{% set version = "1.6.0" %}
{% set name = "scfind" %}
{% set bioc = "3.9" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name }}/bioconductor-{{ name }}_{{ version }}_src_all.tar.gz'
  md5: e258b0f73b91921b7c068431b09fa3db
build:
  number: 1
  rpaths:
    - lib/R/lib/
    - lib/
# Suggests: knitr, rmarkdown, testthat
requirements:
  host:
    - 'bioconductor-singlecellexperiment >=1.6.0,<1.7.0'
    - 'bioconductor-summarizedexperiment >=1.14.0,<1.15.0'
    - r-base
    - r-bit
    - r-dplyr
    - r-hash
    - 'r-rcpp >=0.12.12'
    - r-reshape2
  run:
    - 'bioconductor-singlecellexperiment >=1.6.0,<1.7.0'
    - 'bioconductor-summarizedexperiment >=1.14.0,<1.15.0'
    - r-base
    - r-bit
    - r-dplyr
    - r-hash
    - 'r-rcpp >=0.12.12'
    - r-reshape2
  build:
    - {{ compiler('c') }}
    - {{ compiler('cxx') }}
    - make
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: GPL-3
  summary: 'Recently a very large collection of single-cell RNA-seq (scRNA-seq) datasets has been generated and publicly released. For the collection to be useful, the information must be organized in a way that supports queries that are relevant to researchers. `scfind` builds an index from scRNA-seq datasets which organizes the information in a suitable and compact manner so that the datasets can be very efficiently searched for either cells or cell types in which a given list of genes is expressed.'

