annotSite	annotSite
calculateProteolyticResistance	calculateProteolyticResistance
calculateTrypticity	calculateTrypticity
correlationPlotLiP	correlationPlotLiP
dataProcessPlotsLiP	dataProcessPlotsLiP
dataSummarizationLiP	dataSummarizationLiP
groupComparisonLiP	groupComparisonLiP
groupComparisonPlotsLiP	groupComparisonPlotsLiP
LiPRawData	LiPRawData
locateMod	locateMod
locatePTM	locatePTM
MSstatsLiP	MSstatsLiP
MSstatsLiP_data	MSstatsLiP_data
MSstatsLiP_model	MSstatsLiP_model
MSstatsLiP_Summarized	MSstatsLiP_Summarized
PCAPlotLiP	PCAPlotLiP
raw_lip	raw_lip
raw_prot	raw_prot
ResistanceBarcodePlotLiP	ResistanceBarcodePlotLiP
SkylineTest	SkylineTest
SkylinetoMSstatsLiPFormat	SkylinetoMSstatsLiPFormat
SpectronauttoMSstatsLiPFormat	SpectronauttoMSstatsLiPFormat
StructuralBarcodePlotLiP	StructuralBarcodePlotLiP
tidyFasta	tidyFasta
TrPRawData	TrPRawData
trypticHistogramLiP	trypticHistogramLiP
