$,matter_df-method	matter_df-class
$,matter_list-method	matter_list-class
$<-,matter_df-method	matter_df-class
$<-,matter_list-method	matter_list-class
%*%,matrix,matter_mat-method	matter_mat-class
%*%,matter,matter-method	matter_mat-class
%*%,matter_mat,matrix-method	matter_mat-class
%*%,matter_matc,numeric-method	matter_mat-class
%*%,matter_matr,numeric-method	matter_mat-class
%*%,numeric,matter_matc-method	matter_mat-class
%*%,numeric,matter_matr-method	matter_mat-class
adata	matter-class
adata,matter-method	matter-class
all,matter-method	summary-stats
any,matter-method	summary-stats
apply	apply
apply,matter_mat-method	apply
apply,sparse_mat-method	apply
apply,virtual_mat-method	apply
Arith	delayed-ops
Arith,matter_arr,matter_arr-method	delayed-ops
Arith,matter_arr,numeric-method	delayed-ops
Arith,matter_fc,matter_fc-method	delayed-ops
Arith,matter_fc,numeric-method	delayed-ops
Arith,matter_matc,matter_matc-method	delayed-ops
Arith,matter_matc,numeric-method	delayed-ops
Arith,matter_matr,matter_matr-method	delayed-ops
Arith,matter_matr,numeric-method	delayed-ops
Arith,matter_vec,matter_vec-method	delayed-ops
Arith,matter_vec,numeric-method	delayed-ops
Arith,numeric,matter_arr-method	delayed-ops
Arith,numeric,matter_fc-method	delayed-ops
Arith,numeric,matter_matc-method	delayed-ops
Arith,numeric,matter_matr-method	delayed-ops
Arith,numeric,matter_vec-method	delayed-ops
as.array,matter_arr-method	matter_arr-class
as.array,matter_vec-method	matter_vec-class
as.data.frame,matter_df-method	matter_df-class
as.list,drle-method	drle-class
as.list,matter_list-method	matter_list-class
as.list,rep_vt-method	rep_vt
as.matrix,matter_mat-method	matter_mat-class
as.matrix,matter_vec-method	matter_vec-class
as.matrix,sparse_mat-method	sparse_mat-class
as.matrix,virtual_mat-method	virtual_mat-class
as.matter	matter-class
as.sparse	sparse_mat-class
as.vector,drle-method	drle-class
as.vector,matter_arr-method	matter_arr-class
as.vector,matter_str-method	matter_str-class
as.vector,matter_vec-method	matter_vec-class
as.vector,rep_vt-method	rep_vt
as.virtual	virtual_mat-class
atomdata	matter-class
atomdata,matter-method	matter-class
atomdata<-	matter-class
atomdata<-,matter-method	matter-class
bigglm	biglm
bigglm,formula,matter_df-method	biglm
bigglm,formula,matter_mat-method	biglm
bigglm.out	matter-utils
biglm	biglm
biglm,formula,matter_df-method	biglm
bsearch	bsearch
c,atoms-method	matter-class
c,drle-method	drle-class
c,matter-method	matter-class
c,matter_vec-method	matter_vec-class
cbind,matter-method	matter_mat-class
checksum	checksum
checksum,matter-method	checksum
chunksize	matter-class
chunksize,matter-method	matter-class
chunksize<-	matter-class
chunksize<-,matter-method	matter-class
chunksize<-,matter_vt-method	matter-class
class:drle	drle-class
class:matter	matter-class
class:matter_arr	matter_arr-class
class:matter_df	matter_df-class
class:matter_fc	matter_fc-class
class:matter_list	matter_list-class
class:matter_mat	matter_mat-class
class:matter_str	matter_str-class
class:matter_vec	matter_vec-class
class:rep_vt	rep_vt
