# This file created by conda-build 3.19.2
# meta.yaml template originally from:
# /Users/distiller/project/recipes/bowtie2, last modified Thu Oct  8 04:03:12 2020
# ------------------------------------------------

package:
    name: bowtie2
    version: 2.4.2
source:
    sha256: ea33a1562faf759b21b3a905e20b87a3524ac4e53af8cd723d9a9f31ee159c8a
    url: https://github.com/BenLangmead/bowtie2/archive/v2.4.2.tar.gz
build:
    number: '0'
    string: py37h5e6fd57_0
requirements:
    build:
        - cctools 949.0.1 h22b1bf0_0
        - cctools_osx-64 949.0.1 h5ba7a2e_0
        - clang 9.0.1 default_hf57f61e_0
        - clang_osx-64 9.0.1 h05bbb7f_2
        - clangxx 9.0.1 default_hf57f61e_0
        - clangxx_osx-64 9.0.1 h05bbb7f_2
        - compiler-rt 9.0.1 h6a512c6_3
        - compiler-rt_osx-64 9.0.1 h99342c6_3
        - ld64 530 0
        - ld64_osx-64 530 h3c32e8a_0
        - libcxx 10.0.1 h5f48129_0
        - libllvm9 9.0.1 h7475705_1
        - llvm-tools 9.0.1 h1341992_1
        - tapi 1000.10.8 h879752b_4
        - zlib 1.2.11 h7795811_1009
    host:
        - ca-certificates 2020.6.20 hecda079_0
        - libcxx 10.0.1 h5f48129_0
        - libffi 3.2.1 hb1e8313_1007
        - ncurses 6.2 hb1e8313_1
        - openssl 1.1.1h haf1e3a3_0
        - python 3.7.8 hc9dea61_1_cpython
        - python_abi 3.7 1_cp37m
        - readline 8.0 h0678c8f_2
        - sqlite 3.33.0 h960bd1c_1
        - tbb 2019.9 ha1b3eb9_1
        - tbb-devel 2019.9 ha1b3eb9_1
        - tk 8.6.10 hb0a8c7a_1
        - xz 5.2.5 haf1e3a3_1
        - zlib 1.2.11 h7795811_1009
    run:
        - libcxx >=9.0.1
        - perl
        - python >=3.7,<3.8.0a0
        - python_abi 3.7.* *_cp37m
        - tbb >=2019.9
        - zlib >=1.2.11,<1.3.0a0
        - zlib >=1.2.11,<1.3.0a0
test:
    commands:
        - bowtie2 --help
        - bowtie2-align-l --help
        - bowtie2-align-s --help
        - bowtie2-build --help
        - bowtie2-build-l --help
        - bowtie2-build-s --help
        - bowtie2-inspect --help
        - bowtie2-inspect-l --help
        - bowtie2-inspect-s --help
about:
    home: http://bowtie-bio.sourceforge.net/bowtie2/index.shtml
    license: GPL-3.0-only
    license_file: LICENSE
    summary: Fast and sensitive gapped read alignment
extra:
    copy_test_source_files: true
    final: true
    identifiers:
        - biotools:bowtie2
        - debian:bowtie2
        - doi:10.1038/nmeth.1923
        - usegalaxy-eu:bowtie2
