# This file created by conda-build 2.0.7
# meta.yaml template originally from:
# /Users/travis/build/bioconda/bioconda-recipes/recipes/circlator, last modified Mon Apr  3 16:42:52 2017
# ------------------------------------------------

package:
    name: circlator
    version: 1.5.0
source:
    fn: circlator-1.5.0.tar.gz
    md5: c92bc70c40874f209e9e93378d6d0c9d
    url: https://pypi.python.org/packages/57/82/fc05d2d892854664c8e033af7e451721cc75ffa47b83f97adffa9e940e7b/circlator-1.5.0.tar.gz
build: {}
requirements:
    build:
        - python
        - setuptools
        - openpyxl
        - pyfastaq >=3.12.1
        - pysam >=0.8.1,<=0.9.1
        - pymummer >=0.9.0
        - bio_assembly_refinement >=0.4.0
    run:
        - python
        - openpyxl
        - pyfastaq >=3.12.1
        - pysam >=0.8.1,<=0.9.1
        - pymummer >=0.9.0
        - bio_assembly_refinement >=0.4.0
        - bwa
        - prodigal
        - samtools
        - spades
test:
    imports:
        - circlator
        - circlator.tasks
    requires:
        - nose >=1.3
about:
    home: https://github.com/sanger-pathogens/circlator
    license: GNU General Public License v3 (GPLv3)
    license_family: Public-Domain
    summary: 'circlator: a tool to circularise genome assemblies'