class:sparse_mat	sparse_mat-class
class:virtual_mat	virtual_mat-class
colMeans,matter_mat-method	summary-stats
colSds	summary-stats
colSds,matter_mat-method	summary-stats
colSums,matter_mat-method	summary-stats
colVars	summary-stats
colVars,matter_mat-method	summary-stats
combiner	combiner-method
combiner,sparse_mat-method	sparse_mat-class
combiner<-	combiner-method
combiner<-,sparse_mat-method	sparse_mat-class
Compare	delayed-ops
Compare,character,matter_fc-method	delayed-ops
Compare,factor,matter_fc-method	delayed-ops
Compare,matter_arr,matter_arr-method	delayed-ops
Compare,matter_arr,numeric-method	delayed-ops
Compare,matter_arr,raw-method	delayed-ops
Compare,matter_fc,character-method	delayed-ops
Compare,matter_fc,factor-method	delayed-ops
Compare,matter_fc,matter_fc-method	delayed-ops
Compare,matter_fc,numeric-method	delayed-ops
Compare,matter_matc,matter_matc-method	delayed-ops
Compare,matter_matc,numeric-method	delayed-ops
Compare,matter_matc,raw-method	delayed-ops
Compare,matter_matr,matter_matr-method	delayed-ops
Compare,matter_matr,numeric-method	delayed-ops
Compare,matter_matr,raw-method	delayed-ops
Compare,matter_vec,matter_vec-method	delayed-ops
Compare,matter_vec,numeric-method	delayed-ops
Compare,matter_vec,raw-method	delayed-ops
Compare,numeric,matter_arr-method	delayed-ops
Compare,numeric,matter_fc-method	delayed-ops
Compare,numeric,matter_matc-method	delayed-ops
Compare,numeric,matter_matr-method	delayed-ops
Compare,numeric,matter_vec-method	delayed-ops
Compare,raw,matter_arr-method	delayed-ops
Compare,raw,matter_matc-method	delayed-ops
Compare,raw,matter_matr-method	delayed-ops
Compare,raw,matter_vec-method	delayed-ops
convert_datamode	matter-utils
crossprod,ANY,matter-method	matter_mat-class
crossprod,matter,ANY-method	matter_mat-class
data:matter_ex	matter-utils
data:matter_msi	matter-utils
data:matter_sim	matter-utils
datamode	matter-class
datamode,atoms-method	matter-class
datamode,matter-method	matter-class
datamode<-	matter-class
datamode<-,atoms-method	matter-class
datamode<-,matter-method	matter-class
datamode<-,matter_vt-method	matter-class
datamode<-,sparse_mat-method	sparse_mat-class
datamode<-,virtual_mat-method	virtual_mat-class
dim,atoms-method	matter-class
dim,matter-method	matter-class
dim<-,matter-method	matter-class
dim<-,matter_arr-method	matter_arr-class
dim<-,matter_vec-method	matter_vec-class
dimnames,matter-method	matter-class
dimnames<-,matter,ANY-method	matter-class
dimnames<-,matter_tbl,ANY-method	matter_df-class
drle	drle-class
drle-class	drle-class
exp,matter_arr-method	delayed-ops
exp,matter_fc-method	delayed-ops
exp,matter_mat-method	delayed-ops
exp,matter_vec-method	delayed-ops
filemode	matter-class
filemode,matter-method	matter-class
filemode<-	matter-class
filemode<-,matter-method	matter-class
filemode<-,matter_vt-method	matter-class
head,matter_tbl-method	matter_df-class
hex2raw	uuid
is.drle	drle-class
is.matter	matter-class
is.sparse	sparse_mat-class
is.virtual	virtual_mat-class
keys	keys-method
keys,sparse_mat-method	sparse_mat-class
keys<-	keys-method
