# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /Users/runner/work/bioconda-recipes/bioconda-recipes/recipes/bioconductor-ggpa, last modified Sun Dec  3 14:45:54 2023
# ------------------------------------------------

package:
  name: bioconductor-ggpa
  version: 1.14.0
source:
  md5: 5c50ef4040a18ac94848d7c42484d28d
  url:
    - https://bioarchive.galaxyproject.org/GGPA_1.14.0.tar.gz
    - https://bioconductor.org/packages/3.18/bioc/src/contrib/Archive/GGPA/GGPA_1.14.0.tar.gz
    - https://bioconductor.org/packages/3.18/bioc/src/contrib/GGPA_1.14.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-ggpa/bioconductor-ggpa_1.14.0_src_all.tar.gz
build:
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  run_exports: bioconductor-ggpa >=1.14.0,<2.0a0
  string: r43hc0ef7c4_0
requirements:
  build:
    - ca-certificates 2023.11.17 h8857fd0_0
    - cctools_osx-64 973.0.1 habff3f6_15
    - clang 15.0.7 hac416ee_4
    - clang-15 15.0.7 default_h6b1ee41_4
    - clang_impl_osx-64 15.0.7 h03d6864_6
    - clang_osx-64 15.0.7 hb91bd55_6
    - clangxx 15.0.7 default_h6b1ee41_4
    - clangxx_impl_osx-64 15.0.7 h3d2d1bf_6
    - clangxx_osx-64 15.0.7 h655633e_6
    - compiler-rt 15.0.7 ha38d28d_2
    - compiler-rt_osx-64 15.0.7 ha38d28d_2
    - icu 73.2 hf5e326d_0
    - ld64_osx-64 609 h0fd476b_15
    - libclang-cpp15 15.0.7 default_h6b1ee41_4
    - libcxx 16.0.6 hd57cbcb_0
    - libiconv 1.17 hac89ed1_0
    - libllvm15 15.0.7 hbedff68_4
    - libxml2 2.12.1 hc0ae0f7_0
    - libzlib 1.2.13 h8a1eda9_5
    - llvm-tools 15.0.7 hbedff68_4
    - make 4.3 h22f3db7_1
    - openssl 3.2.0 hd75f5a5_1
    - sigtool 0.1.3 h88f4db0_0
    - tapi 1100.0.11 h9ce4665_0
    - xz 5.2.6 h775f41a_0
    - zstd 1.5.5 h829000d_0
  host:
    - _r-mutex 1.0.1 anacondar_1
    - bwidget 1.9.14 h694c41f_1
    - bzip2 1.0.8 h10d778d_5
    - c-ares 1.23.0 h10d778d_0
    - ca-certificates 2023.11.17 h8857fd0_0
    - cairo 1.18.0 h99e66fa_0
    - cctools_osx-64 973.0.1 ha1c5b94_15
    - clang 16.0.6 hac416ee_3
    - clang-16 16.0.6 default_h6b1ee41_3
    - clang_impl_osx-64 16.0.6 h8787910_6
    - clang_osx-64 16.0.6 hb91bd55_6
    - clangxx 16.0.6 default_h6b1ee41_3
    - clangxx_impl_osx-64 16.0.6 h1b7723c_6
    - clangxx_osx-64 16.0.6 h2fff7d5_6
    - compiler-rt 16.0.6 ha38d28d_2
    - compiler-rt_osx-64 16.0.6 ha38d28d_2
    - curl 8.4.0 h726d00d_0
    - expat 2.5.0 hf0c8a7f_1
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 h77eed37_1
    - fontconfig 2.14.2 h5bb23bf_0
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 h60636b9_2
    - fribidi 1.0.10 hbcb3906_0
    - gettext 0.21.1 h8a4c099_0
    - gfortran_impl_osx-64 12.3.0 h54fd467_1
    - gfortran_osx-64 12.3.0 h18f7dce_1
