# Subsampling of high-throughput sequencing count data

## Documentation for package ‘subSeq’ version 1.6.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

combineSubsamples | combine multiple subsamples objects
generateSubsampledMatrix | Generate the read matrix corresponding to a particular level
getSeed | Extract the global random seed from a subsamples object
hammer | ExpressionSet results from Hammer et al 2010
plot.subsamples | plot metrics as a function of subsampled read depth
plot.summary.subsamples | plot metrics as a function of subsampled read depth
ss | Subsampling results using the hammer dataset
subsample | Subsample reads and perform statistical testing on each sample
summary.subsamples | calculate summary statistics for each subsampled depth in a subsamples object