keys<-,sparse_mat-method	sparse_mat-class
keys<-,sparse_matc-method	sparse_mat-class
keys<-,sparse_matr-method	sparse_mat-class
length,atoms-method	matter-class
length,drle-method	drle-class
length,matter-method	matter-class
length,rep_vt-method	rep_vt
length<-,matter-method	matter-class
lengths,matter_list-method	matter_list-class
lengths,matter_str-method	matter_str-class
levels,matter_fc-method	matter_fc-class
levels<-,matter_fc-method	matter_fc-class
lm.prof	matter-utils
log,matter_arr,numeric-method	delayed-ops
log,matter_arr-method	delayed-ops
log,matter_fc,numeric-method	delayed-ops
log,matter_fc-method	delayed-ops
log,matter_matc,numeric-method	delayed-ops
log,matter_matc-method	delayed-ops
log,matter_matr,numeric-method	delayed-ops
log,matter_matr-method	delayed-ops
log,matter_vec,numeric-method	delayed-ops
log,matter_vec-method	delayed-ops
log10,matter_arr-method	delayed-ops
log10,matter_fc-method	delayed-ops
log10,matter_mat-method	delayed-ops
log10,matter_vec-method	delayed-ops
log2,matter_arr-method	delayed-ops
log2,matter_fc-method	delayed-ops
log2,matter_mat-method	delayed-ops
log2,matter_vec-method	delayed-ops
make_datamode	matter-utils
matter	matter-class
matter-class	matter-class
matter-utils	matter-utils
matter_arr	matter_arr-class
matter_arr-class	matter_arr-class
matter_df	matter_df-class
matter_df-class	matter_df-class
matter_ex	matter-utils
matter_fc	matter_fc-class
matter_fc-class	matter_fc-class
matter_list	matter_list-class
matter_list-class	matter_list-class
matter_mat	matter_mat-class
matter_mat-class	matter_mat-class
matter_matc	matter_mat-class
matter_matc-class	matter_mat-class
matter_matr	matter_mat-class
matter_matr-class	matter_mat-class
matter_msi	matter-utils
matter_sim	matter-utils
matter_str	matter_str-class
matter_str-class	matter_str-class
matter_vec	matter_vec-class
matter_vec-class	matter_vec-class
max,matter-method	summary-stats
mean	summary-stats
mean,matter-method	summary-stats
mem	profmem
min,matter-method	summary-stats
msi.prof	matter-utils
names,matter-method	matter-class
names<-,matter-method	matter-class
names<-,matter_tbl-method	matter_df-class
paths	matter-class
paths,matter-method	matter-class
paths<-	matter-class
paths<-,matter-method	matter-class
paths<-,matter_vt-method	matter-class
pca.prof	matter-utils
prcomp	prcomp
prcomp,matter_mat-method	prcomp
prcomp.out	matter-utils
prod,matter-method	summary-stats
profmem	profmem
range,matter-method	summary-stats
raw2hex	uuid
rbind,matter-method	matter_mat-class
readonly	matter-class
readonly,matter-method	matter-class
readonly<-	matter-class
readonly<-,matter-method	matter-class
readonly<-,matter_vt-method	matter-class
rep_vt	rep_vt
rep_vt-class	rep_vt
rowMeans,matter_mat-method	summary-stats
rowSds	summary-stats
rowSds,matter_mat-method	summary-stats
rowSums,matter_mat-method	summary-stats
rowVars	summary-stats
rowVars,matter_mat-method	summary-stats
scale	scale
scale,matter_mat-method	scale
scale.matter	scale
sd	summary-stats
sd,matter-method	summary-stats
sizeof	matter-utils
sparse_mat	sparse_mat-class
