{% set version = "1.22.0" %}
{% set name = "phenopath" %}
{% set bioc = "3.16" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name }}/bioconductor-{{ name }}_{{ version }}_src_all.tar.gz'
  md5: 88ebeb09839decbce45974019138fad2
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
# Suggests: knitr, rmarkdown, forcats, testthat, BiocStyle, SingleCellExperiment
requirements:
  host:
    - 'bioconductor-summarizedexperiment >=1.28.0,<1.29.0'
    - r-base
    - r-dplyr
    - r-ggplot2
    - 'r-rcpp >=0.12.8'
    - r-tibble
    - r-tidyr
    - libblas
    - liblapack
  run:
    - 'bioconductor-summarizedexperiment >=1.28.0,<1.29.0'
    - r-base
    - r-dplyr
    - r-ggplot2
    - 'r-rcpp >=0.12.8'
    - r-tibble
    - r-tidyr
  build:
    - {{ compiler('c') }}
    - {{ compiler('cxx') }}
    - make
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: 'Apache License (== 2.0)'
  summary: 'Genomic trajectories with heterogeneous genetic and environmental backgrounds'
  description: 'PhenoPath infers genomic trajectories (pseudotimes) in the presence of heterogeneous genetic and environmental backgrounds and tests for interactions between them.'

