# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/bioconductor-vanillaice, last modified Fri Jul 14 06:05:00 2023
# ------------------------------------------------

package:
  name: bioconductor-vanillaice
  version: 1.62.0
source:
  md5: e1544c4961ab0be39a24130c53fce392
  url:
    - https://bioarchive.galaxyproject.org/VanillaICE_1.62.0.tar.gz
    - https://bioconductor.org/packages/3.17/bioc/src/contrib/Archive/VanillaICE/VanillaICE_1.62.0.tar.gz
    - https://bioconductor.org/packages/3.17/bioc/src/contrib/VanillaICE_1.62.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-vanillaice/bioconductor-vanillaice_1.62.0_src_all.tar.gz
build:
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r43h4c50009_0
requirements:
  build:
    - ca-certificates 2023.5.7 h8857fd0_0
    - cctools_osx-64 973.0.1 h48a5a9d_13
    - clang 15.0.7 h694c41f_2
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    - icu 72.1 h7336db1_0
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    - sigtool 0.1.3 h88f4db0_0
    - tapi 1100.0.11 h9ce4665_0
    - xz 5.2.6 h775f41a_0
    - zstd 1.5.2 h829000d_7
  host:
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    - llvm-openmp 16.0.6 hff08bdf_0
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    - pcre2 10.40 h1c4e4bc_0
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    - python 3.11.4 h30d4d87_0_cpython
    - python_abi 3.11 3_cp311
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    - r-askpass 1.1 r43h6dc245f_4
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    - r-vgam 1.1_8 r43hfe07776_1
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    - r-yaml 2.3.7 r43h6dc245f_1
    - readline 8.2 h9e318b2_1
    - setuptools 68.0.0 pyhd8ed1ab_0
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    - zstd 1.5.2 h829000d_7
  run:
    - bioconductor-biobase >=2.60.0,<2.61.0
    - bioconductor-biocgenerics >=0.46.0,<0.47.0
    - bioconductor-bsgenome.hsapiens.ucsc.hg18 >=1.3.0,<1.4.0
    - bioconductor-crlmm >=1.58.0,<1.59.0
    - bioconductor-genomeinfodb >=1.36.0,<1.37.0
    - bioconductor-genomicranges >=1.52.0,<1.53.0
    - bioconductor-iranges >=2.34.0,<2.35.0
    - bioconductor-matrixgenerics >=1.12.0,<1.13.0
    - bioconductor-oligoclasses >=1.62.0,<1.63.0
    - bioconductor-s4vectors >=0.38.0,<0.39.0
    - bioconductor-summarizedexperiment >=1.30.0,<1.31.0
    - libblas >=3.9.0,<4.0a0
    - liblapack >=3.9.0,<4.0a0
    - r-base >=4.3,<4.4.0a0
    - r-data.table
    - r-foreach
    - r-lattice
    - r-matrixstats
test:
  commands:
    - $R -e "library('VanillaICE')"
about:
  description: Hidden Markov Models for characterizing chromosomal alteration in high
    throughput SNP arrays.
  home: https://bioconductor.org/packages/3.17/bioc/html/VanillaICE.html
  license: LGPL-2
  license_file: /opt/mambaforge/envs/bioconda/conda-bld/bioconductor-vanillaice_1689319884857/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_/lib/R/share/licenses/LGPL-2
  summary: A Hidden Markov Model for high throughput genotyping arrays
extra:
  copy_test_source_files: true
  final: true
  identifiers:
    - biotools:vanillaice