sparse_mat-class	sparse_mat-class
sparse_matc	sparse_mat-class
sparse_matc-class	sparse_mat-class
sparse_matr	sparse_mat-class
sparse_matr-class	sparse_mat-class
struct	struct
sum,matter-method	summary-stats
Summary	summary-stats
t,matter_matc-method	matter_mat-class
t,matter_matr-method	matter_mat-class
t,matter_vec-method	matter_vec-class
t,sparse_matc-method	sparse_mat-class
t,sparse_matr-method	sparse_mat-class
t,virtual_mat-method	virtual_mat-class
t.matter	matter_mat-class
tail,matter_tbl-method	matter_df-class
tcrossprod,ANY,matter-method	matter_mat-class
tcrossprod,matter,ANY-method	matter_mat-class
tolerance	tolerance-method
tolerance,sparse_mat-method	sparse_mat-class
tolerance<-	tolerance-method
tolerance<-,sparse_mat-method	sparse_mat-class
uuid	uuid
var	summary-stats
var,matter-method	summary-stats
virtual_mat	virtual_mat-class
virtual_mat-class	virtual_mat-class
virtual_matc	virtual_mat-class
virtual_matc-class	virtual_mat-class
virtual_matr	virtual_mat-class
virtual_matr-class	virtual_mat-class
vm_used	matter-utils
which,matter-method	matter-class
widest_datamode	matter-utils
[,atoms,ANY,ANY,ANY-method	matter-class
[,atoms,ANY,missing,ANY-method	matter-class
[,atoms,missing,ANY,ANY-method	matter-class
[,drle,ANY,missing,missing-method	drle-class
[,drle,missing,missing,missing-method	drle-class
[,matter_arr,ANY,ANY,ANY-method	matter_arr-class
[,matter_arr-method	matter_arr-class
[,matter_df,ANY,ANY,ANY-method	matter_df-class
[,matter_df,ANY,ANY,NULL-method	matter_df-class
[,matter_df,ANY,missing,ANY-method	matter_df-class
[,matter_df,ANY,missing,NULL-method	matter_df-class
[,matter_df,missing,ANY,ANY-method	matter_df-class
[,matter_df,missing,ANY,NULL-method	matter_df-class
[,matter_df,missing,missing,ANY-method	matter_df-class
[,matter_df-method	matter_df-class
[,matter_fc,ANY,missing,ANY-method	matter_fc-class
[,matter_fc,ANY,missing,NULL-method	matter_fc-class
[,matter_fc,missing,missing,ANY-method	matter_fc-class
[,matter_fc-method	matter_fc-class
[,matter_list,ANY,ANY,ANY-method	matter_list-class
[,matter_list,ANY,ANY,NULL-method	matter_list-class
[,matter_list,ANY,missing,ANY-method	matter_list-class
[,matter_list,ANY,missing,NULL-method	matter_list-class
[,matter_list,missing,missing,ANY-method	matter_list-class
[,matter_list-method	matter_list-class
[,matter_mat,ANY,ANY,ANY-method	matter_mat-class
[,matter_mat,ANY,ANY,NULL-method	matter_mat-class
[,matter_mat,ANY,missing,ANY-method	matter_mat-class
[,matter_mat,ANY,missing,NULL-method	matter_mat-class
[,matter_mat,missing,ANY,ANY-method	matter_mat-class
[,matter_mat,missing,ANY,NULL-method	matter_mat-class
[,matter_mat,missing,missing,ANY-method	matter_mat-class
[,matter_mat-method	matter_mat-class
[,matter_str,ANY,ANY,ANY-method	matter_str-class
[,matter_str,ANY,ANY,NULL-method	matter_str-class
[,matter_str,ANY,missing,ANY-method	matter_str-class
[,matter_str,ANY,missing,NULL-method	matter_str-class
[,matter_str,missing,missing,ANY-method	matter_str-class
[,matter_str-method	matter_str-class
[,matter_vec,ANY,missing,ANY-method	matter_vec-class
