{% set version = "1.22.0" %}
{% set name = "methyAnalysis" %}
{% set bioc = "3.7" %}

package:
  name: 'bioconductor-{{ name|lower }}'
  version: '{{ version }}'
source:
  url:
    - 'http://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
    - 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
    - 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
  sha256: 71a4c455b3588f58cf259bdc4227f8a86549be36017de5df36515b3a9d9dba87
build:
  number: 0
  rpaths:
    - lib/R/lib/
    - lib/
requirements:
  host:
    - 'bioconductor-annotate >=1.58.0,<1.60.0'
    - 'bioconductor-annotationdbi >=1.42.1,<1.44.0'
    - 'bioconductor-biobase >=2.40.0,<2.42.0'
    - 'bioconductor-biocgenerics >=0.26.0,<0.28.0'
    - 'bioconductor-biomart >=2.36.1,<2.38.0'
    - 'bioconductor-genefilter >=1.62.0,<1.64.0'
    - 'bioconductor-genomeinfodb >=1.16.0,<1.18.0'
    - 'bioconductor-genomicfeatures >=1.32.2,<1.34.0'
    - 'bioconductor-genomicranges >=1.32.7,<1.34.0'
    - 'bioconductor-genoset >=1.36.0,<1.38.0'
    - 'bioconductor-gviz >=1.24.0,<1.26.0'
    - 'bioconductor-iranges >=2.14.12,<2.16.0'
    - 'bioconductor-lumi >=2.32.0,<2.34.0'
    - 'bioconductor-methylumi >=2.26.0,<2.28.0'
    - 'bioconductor-org.hs.eg.db >=3.6.0,<3.8.0'
    - 'bioconductor-rtracklayer >=1.40.6,<1.42.0'
    - 'bioconductor-summarizedexperiment >=1.10.1,<1.12.0'
    - 'bioconductor-variantannotation >=1.26.1,<1.28.0'
    - r-base
  run:
    - 'bioconductor-annotate >=1.58.0,<1.60.0'
    - 'bioconductor-annotationdbi >=1.42.1,<1.44.0'
    - 'bioconductor-biobase >=2.40.0,<2.42.0'
    - 'bioconductor-biocgenerics >=0.26.0,<0.28.0'
    - 'bioconductor-biomart >=2.36.1,<2.38.0'
    - 'bioconductor-genefilter >=1.62.0,<1.64.0'
    - 'bioconductor-genomeinfodb >=1.16.0,<1.18.0'
    - 'bioconductor-genomicfeatures >=1.32.2,<1.34.0'
    - 'bioconductor-genomicranges >=1.32.7,<1.34.0'
    - 'bioconductor-genoset >=1.36.0,<1.38.0'
    - 'bioconductor-gviz >=1.24.0,<1.26.0'
    - 'bioconductor-iranges >=2.14.12,<2.16.0'
    - 'bioconductor-lumi >=2.32.0,<2.34.0'
    - 'bioconductor-methylumi >=2.26.0,<2.28.0'
    - 'bioconductor-org.hs.eg.db >=3.6.0,<3.8.0'
    - 'bioconductor-rtracklayer >=1.40.6,<1.42.0'
    - 'bioconductor-summarizedexperiment >=1.10.1,<1.12.0'
    - 'bioconductor-variantannotation >=1.26.1,<1.28.0'
    - r-base
test:
  commands:
    - '$R -e "library(''{{ name }}'')"'
about:
  home: 'http://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
  license: Artistic-2.0
  summary: 'The methyAnalysis package aims for the DNA methylation data analysis and visualization. A MethyGenoSet class is defined to keep the chromosome location information together with the data. The package also includes functions of estimating the methylation levels from Methy-Seq data.'
extra:
  identifiers:
    - biotools:methyanalysis
    - doi:10.1038/nmeth.3252
