netresponse-package	netresponse-package
add.ellipse	add.ellipse
bic.mixture	bic.mixture
bic.mixture.multivariate	bic.mixture.multivariate
bic.mixture.univariate	bic.mixture.univariate
bic.select.best.mode	bic.select.best.mode
centerData	centerData
check.matrix	check.matrix
check.network	check.network
continuous.responses	continuous.responses
detect.responses	detect.responses
dna	dna
enrichment.list.factor	enrichment.list.factor
enrichment.list.factor.minimal	enrichment.list.factor.minimal
factor.responses	factor.responses
factor.responses.minimal	factor.responses.minimal
filter.netw	filter.netw
filter.network	filter.network
find.similar.features	find.similar.features
generate.toydata	generate.toydata
get.dat	get.dat-NetResponseModel-method
get.dat,NetResponseModel-method	get.dat-NetResponseModel-method
get.mis	get.mis
get.model.parameters	get.model.parameters
get.subnets	get.subnets-NetResponseModel-method
get.subnets,NetResponseModel-method	get.subnets-NetResponseModel-method
getqofz	getqofz-NetResponseModel-method
getqofz,NetResponseModel-method	getqofz-NetResponseModel-method
independent.models	independent.models
list.responses.continuous.multi	list.responses.continuous.multi
list.responses.continuous.single	list.responses.continuous.single
list.responses.factor	list.responses.factor
list.responses.factor.minimal	list.responses.factor.minimal
list.significant.responses	list.significant.responses
listify.groupings	listify.groupings
mixture.model	mixture.model
model.stats	model.stats
netresponse	netresponse-package
NetResponseModel-class	NetResponseModel-class
order.responses	order.responses
osmo	osmo
P.r.s	P.r.s
P.rS	P.rS
P.rs.joint	P.rs.joint
P.rs.joint.individual	P.rs.joint.individual
P.S	P.S
P.s.individual	P.s.individual
P.s.r	P.s.r
P.Sr	P.Sr
pick.model.pairs	pick.model.pairs
pick.model.parameters	pick.model.parameters
PlotMixture	PlotMixture
PlotMixtureBivariate	PlotMixtureBivariate
PlotMixtureMultivariate	PlotMixtureMultivariate
PlotMixtureUnivariate	PlotMixtureUnivariate
plotPCA	plotPCA
plot_associations	plot_associations
plot_data	plot_data
plot_expression	plot_expression
plot_matrix	plot_matrix
plot_response	plot_response
plot_responses	plot_responses
plot_scale	plot_scale
plot_subnet	plot_subnet
read.sif	read.sif
remove.negative.edges	remove.negative.edges
response.enrichment	response.enrichment
response2sample	response2sample
sample2response	sample2response
set.breaks	set.breaks
show,NetResponseModel-method	NetResponseModel-class
split.qofz	split.qofz
toydata	toydata
update.model.pair	update.model.pair
vdp.mixt	vdp.mixt
vectorize.groupings	vectorize.groupings
write.netresponse.results	write.netresponse.results
[[,NetResponseModel-method	NetResponseModel-class