    - gmp 6.3.0 h93d8f39_0
    - graphite2 1.3.13 h2e338ed_1001
    - harfbuzz 8.3.0 hf45c392_0
    - icu 73.2 hf5e326d_0
    - isl 0.25 hb486fe8_0
    - krb5 1.21.2 hb884880_0
    - ld64_osx-64 609 ha20a434_15
    - lerc 4.0.0 hb486fe8_0
    - libblas 3.9.0 5_h0661a58_netlib
    - libclang-cpp16 16.0.6 default_h6b1ee41_3
    - libcurl 8.4.0 h726d00d_0
    - libcxx 16.0.6 hd57cbcb_0
    - libdeflate 1.19 ha4e1b8e_0
    - libedit 3.1.20191231 h0678c8f_2
    - libev 4.33 haf1e3a3_1
    - libexpat 2.5.0 hf0c8a7f_1
    - libffi 3.4.2 h0d85af4_5
    - libgfortran 5.0.0 13_2_0_h97931a8_1
    - libgfortran-devel_osx-64 12.3.0 h0b6f5ec_1
    - libgfortran5 13.2.0 h2873a65_1
    - libglib 2.78.1 h198397b_1
    - libiconv 1.17 hac89ed1_0
    - libjpeg-turbo 3.0.0 h0dc2134_1
    - liblapack 3.9.0 5_h0661a58_netlib
    - libllvm16 16.0.6 hbedff68_3
    - libnghttp2 1.58.0 h64cf6d3_0
    - libpng 1.6.39 ha978bb4_0
    - libssh2 1.11.0 hd019ec5_0
    - libtiff 4.6.0 h684deea_2
    - libwebp-base 1.3.2 h0dc2134_0
    - libxml2 2.12.1 hc0ae0f7_0
    - libzlib 1.2.13 h8a1eda9_5
    - llvm-openmp 17.0.6 hb6ac08f_0
    - llvm-tools 16.0.6 hbedff68_3
    - make 4.3 h22f3db7_1
    - mpc 1.3.1 h81bd1dd_0
    - mpfr 4.2.1 h0c69b56_0
    - ncurses 6.4 h93d8f39_2
    - openssl 3.2.0 hd75f5a5_1
    - pango 1.50.14 h19c1c8a_2
    - pcre2 10.42 h0ad2156_0
    - pixman 0.42.2 he965462_0
    - r-assertthat 0.2.1 r43hc72bb7e_4
    - r-backports 1.4.1 r43h6dc245f_2
    - r-base 4.3.2 h8eaf9e6_1
    - r-bit 4.0.5 r43h6dc245f_1
    - r-bit64 4.0.5 r43h6dc245f_2
    - r-broom 1.0.5 r43hc72bb7e_1
    - r-broom.helpers 1.14.0 r43hc72bb7e_0
    - r-cli 3.6.1 r43hac7d2d5_1
    - r-clipr 0.8.0 r43hc72bb7e_2
    - r-coda 0.19_4 r43hc72bb7e_2
    - r-colorspace 2.1_0 r43h6dc245f_1
    - r-cpp11 0.4.7 r43hc72bb7e_0
    - r-crayon 1.5.2 r43hc72bb7e_2
    - r-dplyr 1.1.4 r43h64b2c41_0
    - r-ellipsis 0.3.2 r43h6dc245f_2
    - r-fansi 1.0.5 r43hb2c329c_0
    - r-farver 2.1.1 r43hac7d2d5_2
    - r-forcats 1.0.0 r43hc72bb7e_1
    - r-generics 0.1.3 r43hc72bb7e_2
    - r-ggally 2.2.0 r43hc72bb7e_0
    - r-ggplot2 3.4.4 r43hc72bb7e_0
    - r-ggstats 0.5.1 r43hc72bb7e_0
    - r-glue 1.6.2 r43h6dc245f_2
    - r-gtable 0.3.4 r43hc72bb7e_0
    - r-haven 2.5.4 r43h64b2c41_0
    - r-hms 1.1.3 r43hc72bb7e_1
    - r-isoband 0.2.7 r43hac7d2d5_2
    - r-labeling 0.4.3 r43hc72bb7e_0
    - r-labelled 2.12.0 r43hc72bb7e_0
    - r-lattice 0.22_5 r43hb2c329c_0
    - r-lifecycle 1.0.4 r43hc72bb7e_0
    - r-magrittr 2.0.3 r43h6dc245f_2
    - r-mass 7.3_60 r43h6dc245f_1
    - r-matrix 1.6_4 r43h39411cf_0
    - r-matrixstats 1.1.0 r43hb2c329c_0
    - r-mgcv 1.9_0 r43h9c380c6_0
    - r-munsell 0.5.0 r43hc72bb7e_1006
