CHANGES IN VERSION 0.99.11
-------------------------
BUG FIXES 

    o `:` added back to readHic for `strawr` region parsing.
    o `plotHicSquare` subsetting fixed for off diagonal regions.
    
NEW FEATURES

    o All Hi-C functions now allow input of remote Hi-C files.

CHANGES IN VERSION 0.99.9
-------------------------

This package was previously called `BentoBox`.

CHANGES IN VERSION 0.99.0
-------------------------

NEW FEATURES

    o Version bump to 0.99.0 for Bioconductor package submission.
    o `bb_mapColors` function for users to map a vector to a palette
    of colors.
    o `linecolor` parameter in `bb_plotPairs`, `bb_plotPairsArches`,
    and `bb_plotRanges` now accepts a single value, a vector of colors, 
    a `colorby` object, or the value "fill".

CHANGES IN VERSION 0.0.0.14
---------------------------

BUG FIXES 

    o R version requirement changed to (R >= 4.1.0) for proper plot placement.
    
NEW FEATURES

    o `colorby` object now has a `scalePerRegion` parameter to scale numerical
    `colorby` data to the range of data in a plotted genomic region.

CHANGES IN VERSION 0.0.0.13
---------------------------

SIGNIFICANT USER-VISIBLE CHANGES

    o `bb_plotManhattan` `fill` paramete now accepts a single value, 
    a vector of colors, or a `colorby` object.

CHANGES IN VERSION 0.0.0.12
---------------------------

SIGNIFICANT USER-VISIBLE CHANGES

    o `colorby` constructor now includes optional palette specification.
    o `bb_plotPairs`, `bb_plotPairsArches`, and `bb_plotRanges` `fill` parameter
    now accepts a single value, a vector of colors, or a `colorby` object.
    
BUG FIXES    

    o `GInteractions` assembly match checking moved before dataframe 
    conversion.

CHANGES IN VERSION 0.0.0.11
---------------------------

SIGNIFICANT USER-VISIBLE CHANGES

    o Data moved to `plotgardenerData` package.
    o Default genome assembly updated to "hg38".
    
BUG FIXES

    o Streamlined parameter parsing and data reading logic.

CHANGES IN VERSION 0.0.0.10
---------------------------

NEW FEATURES

    o Added unit tests with `testthat`.
    o `bb_annoDomains` function addition.
    o `bb_plotSignal` vertical orientation.
    
CHANGES IN VERSION 0.0.0.9
--------------------------

NEW FEATURES

    o Added a `NEWS` file to track changes to the package.
    
BUG FIXES

    o Updated viewport parsing for package `grid` version 4.1.0.
