# CHANGES IN VERSION 2.12.00
(GitHub master branch/BC 3.15 RC)

## NEW FUNCTIONS
- `gtMarkers`, `prepAscat`, `prepAscat_t`, `segmentLogR` provides interface to copy number analysis with ASCAT. 
- `plotMosdepth` and `plotMosdepth_t` processes output generated by Mosdepth and performs copy number analysis with DNAcopy
- `cancerhotspotsAggr` Aggregates `cancerhotspots` reports

## ENHANCEMENTS
- Added support for plotting adjusted p-values in `somaticInteractions`. Issue: [813](https://github.com/PoisonAlien/maftools/issues/813)
- Added support for the protein structure `BECN2` Issue: [696](https://github.com/PoisonAlien/maftools/issues/696)
