{% set version = "2.44.0" %}
{% set name = "ncdfFlow" %}
{% set bioc = "3.16" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/Archive/{{ name }}/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
  md5: 24caf0dba4802c27180be2f7a7eb133a
build:
  number: 1
  rpaths:
    - lib/R/lib/
    - lib/
# Suggests: testthat,parallel,flowStats,knitr
requirements:
  host:
    - 'bioconductor-biobase >=2.58.0,<2.59.0'
    - 'bioconductor-biocgenerics >=0.44.0,<0.45.0'
    - 'bioconductor-flowcore >=2.10.0,<2.11.0'
    - 'bioconductor-rhdf5lib >=1.20.0,<1.21.0'
    - 'bioconductor-zlibbioc >=1.44.0,<1.45.0'
    - r-base
    - r-bh
    - r-cpp11
    - libblas
    - liblapack
  run:
    - 'bioconductor-biobase >=2.58.0,<2.59.0'
    - 'bioconductor-biocgenerics >=0.44.0,<0.45.0'
    - 'bioconductor-flowcore >=2.10.0,<2.11.0'
    - 'bioconductor-rhdf5lib >=1.20.0,<1.21.0'
    - 'bioconductor-zlibbioc >=1.44.0,<1.45.0'
    - r-base
    - r-bh
    - r-cpp11
  build:
    - {{ compiler('c') }}
    - {{ compiler('cxx') }}
    - make
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: AGPL-3.0-only
  summary: 'ncdfFlow: A package that provides HDF5 based storage for flow cytometry data.'
  description: 'Provides HDF5 storage based methods and functions for manipulation of flow cytometry data.'
  license_file: '{{ environ["PREFIX"] }}/lib/R/share/licenses/GPL-3'
extra:
  identifiers:
    - biotools:ncdfflow
    - doi:10.1016/j.copbio.2012.09.003
  parent_recipe:
    name: bioconductor-ncdfflow
    path: recipes/bioconductor-ncdfflow
    version: 2.26.0