    - r-network 1.18.1 r43h6dc245f_1
    - r-nlme 3.1_164 r43hed23af9_0
    - r-patchwork 1.1.3 r43hc72bb7e_0
    - r-pillar 1.9.0 r43hc72bb7e_1
    - r-pkgconfig 2.0.3 r43hc72bb7e_3
    - r-plyr 1.8.9 r43hac7d2d5_0
    - r-prettyunits 1.2.0 r43hc72bb7e_0
    - r-progress 1.2.2 r43hc72bb7e_4
    - r-purrr 1.0.2 r43h6dc245f_0
    - r-r6 2.5.1 r43hc72bb7e_2
    - r-rcolorbrewer 1.1_3 r43h785f33e_2
    - r-rcpp 1.0.11 r43hac7d2d5_0
    - r-rcpparmadillo 0.12.6.4.0 r43he9b8800_0
    - r-readr 2.1.4 r43hac7d2d5_1
    - r-rlang 1.1.2 r43h64b2c41_0
    - r-rle 0.9.2 r43h6dc245f_2
    - r-scales 1.3.0 r43hc72bb7e_0
    - r-sna 2.7_1 r43h6dc245f_1
    - r-statnet.common 4.9.0 r43h6dc245f_1
    - r-stringi 1.8.2 r43hb55eabf_0
    - r-stringr 1.5.1 r43h785f33e_0
    - r-tibble 3.2.1 r43h6dc245f_2
    - r-tidyr 1.3.0 r43hac7d2d5_1
    - r-tidyselect 1.2.0 r43hbe3e9c8_1
    - r-tzdb 0.4.0 r43hac7d2d5_1
    - r-utf8 1.2.4 r43hb2c329c_0
    - r-vctrs 0.6.5 r43h64b2c41_0
    - r-viridislite 0.4.2 r43hc72bb7e_1
    - r-vroom 1.6.4 r43hac7d2d5_0
    - r-withr 2.5.2 r43hc72bb7e_0
    - readline 8.2 h9e318b2_1
    - sigtool 0.1.3 h88f4db0_0
    - tapi 1100.0.11 h9ce4665_0
    - tk 8.6.13 h1abcd95_1
    - tktable 2.10 ha166976_5
    - xz 5.2.6 h775f41a_0
    - zlib 1.2.13 h8a1eda9_5
    - zstd 1.5.5 h829000d_0
  run:
    - __osx >=10.9
    - libblas >=3.9.0,<4.0a0
    - libcxx >=15.0.7
    - liblapack >=3.9.0,<4.0a0
    - r-base >=4.3,<4.4.0a0
    - r-ggally
    - r-matrixstats
    - r-network
    - r-rcpp >=0.11.3
    - r-rcpparmadillo
    - r-scales
    - r-sna
test:
  commands:
    - $R -e "library('GGPA')"
about:
  description: Genome-wide association studies (GWAS) is a widely used tool for identification
    of genetic variants associated with phenotypes and diseases, though complex diseases
    featuring many genetic variants with small effects present difficulties for traditional
    these studies. By leveraging pleiotropy, the statistical power of a single GWAS
    can be increased. This package provides functions for fitting graph-GPA, a statistical
    framework to prioritize GWAS results by integrating pleiotropy. 'GGPA' package
    provides user-friendly interface to fit graph-GPA models, implement association
    mapping, and generate a phenotype graph.
  home: https://bioconductor.org/packages/3.18/bioc/html/GGPA.html
  license: GPL (>= 2)
  license_file: /opt/mambaforge/envs/bioconda/conda-bld/bioconductor-ggpa_1701617766732/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeh/lib/R/share/licenses/GPL-3
  summary: 'graph-GPA: A graphical model for prioritizing GWAS results and investigating
    pleiotropic architecture'
extra:
  copy_test_source_files: true
  final: true