[,matter_vec,ANY,missing,NULL-method	matter_vec-class
[,matter_vec,missing,missing,ANY-method	matter_vec-class
[,matter_vec-method	matter_vec-class
[,rep_vt,ANY,missing,missing-method	rep_vt
[,rep_vt,missing,missing,missing-method	rep_vt
[,sparse_mat,ANY,ANY,ANY-method	sparse_mat-class
[,sparse_mat,ANY,ANY,NULL-method	sparse_mat-class
[,sparse_mat,ANY,missing,ANY-method	sparse_mat-class
[,sparse_mat,ANY,missing,NULL-method	sparse_mat-class
[,sparse_mat,missing,ANY,ANY-method	sparse_mat-class
[,sparse_mat,missing,ANY,NULL-method	sparse_mat-class
[,sparse_mat,missing,missing,ANY-method	sparse_mat-class
[,sparse_mat-method	sparse_mat-class
[,virtual_mat,ANY,ANY,ANY-method	virtual_mat-class
[,virtual_mat,ANY,ANY,NULL-method	virtual_mat-class
[,virtual_mat,ANY,missing,ANY-method	virtual_mat-class
[,virtual_mat,ANY,missing,NULL-method	virtual_mat-class
[,virtual_mat,missing,ANY,ANY-method	virtual_mat-class
[,virtual_mat,missing,ANY,NULL-method	virtual_mat-class
[,virtual_mat,missing,missing,ANY-method	virtual_mat-class
[,virtual_mat-method	virtual_mat-class
[<-,matter_arr,ANY,ANY,ANY-method	matter_arr-class
[<-,matter_arr-method	matter_arr-class
[<-,matter_df,ANY,ANY,ANY-method	matter_df-class
[<-,matter_df,ANY,missing,ANY-method	matter_df-class
[<-,matter_df,missing,ANY,ANY-method	matter_df-class
[<-,matter_df,missing,missing,ANY-method	matter_df-class
[<-,matter_df-method	matter_df-class
[<-,matter_fc,ANY,missing,ANY-method	matter_fc-class
[<-,matter_fc,missing,missing,ANY-method	matter_fc-class
[<-,matter_fc-method	matter_fc-class
[<-,matter_list,ANY,ANY,ANY-method	matter_list-class
[<-,matter_list,ANY,missing,ANY-method	matter_list-class
[<-,matter_list,missing,missing,ANY-method	matter_list-class
[<-,matter_list-method	matter_list-class
[<-,matter_mat,ANY,ANY,ANY-method	matter_mat-class
[<-,matter_mat,ANY,missing,ANY-method	matter_mat-class
[<-,matter_mat,missing,ANY,ANY-method	matter_mat-class
[<-,matter_mat,missing,missing,ANY-method	matter_mat-class
[<-,matter_mat-method	matter_mat-class
[<-,matter_str,ANY,ANY,ANY-method	matter_str-class
[<-,matter_str,ANY,missing,ANY-method	matter_str-class
[<-,matter_str,missing,missing,ANY-method	matter_str-class
[<-,matter_str-method	matter_str-class
[<-,matter_vec,ANY,missing,ANY-method	matter_vec-class
[<-,matter_vec,missing,missing,ANY-method	matter_vec-class
[<-,matter_vec-method	matter_vec-class
[<-,sparse_mat,ANY,ANY,ANY-method	sparse_mat-class
[<-,sparse_mat,ANY,missing,ANY-method	sparse_mat-class
[<-,sparse_mat,missing,ANY,ANY-method	sparse_mat-class
[<-,sparse_mat,missing,missing,ANY-method	sparse_mat-class
[<-,sparse_mat-method	sparse_mat-class
[[,atoms,ANY,ANY-method	matter-class
[[,atoms-method	matter-class
[[,matter_df,ANY,missing-method	matter_df-class
[[,matter_list,ANY,missing-method	matter_list-class
[[,matter_str,ANY,missing-method	matter_str-class
[[,rep_vt,ANY,ANY-method	rep_vt
[[<-,matter_df,ANY,missing-method	matter_df-class
[[<-,matter_list,ANY,missing-method	matter_list-class
[[<-,matter_str,ANY,missing-method	matter_str-class
