TargetSearch-package	TargetSearch-package
$,tsLib-method	tsLib-class
$,tsSample-method	tsSample-class
as.list,tsMSdata-method	tsMSdata-class
as.list.tsMSdata	tsMSdata-class
as.list.tsMSdata,tsMSdata-method	tsMSdata-class
as.list.tsProfile	tsMSdata-class
as.list.tsProfile,tsMSdata-method	tsMSdata-class
baseline	baseline
baselineCorrection	baselineCorrection
baselineCorrectionQuant	baselineCorrectionQuant
bin2text	file
c,tsLib-method	tsLib-class
c,tsRim-method	tsRim-class
c,tsSample-method	tsSample-class
CDFfiles	tsSample-class
CDFfiles,tsSample-method	tsSample-class
CDFfiles<-	tsSample-class
CDFfiles<-,tsSample-method	tsSample-class
CDFpath	tsSample-class
CDFpath,tsSample-method	tsSample-class
CDFpath<-	tsSample-class
CDFpath<-,tsSample-method	tsSample-class
checkRimLim	checkRimLim
corRI	TSExample
FAMEoutliers	FAMEoutliers
fileFormat	tsSample-class
fileFormat,tsSample-method	tsSample-class
fileFormat<-	tsSample-class
fileFormat<-,tsSample-method	tsSample-class
FindAllPeaks	FindAllPeaks
FindPeaks	FindPeaks
fixRI	fixRI
fixRIcorrection	TargetSearch-defunct
fixRIcorrection-defunct	TargetSearch-defunct
ImportFameSettings	ImportFameSettings
ImportLibrary	ImportLibrary
ImportLibrary.msp	ImportLibrary
ImportLibrary.tab	ImportLibrary
ImportSamples	ImportSamples
ImportSamplesFromDir	ImportSamples
Intensity	tsMSdata-class
Intensity,tsMSdata-method	tsMSdata-class
Intensity<-	tsMSdata-class
Intensity<-,tsMSdata-method	tsMSdata-class
length,tsLib-method	tsLib-class
length,tsRim-method	tsRim-class
length,tsSample-method	tsSample-class
libData	tsLib-class
libData,tsLib-method	tsLib-class
libData<-	tsLib-class
libData<-,tsLib-method	tsLib-class
libId	tsLib-class
libId,tsLib-method	tsLib-class
libName	tsLib-class
libName,tsLib-method	tsLib-class
libName<-	tsLib-class
libName<-,tsLib-method	tsLib-class
libRI	tsLib-class
libRI,tsLib-method	tsLib-class
libRI<-	tsLib-class
libRI<-,tsLib-method	tsLib-class
medianRILib	medianRILib
medRI	tsLib-class
medRI,tsLib-method	tsLib-class
medRI<-	tsLib-class
medRI<-,tsLib-method	tsLib-class
metabProfile	TSExample
ncdf4Convert	ncdf4Convert-method
ncdf4Convert,tsSample-method	ncdf4Convert-method
ncdf4_convert	ncdf4_convert
ncdf4_convert_from_path	ncdf4_convert_from_path
ncdf4_data_extract	ncdf4_data_extract
ncdf4_plot_peak	ncdf4_plot_peak
ncdf4_update_ri	ncdf4_update_ri
NetCDFPeakFinding	NetCDFPeakFinding
peakCDFextraction	peakCDFextraction
peakData	TSExample
peakFind	peakFind
plotAllRIdev	plotRIdev
plotAllSpectra	plotSpectra
plotFAME	plotFAME
plotPeak	plotPeak
plotPeakRI	plotPeakRI
plotPeakSimple	plotPeakSimple
plotRIdev	plotRIdev
plotSpectra	plotSpectra
Profile	Profile
ProfileCleanUp	ProfileCleanUp
profileInfo	tsProfile-class
profileInfo,tsProfile-method	tsProfile-class
profileInfo<-	tsProfile-class
profileInfo<-,tsProfile-method	tsProfile-class
profileInt	tsProfile-class
profileInt,tsProfile-method	tsProfile-class
profileInt<-	tsProfile-class
profileInt<-,tsProfile-method	tsProfile-class
profileRI	tsProfile-class
profileRI,tsProfile-method	tsProfile-class
