IsoGeneGUI: A Graphical User Interface for analysis of dose-response microarray experiments.
1. About the IsoGeneGUI package
2. The statistics for testing for monotonic trend
3. IsoGeneGUI input files
4. Data exploration
5. Analysis:
a. Likelihood ratio test statistic (E2)
b. Permutation
c. Significance Analysis of Microarrays (SAM)
d. GORIC
6. Clustering:
a. ORCME
b. ORIClust
7. Example Data: Dopamine Study
Any questions, please contact: setia.pramana@ki.se , hafidztio@yahoo.com