# Interactive Differential Expression AnaLysis

## Documentation for package ‘ideal’ version 1.2.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

ideal-pkg-package | ideal: Interactive Differential Expression Analysis
deseqresult2DEgenes | Generate a tidy table with the DE genes from the results of DESeq
deseqresult2tbl | Generate a tidy table with the results of DESeq
ggplotCounts | Plot normalized counts for a gene
goseqTable | Extract functional terms enriched in the DE genes, based on goseq
ideal | ideal: Interactive Differential Expression Analysis
ideal-pkg | ideal: Interactive Differential Expression Analysis
plot_ma | MA-plot from base means and log fold changes
plot_volcano | Volcano plot for log fold changes and log p-values
sepguesser | Make an educated guess on the separator character