CHANGES IN VERSION 1.12.1
-------------------------
    o Fix typos

CHANGES IN VERSION 1.12.0
-------------------------
    o Bioconductor 3.14 release

CHANGES IN VERSION 1.10.0
-------------------------
    o Bioconductor 3.13 release

CHANGES IN VERSION 1.8.0
-------------------------
    o Bioconductor 3.12 release
    o added limits argument for spectrum plot x-values to harmonize color scale
    of multiple spectrum plots
    o replaced Rcpp::RcppArmadillo::sample() with now fixed Rcpp::sample()

CHANGES IN VERSION 1.6.2
-------------------------
    o updated paper references
    o fixed minor formatting issues
    o incremented Roxygen2 version

CHANGES IN VERSION 1.6.0
-------------------------
    o Bioconductor 3.11 release
    o changed function names to adhere to tidyverse style guide
    (breaking change)
    o change method names to adhere to tidyverse style guide (breaking change)
    o changed parameter names to adhere to tidyverse style guide
    (breaking change)
    o changed internal variable names to adhere to tidyverse style guide
    o fixed issue with mixed cached and uncached sequences
    o added unit tests
    o fixed issue with uninitialized IUPAC table
    o removed unused C++ functions
    o gracefully stop cluster after parLapply
    o added transcript values overlay to spectrum plots
    o fixed issue due to floating point machine precision
    o improved efficiency of transcript set shuffling
    o replaced Rcpp::sample() with Rcpp::RcppArmadillo::sample() to avoid
    memory leak
    o fix roxygen annotation for package data

CHANGES IN VERSION 1.4.0
-------------------------
    o Bioconductor 3.10 release

CHANGES IN VERSION 1.2.1
-------------------------
    o updated author list

CHANGES IN VERSION 1.2.0
-------------------------
    o Bioconductor 3.9 release

CHANGES IN VERSION 1.0.2
-------------------------
    o clarified return value description of k-mer-based TSMA
    o updated roxygen2
    o updated license
    o clarified argument description of SPMA
    o fixed issue with multi-threaded cluster environment

CHANGES IN VERSION 1.0.1
-------------------------
    o fixed typo in vignette
    o added code example for drawVolcanoPlot function
    o increased size of circles for motif-associated k-mers in drawVolcanoPlot
    function

CHANGES IN VERSION 1.0.0
-------------------------
    o initial release on Bioconductor 3.8 release branch

CHANGES IN VERSION 0.99.4
-------------------------
    o initial release on Bioconductor
