Risa-package	Risa-package
AssayTab-class	AssayTab-class
getAnnotatedDataFrameAssay	getAnnotatedDataFrameAssay
getAssayRawDataFilenames	getAssayRawDataFilenames-methods
getAssayRawDataFilenames,AssayTab,logical-method	getAssayRawDataFilenames-methods
getAssayRawDataFilenames,MicroarrayAssayTab,logical-method	getAssayRawDataFilenames-methods
getAssayRawDataFilenames,MSAssayTab,logical-method	getAssayRawDataFilenames-methods
getAssayRawDataFilenames,NMRAssayTab,logical-method	getAssayRawDataFilenames-methods
getAssayRawDataFilenames,SeqAssayTab,logical-method	getAssayRawDataFilenames-methods
getAssayRawDataFilenames-methods	getAssayRawDataFilenames-methods
getExpressionSet	getExpressionSet
getMIAMEMetadata	getMIAMEMetadata
getMicroarrayAssayFilenames	getMicroarrayAssayFilenames
getMSAssayFilenames	getMSAssayFilenames
getRawDataFilenames	getRawDataFilenames-methods
getRawDataFilenames,ISATab,logical-method	getRawDataFilenames-methods
getRawDataFilenames-methods	getRawDataFilenames-methods
getStudyFilename	getStudyFilename
ISATab-class	ISAtab-class
isMicroarrayAssay	isMicroarrayAssay
isMSAssay	isMSAssay
MicroarrayAssayTab-class	AssayTab-class
MSAssayTab-class	AssayTab-class
NMRAssayTab	AssayTab-class
processAssayXcmsSet	processAssayXcmsSet
processAssayXcmsSet.1factor	processAssayXcmsSet.1factor
readISAtab	readISAtab
Risa	Risa-package
SeqAssayTab	AssayTab-class
suggestBiocPackage	suggestBiocPackage
updateAssayMetadata	updateAssayMetadata
write.assay.file	write.assay.file
write.investigation.file	write.investigation.file
write.ISAtab	write.isatab
write.study.file	write.study.file
[,AssayTab,ANY,ANY,ANY-method	AssayTab-class
[,AssayTab-method	AssayTab-class
[,ISATab,ANY,ANY,ANY-method	ISAtab-class
[,ISATab-method	ISAtab-class
[<-,AssayTab,ANY,ANY,ANY-method	AssayTab-class
[<-,AssayTab-method	AssayTab-class
[<-,ISATab,ANY,ANY,ANY-method	ISAtab-class
[<-,ISATab-method	ISAtab-class