profileRI<-	tsProfile-class
profileRI<-,tsProfile-method	tsProfile-class
profileRT	tsProfile-class
profileRT,tsProfile-method	tsProfile-class
profileRT<-	tsProfile-class
profileRT<-,tsProfile-method	tsProfile-class
quantMass	tsLib-class
quantMass,tsLib-method	tsLib-class
quantMass<-	tsLib-class
quantMass<-,tsLib-method	tsLib-class
quantMatrix	quantMatrix
refLib	tsLib-class
refLib,tsLib-method	tsLib-class
refLibrary	TSExample
retIndex	tsMSdata-class
retIndex,tsMSdata-method	tsMSdata-class
retIndex<-	tsMSdata-class
retIndex<-,tsMSdata-method	tsMSdata-class
retTime	tsMSdata-class
retTime,tsMSdata-method	tsMSdata-class
retTime<-	tsMSdata-class
retTime<-,tsMSdata-method	tsMSdata-class
ri2rt	ri2rt
RIcorrect	RIcorrect
RIdev	tsLib-class
RIdev,tsLib-method	tsLib-class
RIdev<-	tsLib-class
RIdev<-,tsLib-method	tsLib-class
RIfiles	tsSample-class
RIfiles,tsSample-method	tsSample-class
RIfiles<-	tsSample-class
RIfiles<-,tsSample-method	tsSample-class
RImatrix	TSExample
riMatrix	riMatrix
rimLimits	tsRim-class
rimLimits,tsRim-method	tsRim-class
rimLimits<-	tsRim-class
rimLimits<-,tsRim-method	tsRim-class
rimMass	tsRim-class
rimMass,tsRim-method	tsRim-class
rimMass<-	tsRim-class
rimMass<-,tsRim-method	tsRim-class
rimStandard	tsRim-class
rimStandard,tsRim-method	tsRim-class
rimStandard<-	tsRim-class
rimStandard<-,tsRim-method	tsRim-class
RIpath	tsSample-class
RIpath,tsSample-method	tsSample-class
RIpath<-	tsSample-class
RIpath<-,tsSample-method	tsSample-class
ri_data_extract	ri_data_extract
ri_plot_peak	ri_plot_peak
rt2ri	rt2ri
sampleData	tsSample-class
sampleData,tsSample-method	tsSample-class
sampleData<-	tsSample-class
sampleData<-,tsSample-method	tsSample-class
sampleDays	tsSample-class
sampleDays,tsSample-method	tsSample-class
sampleDays<-	tsSample-class
sampleDays<-,tsSample-method	tsSample-class
sampleDescription	TSExample
sampleNames	tsSample-class
sampleNames,tsSample-method	tsSample-class
sampleNames<-	tsSample-class
sampleNames<-,tsSample-method	tsSample-class
sampleRI	sampleRI
selMass	tsLib-class
selMass,tsLib-method	tsLib-class
selMass<-	tsLib-class
selMass<-,tsLib-method	tsLib-class
show,tsLib-method	tsLib-class
show,tsMSdata-method	tsMSdata-class
show,tsProfile-method	tsProfile-class
show,tsSample-method	tsSample-class
spectra	tsLib-class
spectra,tsLib-method	tsLib-class
spectra<-	tsLib-class
spectra<-,tsLib-method	tsLib-class
TargetSearch	TargetSearch-package
TargetSearch-defunct	TargetSearch-defunct
TargetSearchGUI	TargetSearch-defunct
text2bin	file
topMass	tsLib-class
topMass,tsLib-method	tsLib-class
topMass<-	tsLib-class
topMass<-,tsLib-method	tsLib-class
TSExample	TSExample
tsLib-class	tsLib-class
tsMSdata-class	tsMSdata-class
tsProfile-class	tsProfile-class
tsRim-class	tsRim-class
tsSample-class	tsSample-class
tsUpdate	tsUpdate-method
tsUpdate,tsSample-method	tsUpdate-method
updateRI	updateRI
Write.Results	Write.Results
writeLibText	writeLibText
writeMSP	writeMSP
[,tsLib-method	tsLib-class
[,tsRim-method	tsRim-class
[,tsSample-method	tsSample-class
