buildAnnotationStore	buildAnnotationStore
calcCoverage	calcCoverage
coverageRef	coverageRef
coverageRnaRef	coverageRnaRef
getAnnotation	getAnnotation
getBiotypes	getBiotypes
getr	simpleGetSet
kmeansDesign	kmeansDesign
mergeRuns	mergeRuns
preprocessRanges	preprocessRanges
profileMatrix	profileMatrix
recoup	recoup
recoupCorrelation	recoupCorrelation
recoupHeatmap	recoupHeatmap
recoupPlot	recoupPlot
recoupProfile	recoupProfile
recoup_test_data	recoup_test_data
removeData	removeData
setr	simpleGetSet
sliceObj	sliceObj
test.design	recoup_test_data
test.exons	recoup_test_data
test.genome	recoup_test_data
test.input	recoup_test_data
