package:
  name: circlator
  version: "1.5.0"

source:
  fn: circlator-1.5.0.tar.gz
  url: https://pypi.python.org/packages/57/82/fc05d2d892854664c8e033af7e451721cc75ffa47b83f97adffa9e940e7b/circlator-1.5.0.tar.gz
  md5: c92bc70c40874f209e9e93378d6d0c9d

build:
  skip: True # [py27]

requirements:
  build:
    - python
    - setuptools
    - openpyxl
    - pyfastaq >=3.12.1
    - pysam >=0.8.1,<=0.9.1
    - pymummer >=0.9.0
    - bio_assembly_refinement >=0.4.0

  run:
    - python
    - openpyxl
    - pyfastaq >=3.12.1
    - pysam >=0.8.1,<=0.9.1
    - pymummer >=0.9.0
    - bio_assembly_refinement >=0.4.0
    - bwa
    - prodigal
    - samtools
    - spades

test:
  # Python imports
  imports:
    - circlator
    - circlator.tasks

  # commands:
    # You can put test commands to be run here.  Use this to test that the
    # entry points work.

  requires:
    - nose >=1.3

about:
  home: https://github.com/sanger-pathogens/circlator
  license: GNU General Public License v3 (GPLv3)
  summary: 'circlator: a tool to circularise genome assemblies'
  license_family: Public-Domain
