MD-MCF7_main_for_null.csv
dreamtools/dream8/D8C1/data/MD-UACC812_main_for_null.csv
dreamtools/dream8/D8C1/data/MD_insilico.csv
dreamtools/dream8/D8C1/data/SC1A_aucs.json
dreamtools/dream8/D8C1/data/SC1A_results.json
dreamtools/dream8/D8C1/data/SC1B_results.json
dreamtools/dream8/D8C1/data/SC2A_results_v1.json
dreamtools/dream8/D8C1/data/SC2A_rmses_v1.json
dreamtools/dream8/D8C1/data/SC2B_results.json
dreamtools/dream8/D8C1/data/SC2B_results_v1.json
dreamtools/dream8/D8C1/data/SC2B_rmses.json
dreamtools/dream8/D8C1/data/SC2B_rmses_v1.json
dreamtools/dream8/D8C1/data/__init__.py
dreamtools/dream8/D8C1/data/sc1a_null_aucs_mean_sigma.dat
dreamtools/dream8/D8C1/data/sc1a_null_aucs_mean_sigma.json
dreamtools/dream8/D8C1/data/sc2a_null_mu_sigma.dat
dreamtools/dream8/D8C1/data/sc2a_null_mu_sigma.json
dreamtools/dream8/D8C1/data/sc2a_null_mu_sigma_new.dat
dreamtools/dream8/D8C1/data/sc2a_null_mu_sigma_new.json
dreamtools/dream8/D8C1/data/sc2b_null_mu_sigma.dat
dreamtools/dream8/D8C1/data/sc2b_null_mu_sigma.json
dreamtools/dream8/D8C1/goldstandard/TrueGraph.csv
dreamtools/dream8/D8C1/goldstandard/__init__.py
dreamtools/dream8/D8C1/misc/README.rst
dreamtools/dream8/D8C2/README.rst
dreamtools/dream8/D8C2/__init__.py
dreamtools/dream8/D8C2/functionsLeaderboard_sch1.R
dreamtools/dream8/D8C2/functionsLeaderboard_sch2.R
dreamtools/dream8/D8C2/prob_Cidx.R
dreamtools/dream8/D8C2/sc1.py
dreamtools/dream8/D8C2/sc2.py
dreamtools/dream8/D8C2/scoring.py
dreamtools/dream8/D8C2/tests_sch1.R
dreamtools/dream8/D8C2/tests_sch2.R
dreamtools/dream8/D8C2/data/README.rst
dreamtools/dream8/D8C2/data/__init__.py
dreamtools/dream8/D8C2/data/data_sch1.RData
dreamtools/dream8/D8C2/data/data_sch2.RData
dreamtools/dream8/D8C2/data/test_sc1.csv
dreamtools/dream8/D8C2/data/test_sc2.csv
dreamtools/dream8/D8C3/README.rst
dreamtools/dream8/D8C3/__init__.py
dreamtools/dream8/D8C3/scoring.py
dreamtools/dream8/D8C3/goldstandard/gold_parameters.mat
dreamtools/dream8dot5/README.rst
dreamtools/dream8dot5/__init__.py
dreamtools/dream8dot5/D8dot5C1/README.rst
dreamtools/dream8dot5/D8dot5C1/__init__.py
dreamtools/dream8dot5/D8dot5C1/sc1.py
dreamtools/dream8dot5/D8dot5C1/sc2.py
dreamtools/dream8dot5/D8dot5C1/scoring.py
dreamtools/dream8dot5/D8dot5C1/goldstandard/dummy_goldStandard.csv
dreamtools/dream8dot5/D8dot5C1/templates/dummy_template_sc1.csv
dreamtools/dream8dot5/D8dot5C1/templates/dummy_template_sc2.csv
dreamtools/dream9/__init__.py
dreamtools/dream9/D9C1/README.rst
dreamtools/dream9/D9C1/__init__.py
dreamtools/dream9/D9C1/scoring.py
dreamtools/dream9/D9C1/goldstandard/D9C1_goldstandard_sc2.txt
dreamtools/dream9/D9C1/goldstandard/README.rst
dreamtools/dream9/D9C1/misc/BroadDREAM9Scoring.R
dreamtools/dream9/D9C1/templates/README.rst
dreamtools/dream9/D9C3/README.rst
dreamtools/dream9/D9C3/__init__.py
dreamtools/dream9/D9C3/scoring.py
dreamtools/dream9dot5/README.rst
dreamtools/dream9dot5/__init__.py
dreamtools/dream9dot5/D9dot5C1/DREAM_Olfaction_scoring_Q1.pl
dreamtools/dream9dot5/D9dot5C1/DREAM_Olfaction_scoring_Q2.pl
dreamtools/dream9dot5/D9dot5C1/DREAM_Olfactory_S1_validation.pl
dreamtools/dream9dot5/D9dot5C1/DREAM_Olfactory_S2_validation.pl
dreamtools/dream9dot5/D9dot5C1/README.rst
dreamtools/dream9dot5/D9dot5C1/__init__.py
dreamtools/dream9dot5/D9dot5C1/scoring.py
dreamtools/dream9dot5/D9dot5C2/README.rst
dreamtools/dream9dot5/D9dot5C2/__init__.py
dreamtools/dream9dot5/D9dot5C2/scoring.py
test/__init__.py
test/admin/__init__.py
test/admin/test_download_data.py
test/core/__init__.py
test/core/test_challenge.py
test/core/test_cindex.py
test/core/test_scoring.py
test/core/test_ziptools.py
test/dream10/__init__.py
test/dream2/__init__.py
test/dream2/test_d2c1.py
test/dream2/test_d2c2.py
test/dream2/test_d2c3.py
test/dream2/test_d2c4.py
test/dream2/test_d2c5.py
test/dream3/__init__.py
test/dream3/test_d3c1.py
test/dream3/test_d3c2.py
test/dream3/test_d3c3.py
test/dream3/test_d3c4.py
test/dream4/__init__.py
test/dream4/test_d4c1.py
test/dream4/test_d4c2.py
test/dream4/test_d4c3.py
test/dream5/__init__.py
test/dream5/test_d5c1.py
test/dream5/test_d5c2.py
test/dream5/test_d5c3.py
test/dream5/test_d5c4.py
test/dream6/__init__.py
test/dream6/test_d6c2.py
test/dream6/test_d6c3.py
test/dream6/test_d6c4.py
test/dream7/__init__.py
test/dream7/test_d7c1.py
test/dream7/test_d7c3.py
test/dream7/test_d7c4.py
test/dream8/__init__.py
test/dream8/test_d8c1.py
test/dream8/test_d8c2.py
test/dream8/D8C1/__init__.py
test/dream8/D8C1/test_aggregation.py
test/dream8/D8C1/test_downloads.py
test/dream8/D8C1/test_ranking.py
test/dream8/D8C1/test_submissions.py
test/dream8dot5/__init__.py
test/dream8dot5/test_d8dot5.py
test/dream9/__init__.py
test/dream9/test_d9c1.py
test/dream9/test_d9c3.py
test/dream9dot5/__init__.py
test/dream9dot5/test_d9dot5.py