adduct	adduct
adduct,MSP-method	adduct
adduct<-	adduct-set
adduct<-,MSP,character-method	adduct-set
allocatePrecursor2mz	allocatePrecursor2mz
binnedMSP	binnedMSP
binning	binning
cart2Polar	cart2Polar
circosLegend	circosLegend
classes	classes
classes,MSP-method	classes
classes<-	classes-set
classes<-,MSP,character-method	classes-set
combine	combine
combine,MSP,MSP-method	combine
combine,MSP-method	combine
compartmentTissue	compartmentTissue
convert2MSP	convert2MSP
convertExampleDF	convertExampleDF
convertMSP2MSP	convertMSP2MSP
createLink0Matrix	createLink0Matrix
createLinkMatrix	createLinkMatrix
createOrderedSimMat	createOrderedSimMat
createSimilarityMatrix	createSimilarityMatrix
cutLinkMatrix	cutLinkMatrix
cutUniquePrecursor	cutUniquePrecursor
finalMSP	idMSMStoMSP-data
getBegEndIndMSP	getBegEndIndMSP
getLinkMatrixIndices	getLinkMatrixIndices
getPrecursorMZ	getPrecursorMZ
getPrecursorMZ,MSP-method	getPrecursorMZ
getRT	getRT
getRT,MSP-method	getRT
highlight	highlight
idMSMStoMSP-data	idMSMStoMSP-data
information	information
information,MSP-method	information
information<-	information-set
information<-,MSP,character-method	information-set
length	length-method
length,MSP-method	length-method
minFragCart2Polar	minFragCart2Polar
MSP	MSP
MSP-class	MSP
msp2FunctionalLossesMSP	msp2FunctionalLossesMSP
msp2msp	msp2msp
names	names
names,MSP-method	names
names<-	names-set
names<-,MSP,character-method	names-set
NDP	NDP
peaks	peaks
peaks,MSP-method	peaks
plotCircos	plotCircos
printInformationSelect	printInformationSelect
sd01_outputXCMS	sd01_outputXCMS
sd02_deconvoluted	sd02_deconvoluted
shinyCircos	shinyCircos
show	show-method
show,MSP-method	show-method
similarityMat	similarityMat
thresholdLinkMatrix	thresholdLinkMatrix
tissue	tissue
truncateName	truncateName
[	extract-methods
[,MSP,numeric-method	extract-methods
